FFCP PHASE1:Hg19::chr1:119530493..119530572,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6913|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11594|TSSclassifier=S|UniProt=Q96SF7|association_with_transcript=-65bp_to_ENST00000369429_5end|description=CAGE_peak_1_at_TBX15_5end|id=chr1:119530493..119530572,-|ontology_enrichment_celltype=CL:0000055!3.04e-18!180;CL:0002620!3.80e-13!23;CL:0000057!1.21e-10!75;CL:0000188!2.86e-07!9;CL:0000136!4.09e-07!15|ontology_enrichment_celltype_v019=CL:0002620;4.33e-19;23!CL:0000188;5.99e-10;9!CL:0000062;1.53e-09;9!CL:0002570;1.08e-07;8!CL:0000680;1.14e-07;7!CL:0000136;1.49e-07;13!CL:0000327;2.94e-07;15!CL:0000499;4.20e-07;28|ontology_enrichment_celltype_v019_2=CL:0002620,5.95e-19,23;CL:0000057,1.45e-11,76;CL:0000188,5.71e-10,9;CL:0000062,1.67e-09,11;CL:0000375,1.67e-09,11;CL:0000335,1.67e-09,11;CL:0000136,4.44e-09,15;CL:0002570,1.18e-07,8;CL:0000499,3.61e-07,28;CL:0000327,3.88e-07,15|ontology_enrichment_development_v019=CL:0000335;2.03e-09;11|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002199!6.55e-11!45;UBERON:0002416!6.55e-11!45;UBERON:0004290!3.13e-10!70;UBERON:0000914!1.38e-09!83;UBERON:0002329!1.38e-09!83;UBERON:0003077!1.38e-09!83;UBERON:0003059!1.38e-09!83;UBERON:0007282!1.38e-09!83;UBERON:0009618!1.38e-09!83;UBERON:0007285!1.38e-09!83;UBERON:0002097!8.61e-09!40;UBERON:0000486!3.70e-08!82;UBERON:0000475!2.52e-07!365;UBERON:0001013!3.12e-07!14;UBERON:0001134!6.35e-07!61;UBERON:0002036!6.35e-07!61;UBERON:0003082!6.35e-07!61;UBERON:0002385!7.83e-07!63;UBERON:0001015!7.83e-07!63;UBERON:0000383!7.83e-07!63|ontology_enrichment_uberon_v019=UBERON:0001134;1.41e-17;16!UBERON:0002036;1.41e-17;16!UBERON:0002199;4.05e-11;46!UBERON:0002416;4.05e-11;46!UBERON:0002097;4.16e-10;41!UBERON:0001013;6.01e-09;14!UBERON:0003102;7.49e-09;50!UBERON:0002385;2.93e-08;31!UBERON:0001015;2.93e-08;31!UBERON:0000383;2.93e-08;31!UBERON:0002067;5.09e-08;9|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.93e-16,46;UBERON:0002416,1.93e-16,46;UBERON:0002097,2.88e-13,41;UBERON:0001013,6.22e-09,14;UBERON:0002067,4.16e-08,9;UBERON:0004016,4.16e-08,9;UBERON:0010083,4.16e-08,9;UBERON:0002329,5.00e-08,71;UBERON:0003059,5.00e-08,71;UBERON:0007282,5.00e-08,71;UBERON:0004290,5.00e-08,71;UBERON:0009618,5.00e-08,71;UBERON:0003077,8.56e-08,72;UBERON:0007285,8.56e-08,72;UBERON:0007524,1.44e-07,73;UBERON:0002384,2.74e-07,371|phase1_expression=3.81524596468169,2.78330681058278,0,1.0007329835313,0,0.872338524100369,10.1319951267324,1.89515962028049,2.08948502559871,0,0,0,0,0.74259811776028,0.662794751455832,0.672325146451775,0,0.730310090387373,1.46379839637152,0.369363174230364,0.204000691244253,0.313454721478088,0.286235987131057,0,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0,1.15076305659177,1.44575660953827,2.00535164254356,3.0417768981773,1.5905718941022,4.86634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0.35576626268671,0,0,0,3.1728067481262,0,0,0,0,0,0,0,0,0,0,0,4.47274756525787,3.16576279161449,0.264818361626438,1.43418310374407,1.41867352879343,0,0,0,0,0.134710672069688,0.326923806226917,5.75158225050739,6.33793516927999,7.49828581868149,2.80944069147288,1.1409436430889,1.94283284717341,2.58355897016283,3.39933183173076,2.38766371393822,0.204154171254893,0.737005903870608,0.103325781175765,0,0.494533858557114,0,0,0.841680569770331,0.500474079487857,0,0,0.30648779579902,0.751190294532984,0,3.7671823494661,5.33893472046419,3.17897851739343,2.40072876867522,3.91599611106068,8.24449728146013,6.14185625894246,7.59493495085698,3.80004320128675,4.29137416214995,4.05019554026117,2.42469085228218,4.9701342952326,3.12331504505685,3.39121184620975,0,0,0,0,0,0,0.10366105501537,0,0,4.69348596989448,3.85944562915731,2.76269842704961,0.928735856063958,0.721879481669586,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0.196221465125346,1.15424147083917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.977424915930974,0,0,0.231860809950154,0.117408694235822,0,0.925971025153221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46688385559794,4.79556075716608,2.86019314701705,0,7.15312891703765,1.690605505112,0,0,1.54324424557285,0,1.0656887160644,0,0,0,1.62868092146868,0,0,0,0,0,0,0,0,2.39624855491583,3.44585807502342,1.42636905040718,2.60606352001643,3.28762116080613,5.37182889719687,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,2.57652132610194,0,0,2.9115920614313,1.24900292158013,2.83864347061082,2.45996971484698,3.91229929646035,6.82222512167955,9.31257641632544,2.65690239414175,2.02806085395873,2.69339204851057,3.13281851940385,6.86286847621712,0,0,0.106727557803444,0,0,0.30239029332968,3.47350930946288,4.60385919864187,1.96462066103151,0,3.07024349440022,0,0,1.85051632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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6913 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11594 | |||
