FFCP PHASE1:Hg19::chr1:6420713..6420725,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11332|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24157|TSSclassifier=S|UniProt=O00154|association_with_transcript=38bp_to_NM_181865,uc001amr.2_5end|coexpression_cluster_id=C235|description=CAGE_peak_16_at_ACOT7_5end|id=chr1:6420713..6420725,-|ontology_enrichment_celltype=CL:0002563!4.65e-10!4;CL:0000181!3.38e-07!12;CL:0000417!3.38e-07!12;CL:0000668!3.38e-07!12;CL:0000414!3.38e-07!12;CL:0000412!3.38e-07!12;CL:0000182!3.38e-07!12|ontology_enrichment_celltype_v019=CL:0002563;3.35e-66;4!CL:0002253;7.05e-34;2!CL:0002231;3.27e-23;3!CL:0002076;8.73e-16;42!CL:0002251;2.58e-14;20|ontology_enrichment_celltype_v019_2=CL:0002563,3.35e-66,4;CL:0002253,7.05e-34,2;CL:0002231,3.27e-23,3;CL:0002076,3.52e-15,42;CL:0002251,2.58e-14,20;CL:0000223,2.67e-11,58|ontology_enrichment_development_v019=CL:0000223;2.48e-07;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001154!3.71e-10!1;UBERON:0001153!3.71e-10!1;UBERON:0001242!4.65e-10!4;UBERON:0001262!4.65e-10!4;UBERON:0004786!4.65e-10!4;UBERON:0004808!4.65e-10!4;UBERON:0001277!4.65e-10!4;UBERON:0001301!5.79e-10!1;UBERON:0002363!9.82e-10!1;UBERON:0007647!9.82e-10!1;UBERON:0010115!9.82e-10!1;UBERON:0003929!1.94e-09!54;UBERON:0001155!2.42e-09!9;UBERON:0005409!2.50e-08!35;UBERON:0005057!3.16e-08!26;UBERON:0003350!3.24e-08!5;UBERON:0004907!4.45e-08!5;UBERON:0001872!8.91e-08!5;UBERON:0000160!9.56e-08!27;UBERON:0000059!9.91e-08!11;UBERON:0004921!1.09e-07!129;UBERON:0004185!1.09e-07!129;UBERON:0001046!1.13e-07!19;UBERON:0005172!4.42e-07!55;UBERON:0005173!4.42e-07!55|ontology_enrichment_uberon_v019=UBERON:0001242;3.35e-66;4!UBERON:0001262;3.35e-66;4!UBERON:0004786;3.35e-66;4!UBERON:0004808;3.35e-66;4!UBERON:0001277;3.35e-66;4!UBERON:0000485;1.80e-38;7!UBERON:0003929;1.80e-38;7!UBERON:0003350;7.68e-34;8!UBERON:0001052;1.03e-17;4!UBERON:0000160;9.05e-16;17!UBERON:0004907;1.83e-14;5!UBERON:0000344;2.58e-14;20!UBERON:0005409;1.33e-12;22!UBERON:0004921;2.80e-09;33!UBERON:0001155;1.21e-08;9!UBERON:0005911;1.25e-08;36!UBERON:0000490;1.25e-08;33!UBERON:0002367;2.47e-07;11!UBERON:0010147;2.47e-07;11!UBERON:0000059;2.63e-07;11!UBERON:0003937;7.92e-07;12!UBERON:0005399;7.92e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0001242,3.35e-66,4;UBERON:0001262,3.35e-66,4;UBERON:0004786,3.35e-66,4;UBERON:0004808,3.35e-66,4;UBERON:0001277,3.35e-66,4;UBERON:0003350,7.68e-34,8;UBERON:0000485,3.09e-30,9;UBERON:0001052,1.03e-17,4;UBERON:0000160,9.05e-16,17;UBERON:0001046,5.66e-15,19;UBERON:0004907,1.83e-14,5;UBERON:0000344,2.58e-14,20;UBERON:0003929,4.68e-12,54;UBERON:0005409,2.77e-11,25;UBERON:0001155,1.21e-08,9;UBERON:0005911,2.70e-08,82;UBERON:0002367,2.47e-07,11;UBERON:0010147,2.47e-07,11;UBERON:0009846,2.47e-07,11;UBERON:0003353,2.47e-07,11;UBERON:0004902,2.47e-07,11;UBERON:0003820,2.47e-07,11;UBERON:0009847,2.47e-07,11;UBERON:0000059,2.63e-07,11;UBERON:0003937,7.92e-07,12;UBERON:0005399,7.92e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22413289073352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.82273982018842,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.2195351430934,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551482276150566,0.247247575143499,0.674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.788057072991982,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11332 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24157 | |||
|TSSclassifier=S | |||
|UniProt=O00154 | |||
|association_with_transcript=38bp_to_NM_181865,uc001amr.2_5end | |||
|coexpression_cluster_id=C235 | |||
|description=CAGE_peak_16_at_ACOT7_5end | |||
|id=chr1:6420713..6420725,- | |||
|ontology_enrichment_celltype=CL:0002563!4.65e-10!4;CL:0000181!3.38e-07!12;CL:0000417!3.38e-07!12;CL:0000668!3.38e-07!12;CL:0000414!3.38e-07!12;CL:0000412!3.38e-07!12;CL:0000182!3.38e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002563;3.35e-66;4!CL:0002253;7.05e-34;2!CL:0002231;3.27e-23;3!CL:0002076;8.73e-16;42!CL:0002251;2.58e-14;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.35e-66,4;CL:0002253,7.05e-34,2;CL:0002231,3.27e-23,3;CL:0002076,3.52e-15,42;CL:0002251,2.58e-14,20;CL:0000223,2.67e-11,58 | |||
