Personal tools

FFCP PHASE1:Mm9::chr4:100151411..100151477,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=381534|HGNC=|MCL_coexpression_id=0|UniProt=Q3V081,B1AUC4,B7ZWG1|association_with_transcript=0bp_to_ENSMUST00000092730,ENSMUST00000106979,ENSMUST00000133493,NM_001033773,uc008tve.1,uc012dhj.1_5end|description=CAGE_peak_1_at_Ube2u_5end|id=chr4:100151411..100151477,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,1.76e-08,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!4.45e-09!22;UBERON:0007499!4.45e-09!22;UBERON:0006925!4.45e-09!22;UBERON:0009497!4.45e-09!22;UBERON:0000015!4.45e-09!22;UBERON:0002423!4.45e-09!22;UBERON:0006235!4.45e-09!22;UBERON:0008835!4.45e-09!22;UBERON:0003894!4.45e-09!22;UBERON:0004161!4.45e-09!22;UBERON:0008836!4.45e-09!22;UBERON:0005172!2.24e-08!49;UBERON:0005173!2.24e-08!49;UBERON:0002417!2.24e-08!49;UBERON:0000916!2.24e-08!49;UBERON:0009854!2.57e-08!23;UBERON:0009856!2.57e-08!23;UBERON:0009569!7.06e-08!66;UBERON:0000466!4.50e-07!79;UBERON:0002365!5.27e-07!25;UBERON:0002330!5.27e-07!25|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.41e-14,22;UBERON:0007499,6.41e-14,22;UBERON:0006925,6.41e-14,22;UBERON:0009497,6.41e-14,22;UBERON:0000015,6.41e-14,22;UBERON:0002423,6.41e-14,22;UBERON:0006235,6.41e-14,22;UBERON:0008835,6.41e-14,22;UBERON:0003894,6.41e-14,22;UBERON:0004161,6.41e-14,22;UBERON:0008836,6.41e-14,22;UBERON:0009854,3.35e-13,23;UBERON:0009856,3.35e-13,23;UBERON:0002365,6.12e-12,25;UBERON:0002330,6.12e-12,25;UBERON:0001894,5.43e-11,10;UBERON:0006222,5.43e-11,10;UBERON:0000007,1.41e-10,8;UBERON:0003296,1.41e-10,8;UBERON:0010133,1.41e-10,8;UBERON:0002368,2.37e-09,60;UBERON:0002530,2.52e-08,65;UBERON:0000949,3.91e-07,72;UBERON:0003104,6.61e-07,61;UBERON:0009142,6.61e-07,61;UBERON:0005172,7.20e-07,49;UBERON:0005173,7.20e-07,49;UBERON:0002417,7.20e-07,49;UBERON:0000916,7.20e-07,49|phase1_expression=4.64431656603902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,87.8497187260551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,1.09843091367236,0.58328969722285,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.299600110518405,1.53687322128622,0.103689612308478,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0,0,1.10115880999389,0.638436690425939,0.153606533256243,0,0.823388792421687,0,0,0.56276261003168,0,0,0,0.186399445825301,0,0,0.579728977403356,3.44169550792555,1.3599426674155,3.77792234146472,5.84798775702902,4.03224198387602,9.69066498909088,0,0,0,3.66192891419369,0,0,0,0,0,0,11.9893073705013,0,0,0.346970653532272,0,0.230615497256059,0.301445281105245,0.470354828542819,0,0.247194967734374,0,0,0,0,0,0,0.585561594023094,0,0,0,0,0,0.149790639404823,0.457500602818626,0,0,0,1.0389402227978,0.324482526135515,0.203678727700633,0.373220911830279,0.252722758433675,0.210441855886474,0.520481771850815,0.689706313300419,0.360124259610698,0.60281927134286,0.340182495756639,0.2562274405697,0.374806898238915,0,0.646703978798527,0.189106080167819,0.175951124163949,0,0,0,0,0.59710280045548,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.473489471170421,0,0.462801338662135,0.697601834251224,0.268273401399619,0.116765342367169,0,0,0.0810688095458557,0,0,0.134206418760372,1.26173969138476,0.92614151141356,0,0,0.426576501070468,0,0,0,0,0.190225626112559,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.379335801906163,0.342745537829186,0,1.62921062276251,0.969762435838129,0.631222379012867,0.379419222745544,0.442830443938806,1.09899109488962,0.987177311374404,1.1858105083486,0.333690211432188,0,0.449724224769707,0.608580364165509,0,0.50925170356284,2.01387296215567,2.10775794807546,0.549122826376163,1.43768206527355,0,0.936113019343682,1.01031551178845,4.84373016509163,9.16642690590398,0.739012760666419,0.189491411770485,0.325929952884052,0,0.938760993154008,0.335012514883631,0.714130922658041,0,0.315270288212382,0,0.318909537314974,0,0.518054945597687,0.144649058581512,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0.292255857911312,0.395287777946524,0,2.55492153374884,0.35613120733451,0.325773918707152,1.48473110675282,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0,0,0,1.02131881726136,1.8006109403131,0.388076051348264,2.35770738534752,5.67488747655275,2.31879462882692,1.64549020602121,0,0.23467170806371,0,0,0,0,0,0,0,0,0.18542530201051,0,0.206386867963223,0,0.188368457004691,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0,0,0,0,389.511820630776,0.299033092087958,0.330916980914195,0.388902376688095,0.645799117388655,0.506868376472335,0.704143431874524,0,0.419437377702843,129.489088762739,250.586105444343,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0.194915761479505,0,0,0.226730383615211,0,0,0.167884616364078,0.19318959403219,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.682934423016537,0.243106717068294,0.419226325255965,0.367687016900028,0.222246727801615,0.618105171716683,0,1.01078884705519,0,0.943131706930381,0.655490552289177,0.448176066834085,0.459483751644906,0,0.231768651889711,0,0.412085900803307,0.147198920134397,0.685738504770831,0.532427418478012,0.238436189947321,0.581385666529314,0.376437521661322,0.25384382367503,0.365855945745545,0.789209134313529,1.08643291076689,0,0.474540072496697,0.29551344712669,0.818462086339379,0.309873682371932,0,0.749431733813838,0.935726433781634,0.214871054048298,0.191288332068843,0,0|short_description=p1@Ube2u}}