|TSSclassifier=S | |||
|UniProt=Q96SF7 | |||
|association_with_transcript=-65bp_to_ENST00000369429_5end | |||
|description=CAGE_peak_1_at_TBX15_5end | |||
|id=chr1:119530493..119530572,- | |||
|ontology_enrichment_celltype=CL:0000055!3.04e-18!180;CL:0002620!3.80e-13!23;CL:0000057!1.21e-10!75;CL:0000188!2.86e-07!9;CL:0000136!4.09e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.33e-19;23!CL:0000188;5.99e-10;9!CL:0000062;1.53e-09;9!CL:0002570;1.08e-07;8!CL:0000680;1.14e-07;7!CL:0000136;1.49e-07;13!CL:0000327;2.94e-07;15!CL:0000499;4.20e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,5.95e-19,23;CL:0000057,1.45e-11,76;CL:0000188,5.71e-10,9;CL:0000062,1.67e-09,11;CL:0000375,1.67e-09,11;CL:0000335,1.67e-09,11;CL:0000136,4.44e-09,15;CL:0002570,1.18e-07,8;CL:0000499,3.61e-07,28;CL:0000327,3.88e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000335;2.03e-09;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!6.55e-11!45;UBERON:0002416!6.55e-11!45;UBERON:0004290!3.13e-10!70;UBERON:0000914!1.38e-09!83;UBERON:0002329!1.38e-09!83;UBERON:0003077!1.38e-09!83;UBERON:0003059!1.38e-09!83;UBERON:0007282!1.38e-09!83;UBERON:0009618!1.38e-09!83;UBERON:0007285!1.38e-09!83;UBERON:0002097!8.61e-09!40;UBERON:0000486!3.70e-08!82;UBERON:0000475!2.52e-07!365;UBERON:0001013!3.12e-07!14;UBERON:0001134!6.35e-07!61;UBERON:0002036!6.35e-07!61;UBERON:0003082!6.35e-07!61;UBERON:0002385!7.83e-07!63;UBERON:0001015!7.83e-07!63;UBERON:0000383!7.83e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.41e-17;16!UBERON:0002036;1.41e-17;16!UBERON:0002199;4.05e-11;46!UBERON:0002416;4.05e-11;46!UBERON:0002097;4.16e-10;41!UBERON:0001013;6.01e-09;14!UBERON:0003102;7.49e-09;50!UBERON:0002385;2.93e-08;31!UBERON:0001015;2.93e-08;31!UBERON:0000383;2.93e-08;31!UBERON:0002067;5.09e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.93e-16,46;UBERON:0002416,1.93e-16,46;UBERON:0002097,2.88e-13,41;UBERON:0001013,6.22e-09,14;UBERON:0002067,4.16e-08,9;UBERON:0004016,4.16e-08,9;UBERON:0010083,4.16e-08,9;UBERON:0002329,5.00e-08,71;UBERON:0003059,5.00e-08,71;UBERON:0007282,5.00e-08,71;UBERON:0004290,5.00e-08,71;UBERON:0009618,5.00e-08,71;UBERON:0003077,8.56e-08,72;UBERON:0007285,8.56e-08,72;UBERON:0007524,1.44e-07,73;UBERON:0002384,2.74e-07,371 | |||
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| |||
|short_description=p1@TBX15 | |||
}} |
Revision as of 23:49, 11 September 2013
Short description: | p1@TBX15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TBX15_5end |
Coexpression cluster: | NA |
Association with transcript: | -65bp_to_ENST00000369429_5end |
EntrezGene: | TBX15 |
HGNC: | 11594 |
UniProt: | Q96SF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 5.95e-19 | 23 |
fibroblast | 1.45e-11 | 76 |
cell of skeletal muscle | 5.71e-10 | 9 |
osteoblast | 1.67e-09 | 11 |
osteoprogenitor cell | 1.67e-09 | 11 |
mesenchyme condensation cell | 1.67e-09 | 11 |
fat cell | 4.44e-09 | 15 |
mesenchymal stem cell of adipose | 1.18e-07 | 8 |
stromal cell | 3.61e-07 | 28 |
extracellular matrix secreting cell | 3.88e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
integument | 1.93e-16 | 46 |
integumental system | 1.93e-16 | 46 |
skin of body | 2.88e-13 | 41 |
adipose tissue | 6.22e-09 | 14 |
dermis | 4.16e-08 | 9 |
dermatome | 4.16e-08 | 9 |
future dermis | 4.16e-08 | 9 |
somite | 5.00e-08 | 71 |
presomitic mesoderm | 5.00e-08 | 71 |
presumptive segmental plate | 5.00e-08 | 71 |
dermomyotome | 5.00e-08 | 71 |
trunk paraxial mesoderm | 5.00e-08 | 71 |
paraxial mesoderm | 8.56e-08 | 72 |
presumptive paraxial mesoderm | 8.56e-08 | 72 |
dense mesenchyme tissue | 1.44e-07 | 73 |
connective tissue | 2.74e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.