FFCP PHASE1:Hg19::chr10:100206642..100206717,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3257 | |EntrezGene=3257 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5163 | |HGNC=5163 | ||
|TSSclassifier=S | |||
|UniProt=Q92902,Q658M9,Q8WXE5 | |UniProt=Q92902,Q658M9,Q8WXE5 | ||
|association_with_transcript=0bp_to_ENST00000325103,ENST00000338546,ENST00000361490,ENST00000407891,ENST00000465957,ENST00000467246,NM_000195,NM_182639,uc001kpi.1,uc001kpk.1,uc001kpl.2,uc001kpm.1,uc009xwb.2,uc010qpf.1,uc010qph.1_5end | |association_with_transcript=0bp_to_ENST00000325103,ENST00000338546,ENST00000361490,ENST00000407891,ENST00000465957,ENST00000467246,NM_000195,NM_182639,uc001kpi.1,uc001kpk.1,uc001kpl.2,uc001kpm.1,uc009xwb.2,uc010qpf.1,uc010qph.1_5end |
Revision as of 03:07, 6 July 2013
Short description: | p1@HPS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_HPS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000325103, ENST00000338546, ENST00000361490, ENST00000407891, ENST00000465957, ENST00000467246, NM_000195, NM_182639, uc001kpi.1, uc001kpk.1, uc001kpl.2, uc001kpm.1, uc009xwb.2, uc010qpf.1, uc010qph.1_5end |
EntrezGene: | HPS1 |
HGNC: | 5163 |
UniProt: | Q92902Q658M9Q8WXE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@HPS1 |
---|
0
50
100
150
200
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.22e-26 | 168 |
hematopoietic cell | 4.82e-26 | 177 |
hematopoietic oligopotent progenitor cell | 1.14e-25 | 161 |
hematopoietic multipotent progenitor cell | 1.14e-25 | 161 |
connective tissue cell | 1.96e-25 | 361 |
myeloid cell | 6.76e-25 | 108 |
common myeloid progenitor | 6.76e-25 | 108 |
myeloid lineage restricted progenitor cell | 3.61e-24 | 66 |
mesenchymal cell | 5.07e-24 | 354 |
macrophage dendritic cell progenitor | 5.34e-24 | 61 |
Showing 1 to 10 of 27 entries
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.35e-27 | 108 |
hematopoietic system | 1.16e-26 | 98 |
blood island | 1.16e-26 | 98 |
lateral plate mesoderm | 5.63e-25 | 203 |
immune system | 2.25e-24 | 93 |
bone marrow | 2.19e-23 | 76 |
connective tissue | 4.60e-23 | 371 |
bone element | 1.71e-19 | 82 |
skeletal element | 2.07e-18 | 90 |
mesoderm | 7.44e-17 | 315 |
Showing 1 to 10 of 14 entries
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.