FFCP PHASE1:Mm9::chr1:87857604..87857648,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=227326|HGNC=|MCL_coexpression_id=1611|UniProt=E9QQ79,Q14BV9|association_with_transcript=0bp_to_ENSMUST00000086975,NM_001033290,uc007buq.1_5end|description=CAGE_peak_1_at_Gpr55_5end|id=chr1:87857604..87857648,-|ontology_enrichment_celltype=CL:0002563!7.80e-08!9;CL:0002251!7.80e-08!9|ontology_enrichment_celltype_v019_2=CL:0002563,1.04e-13,9;CL:0002251,1.04e-13,9;CL:0000239,1.46e-09,6;CL:0000677,1.46e-09,6;CL:0000584,1.46e-09,6;CL:0000553,1.40e-08,6;CL:0000556,1.40e-08,6;CL:0000075,4.75e-08,7;CL:0002076,2.28e-07,15;CL:0000066,3.53e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!4.70e-14!59;UBERON:0004923!2.04e-13!24;UBERON:0004119!2.64e-13!130;UBERON:0000925!2.64e-13!130;UBERON:0006595!2.64e-13!130;UBERON:0001007!3.93e-13!128;UBERON:0001555!3.93e-13!128;UBERON:0007026!3.93e-13!128;UBERON:0000344!1.92e-12!15;UBERON:0004921!6.02e-12!126;UBERON:0004185!6.02e-12!126;UBERON:0000160!1.21e-11!43;UBERON:0001242!9.90e-11!13;UBERON:0000060!9.90e-11!13;UBERON:0001262!9.90e-11!13;UBERON:0004786!9.90e-11!13;UBERON:0003350!7.80e-08!9;UBERON:0004808!7.80e-08!9;UBERON:0001277!7.80e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.22e-22,15;UBERON:0000160,5.09e-22,31;UBERON:0004923,6.10e-21,24;UBERON:0001242,2.59e-19,13;UBERON:0001262,2.59e-19,13;UBERON:0004786,2.59e-19,13;UBERON:0005409,9.86e-18,47;UBERON:0003350,1.04e-13,9;UBERON:0004808,1.04e-13,9;UBERON:0001277,1.04e-13,9;UBERON:0000485,8.11e-11,11;UBERON:0004119,6.19e-09,118;UBERON:0000925,6.19e-09,118;UBERON:0006595,6.19e-09,118;UBERON:0001007,1.64e-08,116;UBERON:0001555,1.64e-08,116;UBERON:0007026,1.64e-08,116;UBERON:0004921,3.53e-07,114;UBERON:0002108,7.22e-07,4|phase1_expression=0,19.8915982354436,28.6649520815408,1.20985684522732,2.00358291978539,22.3279431642813,24.9965525437212,1.93684985162364,0,0,0,0,0,0.262261207256992,2.99798785634096,1.61980213911861,2.09868563438444,5.36285681109004,3.83920414096069,3.81950686618227,0.17008658030214,4.56738375524072,2.87319768052829,42.078007194666,35.7878478464785,27.563134277521,31.0148637234534,35.7682246258576,4.75058548640935,5.79669298447841,15.299405235216,0,0,0,7.22129049378186,6.81562045969819,7.55426618170766,0,0,1.0470474879476,2.35292595212406,2.04913645487534,1.45653105909346,0,0,0,0,0,0,0,0,0,7.04686945442493,1.45072428402269,3.6970317905671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,1.37020655662872,4.91981978929626,0.29688427812965,0,0,0,0,0.117588707135705,0,76.1360500621872,0.289198713839823,0.884610551949874,0.647067399789637,0,0.484875253135222,0,0,0,16.3492515333498,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0.12811372028485,0.187403449119458,0,0,0.567318240503458,0,0,0,1.0447564995665,0.411564272815887,0,0,0,0,0.207125772535502,0,0,0.710234206755631,0,0,0,0,0,0,0,0,0,0.439100230582101,0,0,0,16.5209391491899,2.90895623329899,0,0,0.128867461322093,0.403367049246685,0.667134131534611,1.33157938278791,8.0669940462567,0.988193728344065,1.50801125280162,0.994782360205754,1.9496408711912,17.0775687644302,7.99710784536369,3.78368419183298,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0.923765950833023,0,0,0,0.234690248288502,0,0.238043640886014,0.975668239288994,0.157635144106191,0,0.318909537314974,0.655453258862952,1.03610989119537,0.723245292907558,0,0,0.983528546038072,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0.329940245945071,1.32745138339963,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,1.03135543248187,0,0,0,0,0,0,0,0,0,2.54198485036584,0.220528398054962,0.32977250588296,0,0.120625849856312,0,0,4.08073171281791,0,5.98