|EntrezGene=381534
|HGNC=
|MCL_coexpression_id=0
|UniProt=Q3V081,B1AUC4,B7ZWG1
|association_with_transcript=0bp_to_ENSMUST00000092730,ENSMUST00000106979,ENSMUST00000133493,NM_001033773,uc008tve.1,uc012dhj.1_5end
|description=CAGE_peak_1_at_Ube2u_5end
|id=chr4:100151411..100151477,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,1.76e-08,5
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!4.45e-09!22;UBERON:0007499!4.45e-09!22;UBERON:0006925!4.45e-09!22;UBERON:0009497!4.45e-09!22;UBERON:0000015!4.45e-09!22;UBERON:0002423!4.45e-09!22;UBERON:0006235!4.45e-09!22;UBERON:0008835!4.45e-09!22;UBERON:0003894!4.45e-09!22;UBERON:0004161!4.45e-09!22;UBERON:0008836!4.45e-09!22;UBERON:0005172!2.24e-08!49;UBERON:0005173!2.24e-08!49;UBERON:0002417!2.24e-08!49;UBERON:0000916!2.24e-08!49;UBERON:0009854!2.57e-08!23;UBERON:0009856!2.57e-08!23;UBERON:0009569!7.06e-08!66;UBERON:0000466!4.50e-07!79;UBERON:0002365!5.27e-07!25;UBERON:0002330!5.27e-07!25
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.41e-14,22;UBERON:0007499,6.41e-14,22;UBERON:0006925,6.41e-14,22;UBERON:0009497,6.41e-14,22;UBERON:0000015,6.41e-14,22;UBERON:0002423,6.41e-14,22;UBERON:0006235,6.41e-14,22;UBERON:0008835,6.41e-14,22;UBERON:0003894,6.41e-14,22;UBERON:0004161,6.41e-14,22;UBERON:0008836,6.41e-14,22;UBERON:0009854,3.35e-13,23;UBERON:0009856,3.35e-13,23;UBERON:0002365,6.12e-12,25;UBERON:0002330,6.12e-12,25;UBERON:0001894,5.43e-11,10;UBERON:0006222,5.43e-11,10;UBERON:0000007,1.41e-10,8;UBERON:0003296,1.41e-10,8;UBERON:0010133,1.41e-10,8;UBERON:0002368,2.37e-09,60;UBERON:0002530,2.52e-08,65;UBERON:0000949,3.91e-07,72;UBERON:0003104,6.61e-07,61;UBERON:0009142,6.61e-07,61;UBERON:0005172,7.20e-07,49;UBERON:0005173,7.20e-07,49;UBERON:0002417,7.20e-07,49;UBERON:0000916,7.20e-07,49
|phase1_expression=4.64431656603902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,87.8497187260551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,1.09843091367236,0.58328969722285,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.299600110518405,1.53687322128622,0.103689612308478,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0,0,1.10115880999389,0.638436690425939,0.153606533256243,0,0.823388792421687,0,0,0.56276261003168,0,0,0,0.186399445825301,0,0,0.579728977403356,3.44169550792555,1.3599426674155,3.77792234146472,5.84798775702902,4.03224198387602,9.69066498909088,0,0,0,3.66192891419369,0,0,0,0,0,0,11.9893073705013,0,0,0.346970653532272,0,0.230615497256059,0.301445281105245,0.470354828542819,0,0.247194967734374,0,0,0,0,0,0,0.585561594023094,0,0,0,0,0,0.149790639404823,0.457500602818626,0,0,0,1.0389402227978,0.324482526135515,0.203678727700633,0.373220911830279,0.252722758433675,0.210441855886474,0.520481771850815,0.689706313300419,0.360124259610698,0.60281927134286,0.340182495756639,0.2562274405697,0.374806898238915,0,0.646703978798527,0.189106080167819,0.175951124163949,0,0,0,0,0.59710280045548,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.473489471170421,0,0.462801338662135,0.697601834251224,0.268273401399619,0.116765342367169,0,0,0.0810688095458557,0,0,0.134206418760372,1.26173969138476,0.92614151141356,0,0,0.426576501070468,0,0,0,0,0.190225626112559,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.379335801906163,0.342745537829186,0,1.62921062276251,0.969762435838129,0.631222379012867,0.379419222745544,0.442830443938806,1.09899109488962,0.987177311374404,1.1858105083486,0.333690211432188,0,0.449724224769707,0.608580364165509,0,0.50925170356284,2.01387296215567,2.10775794807546,0.549122826376163,1.43768206527355,0,0.936113019343682,1.01031551178845,4.84373016509163,9.16642690590398,0.739012760666419,0.189491411770485,0.325929952884052,0,0.938760993154008,0.335012514883631,0.714130922658041,0,0.315270288212382,0,0.318909537314974,0,0.518054945597687,0.144649058581512,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0.292255857911312,0.395287777946524,0,2.55492153374884,0.35613120733451,0.325773918707152,1.48473110675282,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0,0,0,1.02131881726136,1.8006109403131,0.388076051348264,2.35770738534752,5.67488747655275,2.31879462882692,1.64549020602121,0,0.23467170806371,0,0,0,0,0,0,0,0,0.18542530201051,0,0.206386867963223,0,0.188368457004691,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0,0,0,0,389.511820630776,0.299033092087958,0.330916980914195,0.388902376688095,0.645799117388655,0.506868376472335,0.704143431874524,0,0.419437377702843,129.489088762739,250.586105444343,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0.194915761479505,0,0,0.226730383615211,0,0,0.167884616364078,0.19318959403219,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.682934423016537,0.243106717068294,0.419226325255965,0.367687016900028,0.222246727801615,0.618105171716683,0,1.01078884705519,0,0.943131706930381,0.655490552289177,0.448176066834085,0.459483751644906,0,0.231768651889711,0,0.412085900803307,0.147198920134397,0.685738504770831,0.532427418478012,0.238436189947321,0.581385666529314,0.376437521661322,0.25384382367503,0.365855945745545,0.789209134313529,1.08643291076689,0,0.474540072496697,0.29551344712669,0.818462086339379,0.309873682371932,0,0.749431733813838,0.935726433781634,0.214871054048298,0.191288332068843,0,0
|short_description=p1@Ube2u
}}