|ontology_enrichment_development_v019=CL:0000223;2.48e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001154!3.71e-10!1;UBERON:0001153!3.71e-10!1;UBERON:0001242!4.65e-10!4;UBERON:0001262!4.65e-10!4;UBERON:0004786!4.65e-10!4;UBERON:0004808!4.65e-10!4;UBERON:0001277!4.65e-10!4;UBERON:0001301!5.79e-10!1;UBERON:0002363!9.82e-10!1;UBERON:0007647!9.82e-10!1;UBERON:0010115!9.82e-10!1;UBERON:0003929!1.94e-09!54;UBERON:0001155!2.42e-09!9;UBERON:0005409!2.50e-08!35;UBERON:0005057!3.16e-08!26;UBERON:0003350!3.24e-08!5;UBERON:0004907!4.45e-08!5;UBERON:0001872!8.91e-08!5;UBERON:0000160!9.56e-08!27;UBERON:0000059!9.91e-08!11;UBERON:0004921!1.09e-07!129;UBERON:0004185!1.09e-07!129;UBERON:0001046!1.13e-07!19;UBERON:0005172!4.42e-07!55;UBERON:0005173!4.42e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;3.35e-66;4!UBERON:0001262;3.35e-66;4!UBERON:0004786;3.35e-66;4!UBERON:0004808;3.35e-66;4!UBERON:0001277;3.35e-66;4!UBERON:0000485;1.80e-38;7!UBERON:0003929;1.80e-38;7!UBERON:0003350;7.68e-34;8!UBERON:0001052;1.03e-17;4!UBERON:0000160;9.05e-16;17!UBERON:0004907;1.83e-14;5!UBERON:0000344;2.58e-14;20!UBERON:0005409;1.33e-12;22!UBERON:0004921;2.80e-09;33!UBERON:0001155;1.21e-08;9!UBERON:0005911;1.25e-08;36!UBERON:0000490;1.25e-08;33!UBERON:0002367;2.47e-07;11!UBERON:0010147;2.47e-07;11!UBERON:0000059;2.63e-07;11!UBERON:0003937;7.92e-07;12!UBERON:0005399;7.92e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,3.35e-66,4;UBERON:0001262,3.35e-66,4;UBERON:0004786,3.35e-66,4;UBERON:0004808,3.35e-66,4;UBERON:0001277,3.35e-66,4;UBERON:0003350,7.68e-34,8;UBERON:0000485,3.09e-30,9;UBERON:0001052,1.03e-17,4;UBERON:0000160,9.05e-16,17;UBERON:0001046,5.66e-15,19;UBERON:0004907,1.83e-14,5;UBERON:0000344,2.58e-14,20;UBERON:0003929,4.68e-12,54;UBERON:0005409,2.77e-11,25;UBERON:0001155,1.21e-08,9;UBERON:0005911,2.70e-08,82;UBERON:0002367,2.47e-07,11;UBERON:0010147,2.47e-07,11;UBERON:0009846,2.47e-07,11;UBERON:0003353,2.47e-07,11;UBERON:0004902,2.47e-07,11;UBERON:0003820,2.47e-07,11;UBERON:0009847,2.47e-07,11;UBERON:0000059,2.63e-07,11;UBERON:0003937,7.92e-07,12;UBERON:0005399,7.92e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22413289073352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.82273982018842,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.2195351430934,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551482276150566,0.247247575143499,0.674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.788057072991982,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p16@ACOT7 | |||
}} |
Revision as of 06:24, 12 September 2013
Short description: | p16@ACOT7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_ACOT7_5end |
Coexpression cluster: | C235_Intestinal_Prostate_liver_colon_small_kidney_pancreas |
Association with transcript: | 38bp_to_NM_181865, uc001amr.2_5end |
EntrezGene: | ACOT7 |
HGNC: | 24157 |
UniProt: | O00154 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.35e-66 | 4 |
epithelial cell of large intestine | 7.05e-34 | 2 |
epithelial cell of prostate | 3.27e-23 | 3 |
endo-epithelial cell | 3.52e-15 | 42 |
epithelial cell of alimentary canal | 2.58e-14 | 20 |
endodermal cell | 2.67e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 3.35e-66 | 4 |
wall of intestine | 3.35e-66 | 4 |
gastrointestinal system mucosa | 3.35e-66 | 4 |
gastrointestinal system epithelium | 3.35e-66 | 4 |
intestinal epithelium | 3.35e-66 | 4 |
epithelium of mucosa | 7.68e-34 | 8 |
simple columnar epithelium | 3.09e-30 | 9 |
rectum | 1.03e-17 | 4 |
intestine | 9.05e-16 | 17 |
hindgut | 5.66e-15 | 19 |
lower digestive tract | 1.83e-14 | 5 |
mucosa | 2.58e-14 | 20 |
gut epithelium | 4.68e-12 | 54 |
gastrointestinal system | 2.77e-11 | 25 |
colon | 1.21e-08 | 9 |
endo-epithelium | 2.70e-08 | 82 |
prostate gland | 2.47e-07 | 11 |
male accessory sex gland | 2.47e-07 | 11 |
embryonic cloacal epithelium | 2.47e-07 | 11 |
epithelium of hindgut | 2.47e-07 | 11 |
urogenital sinus epithelium | 2.47e-07 | 11 |
prostate bud | 2.47e-07 | 11 |
prostate field | 2.47e-07 | 11 |
large intestine | 2.63e-07 | 11 |
sex gland | 7.92e-07 | 12 |
male reproductive gland | 7.92e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.