FFCP PHASE1:Mm9::chr18:15309936..15309940,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=106931|HGNC=|UniProt=Q5M956|association_with_transcript=14bp_to_ENSMUST00000025992,NM_134112,uc008edo.1_5end|description=CAGE_peak_3_at_Kctd1_5end|id=chr18:15309936..15309940,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000107,7.08e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!2.24e-10!94;UBERON:0007811!6.13e-08!86;UBERON:0004121!9.70e-08!102;UBERON:0000924!9.70e-08!102;UBERON:0006601!9.70e-08!102;UBERON:0001017!2.59e-07!73;UBERON:0005743!2.59e-07!73;UBERON:0002346!2.60e-07!71;UBERON:0003075!2.60e-07!71;UBERON:0007284!2.60e-07!71;UBERON:0003056!6.49e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000153,5.58e-15,43;UBERON:0007811,1.70e-11,36;UBERON:0002410,7.08e-09,9;UBERON:0000033,3.68e-07,13;UBERON:0004121,9.37e-07,95;UBERON:0000924,9.37e-07,95;UBERON:0006601,9.37e-07,95;UBERON:0000010,1.00e-06,11|phase1_expression=3.36312578920067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,2.18440092641948,2.35079810225042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0.439372365468944,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,2.63011399117477,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0.768436610643109,0.725827286159344,0.270011876663381,0.630974884054146,1.14260393761521,1.10434270475807,0.244981598429908,0.287536413054709,2.75765635983006,0,0.893811366596314,0.46081959976873,1.31886287730194,1.73826522844578,1.04182674111352,0.279182999001381,0,0.61119299110724,1.76777151284201,1.85083185038834,2.05039390407831,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,2.67602497575693,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.11418387971906,0.517875767294343,0.593768556259299,1.04091196059682,0,0.461230994512117,0.60289056221049,0.587943535678524,0.251333182659351,0,0,0.884610551949874,0.323533699894818,0.883366073841574,0.484875253135222,0,0.292780797011547,0.628340120440365,0,4.91242010474273,2.99951365496704,4.44745794755726,0.898743836428936,2.28750301409313,2.1361239859187,1.39059456153821,1.53429274398198,1.24672826735736,1.29793010454206,0.611036183101898,0.746441823660558,0.505445516867349,0.631325567659422,6.63614259109789,2.29902104433473,3.06105620669094,2.10986744970001,3.12967896096108,3.84341160854549,1.87403449119458,2.58703370739016,6.89817577385095,5.8622884852024,4.75068035242662,1.7535658594206,2.50242524303038,0.696504333044333,1.85203922767149,0.796137067273973,2.1066395619397,3.60287069960601,5.39910648851626,1.65700618028402,0.703578179943289,1.62055855314913,0.710234206755631,0.590292695242212,0.771335564436891,0.465067889500816,0.268273401399619,0.233530684734339,0,0,0.0810688095458557,0,0.219550115291051,0,2.10289948564127,1.23485534855141,0,0,1.06644125267617,1.16118335930219,0.77320476793256,0.403367049246685,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0.502670417600539,0,0.38992817423824,0,0,0,1.51734320762465,1.82797620175566,2.25415471346161,1.62921062276251,1.35766741017338,2.31448205638051,2.46622494784603,0.885660887877613,2.98297582898612,1.85095745882701,0,0.166845105716094,0.589676985339609,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,1.51593129416388,0.977789858652155,1.01847051465113,0.234690248288502,1.34005005953453,0.476087281772027,0,0.157635144106191,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0,0,0.234423373184406,0,0,4.41711507182759,4.29482618726302,7.10897212518236,5.73525115086125,2.67358408898873,3.96307143104365,4.04810701674894,2.63030272120181,2.37172666767914,3.21321316421807,2.12910127812403,0.35613120733451,0.651547837414304,0.329940245945071,0,1.69946445308487,0.302323556964751,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