FFCP PHASE1:Mm9::chr7:112548479..112548496,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=74349|HGNC=|MCL_coexpression_id=157|UniProt=D6RCH8|association_with_transcript=2bp_to_ENSMUST00000137158_5end|description=CAGE_peak_3_at_Fam160a2_5end|id=chr7:112548479..112548496,-|ontology_enrichment_celltype=CL:0000239!9.07e-07!6;CL:0000677!9.07e-07!6;CL:0000212!9.07e-07!6;CL:0000584!9.07e-07!6|ontology_enrichment_celltype_v019_2=CL:0000239,2.74e-13,6;CL:0000677,2.74e-13,6;CL:0000584,2.74e-13,6;CL:0000075,2.02e-11,7;CL:0000066,5.62e-09,25;CL:0002563,6.35e-09,9;CL:0002251,6.35e-09,9;CL:0000682,1.13e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.42e-07,3;DOID:4045,1.42e-07,3|ontology_enrichment_uberon=UBERON:0000344!3.03e-10!15;UBERON:0001242!8.18e-09!13;UBERON:0000060!8.18e-09!13;UBERON:0001262!8.18e-09!13;UBERON:0004786!8.18e-09!13;UBERON:0004923!3.26e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.08e-11,2;UBERON:0000076,1.08e-11,2;UBERON:0005333,1.08e-11,2;UBERON:0008425,1.08e-11,2;UBERON:0005311,1.08e-11,2;UBERON:0003350,6.35e-09,9;UBERON:0004808,6.35e-09,9;UBERON:0001277,6.35e-09,9;UBERON:0000485,2.51e-07,11|phase1_expression=0,1.74487703819681,1.36499771816861,2.41971369045464,1.00179145989269,0.839396359559449,0.934450562382103,0.129123323441576,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.425216450755349,0,0,0.799962113967033,0.45881856213434,2.8711598205751,0.86152399231815,1.50829862880122,0.190023419456374,0.252030129759931,0.665191531965914,0,0,0,0.577703239502549,0,0.204169356262369,1.25559489221072,0,3.14114246384279,1.17646297606203,1.36609096991689,3.88408282424923,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0.405017814995072,0,0,0,0,0.0958454710182364,0.919218786610021,0,0.255374676170375,0,0,0.0914876436024097,0,0,0,0,0,0.284743361598206,0.186399445825301,0.075726193333184,0.151143120213571,0,0,1.3599426674155,0,0,0,0,0.170430322578058,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,0.22836775943812,0,0,0.346970653532272,0,0,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0.292780797011547,0,0.255457055208591,0,0,0.127070227073065,0.149790639404823,0.915001205637253,0,0,0.255715457330331,0,0,0,0.373220911830279,0,0,0,0,0,0,0.136072998302656,0,0,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0.414251545071004,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0,0.210289948564127,0,0.660837565967596,0,0,0,0,0,0.22237804384487,0,0.474529061544512,0,0,0,0.19496408711912,0,0.864552199498777,0.597423819763102,0.189667900953082,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0.296452627087149,0,0,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0.324270453550071,0,0,0,0,0,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.6540994667995,28.6974216156922,0,0.117211686592203,0,0,0,0,0.215423397732799,0.238968797952552,0,0.566153061577665,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0.23467170806371,0.42366414172764,0,0,0,0.120625849856312,0,0.328281799490123,0,0,0,0,0.185194527369712,0,0,0,0,0,0.138199973804424,0,0,0,0.108005340821801,0,0,0,0,0,2.07383957266869,0,1.69107881605257,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.314578033277133,0.241584120826006,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0,0,0.116876902181569,0,0.221985953374065,0,0.335769232728157,0,0,0.183151624267265,0,0,1.12950368523413,0.920650473014354,0,0.515559547031063,0,0.755393897389701,0,0.45032120322422,0,0,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0,0,0.114870937911227,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,1.12228454331548,0,0.197008964751127,0,0,0.192906610981141,0,0,0,0,0,0.231867835620421|short_description=p3@Fam160a2}} | ||
|EntrezGene=74349 | |||
|HGNC= | |||
|MCL_coexpression_id=157 | |||
|UniProt=D6RCH8 | |||
|association_with_transcript=2bp_to_ENSMUST00000137158_5end | |||
|description=CAGE_peak_3_at_Fam160a2_5end | |||
|id=chr7:112548479..112548496,- | |||