Revision as of 03:13, 14 September 2013

Short description:p1@Ube2u
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ube2u_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 0bp_to_ENSMUST00000092730, ENSMUST00000106979, ENSMUST00000133493, NM_001033773, uc008tve.1, uc012dhj.1_5end
EntrezGene:Ube2u
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ube2u

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A387.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.66
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.99
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H14.84
liver, neonate N30.CNhs11106.1382-42D19.17
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I72.55
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B95.67
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G5389.51
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H3129.49
testis, neonate N30.CNhs11130.1391-42E2250.59
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hepatocyte1.76e-085

Uber anatomy
Ontology termp-valuen
liver6.41e-1422
epithelial sac6.41e-1422
digestive gland6.41e-1422
epithelium of foregut-midgut junction6.41e-1422
anatomical boundary6.41e-1422
hepatobiliary system6.41e-1422
foregut-midgut junction6.41e-1422
hepatic diverticulum6.41e-1422
liver primordium6.41e-1422
septum transversum6.41e-1422
liver bud6.41e-1422
digestive tract diverticulum3.35e-1323
sac3.35e-1323
exocrine gland6.12e-1225
exocrine system6.12e-1225
diencephalon5.43e-1110
future diencephalon5.43e-1110
pituitary gland1.41e-108
gland of diencephalon1.41e-108
neuroendocrine gland1.41e-108
endocrine gland2.37e-0960
gland2.52e-0865
endocrine system3.91e-0772
mesenchyme6.61e-0761
entire embryonic mesenchyme6.61e-0761
abdomen element7.20e-0749
abdominal segment element7.20e-0749
abdominal segment of trunk7.20e-0749
abdomen7.20e-0749







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:100151411..100151477,%2B&oldid=3002501"