,3.78128297465751,1.03486947026204,2.14337035031592,0.709360934569094,1.07021290561242,1.31639216481697,0.608929898229199,0,0,0.220528398054962,0,0.322928853391811,0.180938774784468,0.477489376012546,0.328281799490123,0,0.370850604021019,0.341741761595705,0.206386867963223,0,0.376736914009382,0,0,7.47905091972963,5.318155188299,3.04039942369732,0,1.26534397432454,1.62655573701479,0.972048067396211,0.209088296014469,0.436725127492355,0,0.330613822901344,0,0,3.10669656543463,0,1.64468200648377,0.66183396182839,1.36115831840833,0.774958940866387,0.844780627453891,1.5256441023948,1.5624526181274,1.15345278868282,0.483168241652012,0,3.79213344753814,2.22997736819181,5.6491026440655,4.80707045017842,2.68540043501222,4.17230845040656,2.40390899039938,3.10148007066612,3.53382574818517,3.88654713940499,3.52891647978942,4.77543615624787,4.13710919053417,8.18138315270983,0,0.221985953374065,1.34570784914214,0.671538465456314,0,0.750729901804728,1.28206136987086,0.214368379079066,0,1.12950368523413,1.38097570952153,4.58316410751517,0.859265911718438,0,0,0.675022500231806,0.45032120322422,0.906284817968409,0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| ||
|EntrezGene=106931 | |||
|HGNC= | |||
|UniProt=Q5M956 | |||
|association_with_transcript=14bp_to_ENSMUST00000025992,NM_134112,uc008edo.1_5end | |||
|description=CAGE_peak_3_at_Kctd1_5end | |||
|id=chr18:15309936..15309940,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,7.08e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.24e-10!94;UBERON:0007811!6.13e-08!86;UBERON:0004121!9.70e-08!102;UBERON:0000924!9.70e-08!102;UBERON:0006601!9.70e-08!102;UBERON:0001017!2.59e-07!73;UBERON:0005743!2.59e-07!73;UBERON:0002346!2.60e-07!71;UBERON:0003075!2.60e-07!71;UBERON:0007284!2.60e-07!71;UBERON:0003056!6.49e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,5.58e-15,43;UBERON:0007811,1.70e-11,36;UBERON:0002410,7.08e-09,9;UBERON:0000033,3.68e-07,13;UBERON:0004121,9.37e-07,95;UBERON:0000924,9.37e-07,95;UBERON:0006601,9.37e-07,95;UBERON:0000010,1.00e-06,11 | |||
|phase1_expression=3.36312578920067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,2.18440092641948,2.35079810225042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0.439372365468944,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,2.63011399117477,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0.768436610643109,0.725827286159344,0.270011876663381,0.630974884054146,1.14260393761521,1.10434270475807,0.244981598429908,0.287536413054709,2.75765635983006,0,0.893811366596314,0.46081959976873,1.31886287730194,1.73826522844578,1.04182674111352,0.279182999001381,0,0.61119299110724,1.76777151284201,1.85083185038834,2.05039390407831,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,2.67602497575693,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.11418387971906,0.517875767294343,0.593768556259299,1.04091196059682,0,0.461230994512117,0.60289056221049,0.587943535678524,0.251333182659351,0,0,0.884610551949874,0.323533699894818,0.883366073841574,0.484875253135222,0,0.292780797011547,0.628340120440365,0,4.91242010474273,2.99951365496704,4.44745794755726,0.898743836428936,2.28750301409313,2.1361239859187,1.39059456153821,1.53429274398198,1.24672826735736,1.29793010454206,0.611036183101898,0.746441823660558,0.505445516867349,0.631325567659422,6.63614259109789,2.29902104433473,3.06105620669094,2.10986744970001,3.12967896096108,3.84341160854549,1.87403449119458,2.58703370739016,6.89817577385095,5.8622884852024,4.75068035242662,1.7535658594206,2.50242524303038,0.696504333044333,1.85203922767149,0.796137067273973,2.1066395619397,3.60287069960601,5.39910648851626,1.65700618028402,0.703578179943289,1.62055855