|ontology_enrichment_celltype=CL:0000239!9.07e-07!6;CL:0000677!9.07e-07!6;CL:0000212!9.07e-07!6;CL:0000584!9.07e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.74e-13,6;CL:0000677,2.74e-13,6;CL:0000584,2.74e-13,6;CL:0000075,2.02e-11,7;CL:0000066,5.62e-09,25;CL:0002563,6.35e-09,9;CL:0002251,6.35e-09,9;CL:0000682,1.13e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.42e-07,3;DOID:4045,1.42e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000344!3.03e-10!15;UBERON:0001242!8.18e-09!13;UBERON:0000060!8.18e-09!13;UBERON:0001262!8.18e-09!13;UBERON:0004786!8.18e-09!13;UBERON:0004923!3.26e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.08e-11,2;UBERON:0000076,1.08e-11,2;UBERON:0005333,1.08e-11,2;UBERON:0008425,1.08e-11,2;UBERON:0005311,1.08e-11,2;UBERON:0003350,6.35e-09,9;UBERON:0004808,6.35e-09,9;UBERON:0001277,6.35e-09,9;UBERON:0000485,2.51e-07,11 | |||
|phase1_expression=0,1.74487703819681,1.36499771816861,2.41971369045464,1.00179145989269,0.839396359559449,0.934450562382103,0.129123323441576,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.425216450755349,0,0,0.799962113967033,0.45881856213434,2.8711598205751,0.86152399231815,1.50829862880122,0.190023419456374,0.252030129759931,0.665191531965914,0,0,0,0.577703239502549,0,0.204169356262369,1.25559489221072,0,3.14114246384279,1.17646297606203,1.36609096991689,3.88408282424923,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0.405017814995072,0,0,0,0,0.0958454710182364,0.919218786610021,0,0.255374676170375,0,0,0.0914876436024097,0,0,0,0,0,0.284743361598206,0.186399445825301,0.075726193333184,0.151143120213571,0,0,1.3599426674155,0,0,0,0,0.170430322578058,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,0.22836775943812,0,0,0.346970653532272,0,0,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0.292780797011547,0,0.255457055208591,0,0,0.127070227073065,0.149790639404823,0.915001205637253,0,0,0.255715457330331,0,0,0,0.373220911830279,0,0,0,0,0,0,0.136072998302656,0,0,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0.414251545071004,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0,0.210289948564127,0,0.660837565967596,0,0,0,0,0,0.22237804384487,0,0.474529061544512,0,0,0,0.19496408711912,0,0.864552199498777,0.597423819763102,0.189667900953082,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0.296452627087149,0,0,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0.324270453550071,0,0,0,0,0,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.6540994667995,28.6974216156922,0,0.117211686592203,0,0,0,0,0.215423397732799,0.238968797952552,0,0.566153061577665,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0.23467170806371,0.42366414172764,0,0,0,0.120625849856312,0,0.328281799490123,0,0,0,0,0.185194527369712,0,0,0,0,0,0.138199973804424,0,0,0,0.108005340821801,0,0,0,0,0,2.07383957266869,0,1.69107881605257,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.314578033277133,0.241584120826006,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0,0,0.116876902181569,0,0.221985953374065,0,0.335769232728157,0,0,0.183151624267265,0,0,1.12950368523413,0.920650473014354,0,0.515559547031063,0,0.755393897389701,0,0.45032120322422,0,0,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0,0,0.114870937911227,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,1.12228454331548,0,0.197008964751127,0,0,0.192906610981141,0,0,0,0,0,0.231867835620421 | |||
|short_description=p3@Fam160a2 | |||
}} |
Revision as of 11:23, 14 September 2013
Short description: | p3@Fam160a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fam160a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:157 |
Association with transcript: | 2bp_to_ENSMUST00000137158_5end |
EntrezGene: | Fam160a2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.74e-13 | 6 |
gut absorptive cell | 2.74e-13 | 6 |
enterocyte | 2.74e-13 | 6 |
columnar/cuboidal epithelial cell | 2.02e-11 | 7 |
epithelial cell | 5.62e-09 | 25 |
intestinal epithelial cell | 6.35e-09 | 9 |
epithelial cell of alimentary canal | 6.35e-09 | 9 |
M cell of gut | 1.13e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 1.08e-11 | 2 |
external ectoderm | 1.08e-11 | 2 |
mammary bud | 1.08e-11 | 2 |
mammary ridge | 1.08e-11 | 2 |
mammary placode | 1.08e-11 | 2 |
epithelium of mucosa | 6.35e-09 | 9 |
gastrointestinal system epithelium | 6.35e-09 | 9 |
intestinal epithelium | 6.35e-09 | 9 |
simple columnar epithelium | 2.51e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.42e-07 | 3 |
muscle cancer | 1.42e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.