048082792484,0,0.555583582109135,0.188368457004691,0.956859594047176,2.0590035588587,0,0.139951452323658,0.276399947608848,2.86401185404534,0,0,0.216010681643603,0.627264888043406,1.09181281873089,0.539457385539283,0.0826534557253359,0.26175594198403,0.259229946583586,1.86401793926078,0,0,0,0,0,0.168956125490778,0,0,0,0,0,1.26404448251271,0.608175645870493,1.02710957164827,1.42912905275575,1.9692936523423,0.79472541912506,0.240390899039938,0.147689527174577,0.403865799792591,0.228620419965,0.504130925684203,1.16949456887703,0.769694733122636,1.05189211963412,0,0,0,0,0.772758376128762,0,0.36630324853453,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0.320919209591815,0,0.50695859978048,0.188626341386076,0,0.0640251524048693,0.17230640686684,0,0.463537303779422,0,0,0.294397840268795,0.685738504770831,0,0.715308569841963,0.290692833264657,0.188218760830661,0.25384382367503,0.182927972872773,0,0,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0.701794825336225,0.214871054048298,0.382576664137687,0,0|short_description=p1@Gpr55}} | ||
|EntrezGene=227326 | |||
|HGNC= | |||
|MCL_coexpression_id=1611 | |||
|UniProt=E9QQ79,Q14BV9 | |||
|association_with_transcript=0bp_to_ENSMUST00000086975,NM_001033290,uc007buq.1_5end | |||
|description=CAGE_peak_1_at_Gpr55_5end | |||
|id=chr1:87857604..87857648,- | |||
|ontology_enrichment_celltype=CL:0002563!7.80e-08!9;CL:0002251!7.80e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.04e-13,9;CL:0002251,1.04e-13,9;CL:0000239,1.46e-09,6;CL:0000677,1.46e-09,6;CL:0000584,1.46e-09,6;CL:0000553,1.40e-08,6;CL:0000556,1.40e-08,6;CL:0000075,4.75e-08,7;CL:0002076,2.28e-07,15;CL:0000066,3.53e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.70e-14!59;UBERON:0004923!2.04e-13!24;UBERON:0004119!2.64e-13!130;UBERON:0000925!2.64e-13!130;UBERON:0006595!2.64e-13!130;UBERON:0001007!3.93e-13!128;UBERON:0001555!3.93e-13!128;UBERON:0007026!3.93e-13!128;UBERON:0000344!1.92e-12!15;UBERON:0004921!6.02e-12!126;UBERON:0004185!6.02e-12!126;UBERON:0000160!1.21e-11!43;UBERON:0001242!9.90e-11!13;UBERON:0000060!9.90e-11!13;UBERON:0001262!9.90e-11!13;UBERON:0004786!9.90e-11!13;UBERON:0003350!7.80e-08!9;UBERON:0004808!7.80e-08!9;UBERON:0001277!7.80e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.22e-22,15;UBERON:0000160,5.09e-22,31;UBERON:0004923,6.10e-21,24;UBERON:0001242,2.59e-19,13;UBERON:0001262,2.59e-19,13;UBERON:0004786,2.59e-19,13;UBERON:0005409,9.86e-18,47;UBERON:0003350,1.04e-13,9;UBERON:0004808,1.04e-13,9;UBERON:0001277,1.04e-13,9;UBERON:0000485,8.11e-11,11;UBERON:0004119,6.19e-09,118;UBERON:0000925,6.19e-09,118;UBERON:0006595,6.19e-09,118;UBERON:0001007,1.64e-08,116;UBERON:0001555,1.64e-08,116;UBERON:0007026,1.64e-08,116;UBERON:0004921,3.53e-07,114;UBERON:0002108,7.22e-07,4 | |||
|phase1_expression=0,19.8915982354436,28.6649520815408,1.20985684522732,2.00358291978539,22.3279431642813,24.9965525437212,1.93684985162364,0,0,0,0,0,0.262261207256992,2.99798785634096,1.61980213911861,2.09868563438444,5.36285681109004,3.83920414096069,3.81950686618227,0.17008658030214,4.56738375524072,2.87319768052829,42.078007194666,35.7878478464785,27.563134277521,31.0148637234534,35.7682246258576,4.75058548640935,5.79669298447841,15.299405235216,0,0,0,7.22129049378186,6.81562045969819,7.55426618170766,0,0,1.0470474879476,2.35292595212406,2.04913645487534,1.45653105909346,0,0,0,0,0,0,0,0,0,7.04686945442493,1.45072428402269,3.6970317905671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,1.37020655662872,4.91981978929626,0.29688427812965,0,0,0,0,0.117588707135705,0,76.1360500621872,0.289198713839823,0.884610551949874,0.647067399789637,0,0.484875253135222,0