314913,0.710234206755631,0.590292695242212,0.771335564436891,0.465067889500816,0.268273401399619,0.233530684734339,0,0,0.0810688095458557,0,0.219550115291051,0,2.10289948564127,1.23485534855141,0,0,1.06644125267617,1.16118335930219,0.77320476793256,0.403367049246685,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0.502670417600539,0,0.38992817423824,0,0,0,1.51734320762465,1.82797620175566,2.25415471346161,1.62921062276251,1.35766741017338,2.31448205638051,2.46622494784603,0.885660887877613,2.98297582898612,1.85095745882701,0,0.166845105716094,0.589676985339609,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,1.51593129416388,0.977789858652155,1.01847051465113,0.234690248288502,1.34005005953453,0.476087281772027,0,0.157635144106191,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0,0,0.234423373184406,0,0,4.41711507182759,4.29482618726302,7.10897212518236,5.73525115086125,2.67358408898873,3.96307143104365,4.04810701674894,2.63030272120181,2.37172666767914,3.21321316421807,2.12910127812403,0.35613120733451,0.651547837414304,0.329940245945071,0,1.69946445308487,0.302323556964751,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,3.78128297465751,1.03486947026204,2.14337035031592,0.709360934569094,1.07021290561242,1.31639216481697,0.608929898229199,0,0,0.220528398054962,0,0.322928853391811,0.180938774784468,0.477489376012546,0.328281799490123,0,0.370850604021019,0.341741761595705,0.206386867963223,0,0.376736914009382,0,0,7.47905091972963,5.318155188299,3.04039942369732,0,1.26534397432454,1.62655573701479,0.972048067396211,0.209088296014469,0.436725127492355,0,0.330613822901344,0,0,3.10669656543463,0,1.64468200648377,0.66183396182839,1.36115831840833,0.774958940866387,0.844780627453891,1.5256441023948,1.5624526181274,1.15345278868282,0.483168241652012,0,3.79213344753814,2.22997736819181,5.6491026440655,4.80707045017842,2.68540043501222,4.17230845040656,2.40390899039938,3.10148007066612,3.53382574818517,3.88654713940499,3.52891647978942,4.77543615624787,4.13710919053417,8.18138315270983,0,0.221985953374065,1.34570784914214,0.671538465456314,0,0.750729901804728,1.28206136987086,0.214368379079066,0,1.12950368523413,1.38097570952153,4.58316410751517,0.859265911718438,0,0,0.675022500231806,0.45032120322422,0.906284817968409,0.51776031175182,3.21740777510948,1.59609949360412,1.53660245178721,2.18796045361465,0.628839487883947,0.367687016900028,0.666740183404846,0,0.64183841918363,0.505394423527595,1.01391719956096,0.754505365544305,1.03005658216871,1.08842759088278,1.26358031702349,0.952587382566147,0.579421629724277,0.38581844092741,0.412085900803307,0.441596760403192,1.02860775715625,0.354951612318675,0.715308569841963,0.726732083161643,0.658765662907314,0.169229215783353,0.365855945745545,0.526139422875686,0.814824683075171,0,0.949080144993393,0.689531376628944,0.409231043169689,0.154936841185966,0.964533054905707,0.749431733813838,0.467863216890817,0,0.191288332068843,0,0.463735671240843 | |||
|short_description=p3@Kctd1 | |||
}} |
Revision as of 15:44, 13 September 2013
Short description: | p3@Kctd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Kctd1_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENSMUST00000025992, NM_134112, uc008edo.1_5end |
EntrezGene: | Kctd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 7.08e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
anterior region of body | 5.58e-15 | 43 |
craniocervical region | 1.70e-11 | 36 |
autonomic nervous system | 7.08e-09 | 9 |
head | 3.68e-07 | 13 |
ectoderm-derived structure | 9.37e-07 | 95 |
ectoderm | 9.37e-07 | 95 |
presumptive ectoderm | 9.37e-07 | 95 |
peripheral nervous system | 1.00e-06 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.