,0,0,16.3492515333498,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0.12811372028485,0.187403449119458,0,0,0.567318240503458,0,0,0,1.0447564995665,0.411564272815887,0,0,0,0,0.207125772535502,0,0,0.710234206755631,0,0,0,0,0,0,0,0,0,0.439100230582101,0,0,0,16.5209391491899,2.90895623329899,0,0,0.128867461322093,0.403367049246685,0.667134131534611,1.33157938278791,8.0669940462567,0.988193728344065,1.50801125280162,0.994782360205754,1.9496408711912,17.0775687644302,7.99710784536369,3.78368419183298,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0.923765950833023,0,0,0,0.234690248288502,0,0.238043640886014,0.975668239288994,0.157635144106191,0,0.318909537314974,0.655453258862952,1.03610989119537,0.723245292907558,0,0,0.983528546038072,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0.329940245945071,1.32745138339963,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,1.03135543248187,0,0,0,0,0,0,0,0,0,2.54198485036584,0.220528398054962,0.32977250588296,0,0.120625849856312,0,0,4.08073171281791,0,5.98048082792484,0,0.555583582109135,0.188368457004691,0.956859594047176,2.0590035588587,0,0.139951452323658,0.276399947608848,2.86401185404534,0,0,0.216010681643603,0.627264888043406,1.09181281873089,0.539457385539283,0.0826534557253359,0.26175594198403,0.259229946583586,1.86401793926078,0,0,0,0,0,0.168956125490778,0,0,0,0,0,1.26404448251271,0.608175645870493,1.02710957164827,1.42912905275575,1.9692936523423,0.79472541912506,0.240390899039938,0.147689527174577,0.403865799792591,0.228620419965,0.504130925684203,1.16949456887703,0.769694733122636,1.05189211963412,0,0,0,0,0.772758376128762,0,0.36630324853453,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0.320919209591815,0,0.50695859978048,0.188626341386076,0,0.0640251524048693,0.17230640686684,0,0.463537303779422,0,0,0.294397840268795,0.685738504770831,0,0.715308569841963,0.290692833264657,0.188218760830661,0.25384382367503,0.182927972872773,0,0,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0.701794825336225,0.214871054048298,0.382576664137687,0,0 | |||
|short_description=p1@Gpr55 | |||
}} |
Revision as of 21:07, 13 September 2013
Short description: | p1@Gpr55 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gpr55_5end |
Coexpression cluster: | MCL_coexpression_mm9:1611 |
Association with transcript: | 0bp_to_ENSMUST00000086975, NM_001033290, uc007buq.1_5end |
EntrezGene: | Gpr55 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.04e-13 | 9 |
epithelial cell of alimentary canal | 1.04e-13 | 9 |
brush border epithelial cell | 1.46e-09 | 6 |
gut absorptive cell | 1.46e-09 | 6 |
enterocyte | 1.46e-09 | 6 |
megakaryocyte progenitor cell | 1.40e-08 | 6 |
megakaryocyte | 1.40e-08 | 6 |
columnar/cuboidal epithelial cell | 4.75e-08 | 7 |
endo-epithelial cell | 2.28e-07 | 15 |
epithelial cell | 3.53e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.22e-22 | 15 |
intestine | 5.09e-22 | 31 |
organ component layer | 6.10e-21 | 24 |
intestinal mucosa | 2.59e-19 | 13 |
wall of intestine | 2.59e-19 | 13 |
gastrointestinal system mucosa | 2.59e-19 | 13 |
gastrointestinal system | 9.86e-18 | 47 |
epithelium of mucosa | 1.04e-13 | 9 |
gastrointestinal system epithelium | 1.04e-13 | 9 |
intestinal epithelium | 1.04e-13 | 9 |
simple columnar epithelium | 8.11e-11 | 11 |
endoderm-derived structure | 6.19e-09 | 118 |
endoderm | 6.19e-09 | 118 |
presumptive endoderm | 6.19e-09 | 118 |
digestive system | 1.64e-08 | 116 |
digestive tract | 1.64e-08 | 116 |
primitive gut | 1.64e-08 | 116 |
subdivision of digestive tract | 3.53e-07 | 114 |
small intestine | 7.22e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.