FFCP PHASE1:Hg19::chr10:11228276..11228288,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2979|description=CAGE_peak_at_chr10:11228276..11228288,+|id=chr10:11228276..11228288,+|ontology_enrichment_celltype=CL:0000037!2.94e-32!172;CL:0000566!2.94e-32!172;CL:0002032!8.64e-29!165;CL:0000837!8.64e-29!165;CL:0000988!9.11e-29!182;CL:0000738!7.49e-28!140;CL:0002087!7.90e-22!119;CL:0002031!1.24e-20!124;CL:0000542!4.12e-17!53;CL:0000051!4.12e-17!53;CL:0000838!8.74e-17!52;CL:0000084!5.24e-13!25;CL:0000827!5.24e-13!25;CL:0000763!1.01e-12!112;CL:0000049!1.01e-12!112;CL:0000791!2.60e-11!18;CL:0000789!2.60e-11!18;CL:0002420!2.60e-11!18;CL:0002419!2.60e-11!18;CL:0000790!2.60e-11!18;CL:0000766!4.85e-09!76;CL:0002393!2.13e-08!9;CL:0002397!2.13e-08!9;CL:0000839!4.96e-07!70|ontology_enrichment_celltype_v019=CL:0002393;8.61e-14;6!CL:0002397;8.61e-14;6!CL:0000623;1.73e-08;3!CL:0000875;2.17e-08;3!CL:0002396;2.17e-08;3!CL:0000226;4.02e-08;3!CL:0000842;4.02e-08;3!CL:0000094;1.32e-07;8!CL:0000542;4.87e-07;53!CL:0000624;6.31e-07;6!CL:0002087;7.75e-07;104|ontology_enrichment_celltype_v019_2=CL:0002393,2.11e-20,9;CL:0002397,2.11e-20,9;CL:0000037,1.21e-19,168;CL:0000738,5.76e-19,136;CL:0000988,5.04e-18,177;CL:0002032,1.37e-17,161;CL:0000837,1.37e-17,161;CL:0002087,1.81e-16,115;CL:0002031,4.13e-13,120;CL:0000838,3.02e-11,52;CL:0000542,6.02e-11,53;CL:0000051,6.02e-11,53;CL:0000623,8.52e-09,3;CL:0000825,8.52e-09,3;CL:0000875,1.92e-08,3;CL:0002396,1.92e-08,3;CL:0000763,5.64e-08,108;CL:0000049,5.64e-08,108;CL:0000226,5.80e-08,3;CL:0000842,5.80e-08,3;CL:0000766,7.95e-08,72;CL:0000094,2.20e-07,8;CL:0000624,3.87e-07,6|ontology_enrichment_development_v019=CL:0000051;4.87e-07;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.00e-22!115;UBERON:0001049!3.91e-15!57;UBERON:0005068!3.91e-15!57;UBERON:0006241!3.91e-15!57;UBERON:0007135!3.91e-15!57;UBERON:0003080!1.03e-13!42;UBERON:0002780!3.16e-13!41;UBERON:0001890!3.16e-13!41;UBERON:0006240!3.16e-13!41;UBERON:0002616!9.80e-12!59;UBERON:0002020!1.28e-11!34;UBERON:0003528!1.28e-11!34;UBERON:0003075!2.42e-11!86;UBERON:0007284!2.42e-11!86;UBERON:0001893!2.67e-11!34;UBERON:0002791!3.41e-11!33;UBERON:0002619!1.07e-10!22;UBERON:0002346!1.42e-10!90;UBERON:0001869!1.84e-10!32;UBERON:0002390!3.04e-10!102;UBERON:0003061!3.04e-10!102;UBERON:0001017!4.08e-10!82;UBERON:0000956!4.43e-10!25;UBERON:0000203!4.43e-10!25;UBERON:0001950!1.31e-09!20;UBERON:0000955!1.61e-09!69;UBERON:0006238!1.61e-09!69;UBERON:0005743!2.34e-09!86;UBERON:0002193!4.25e-09!112;UBERON:0003056!1.50e-08!61;UBERON:0000073!1.76e-07!94;UBERON:0001016!1.76e-07!94;UBERON:0000178!5.46e-07!15;UBERON:0000179!5.46e-07!15;UBERON:0000463!5.46e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;1.18e-14;15!UBERON:0000179;1.18e-14;15!UBERON:0000463;1.18e-14;15|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.03e-15,15;UBERON:0000179,8.03e-15,15;UBERON:0000463,8.03e-15,15;UBERON:0002390,1.47e-08,98;UBERON:0003061,1.47e-08,98;UBERON:0002193,3.07e-07,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.61130724598361,0.0821005894499457,0.314843125254717,1.18009283054671,0,1.08371286321253,0,0.30120591877825,0,0,0,0.293600439334847,1.10799081706375,2.00544447470142,1.73608696572681,0.671746422719773,0.647787332037959,1.28787783817093,0.726991193897824,0.755751887377619,0.242584061187816,0.232429036905685,0,0,0.863077176966451,0,0,0.689491361473237,1.29096936716765,0,0.188242339542605,0,0,0.918251677112708,0,0,0,0.598390972864896,0,0,0,0,0.75374599577023,0.521482918420201,0.217188844705117,0,0,0,1.26753171787165,1.27562579979026,1.46761051855863,1.34794357375794,1.05123824989054,0.32145117339416,3.13514018115373,2.38700012638908,1.46131323011707,3.51992488922645,3.27683166757279,1.77901850772711,1.70692089026603,0.800791974072025,1.14950487990897,0,0,1.1384259382189,0.587237189370939,0.382273228125229,1.32171328579026,0.560508562981536,1.05353633910031,2.75393678159366,5.10913991573914,1.64481199199607,0.167186495390678,0.977766799900771,1.89379122293893,0,0.557052284425868,1.47302953737419,0.886135578334485,1.08321545506006,1.40900451698243,1.30059347559878,1.97325485524411,3.03985019564433,0.579606171470105,1.4828656316206,0.802622484269139,1.04535523804977,0.566546713487831,0.766440987203842,0,1.01207876807801,0.637130828648193,0.651083453856419,2.85135613334512,0.752875595388864,0.76791966692651,0,0.947109008176067,0.821127996921047,0.604820229674197,5.34880391567015,2.17236605824198,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.196468613246569,0,0,0,0.522389211897802,0.132957960518865,0.953962497221368,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,1.31780417436063,0,0,0,0,0,0.286836620748814,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2979 | |||
|description=CAGE_peak_at_chr10:11228276..11228288,+ | |||
|id=chr10:11228276..11228288,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.94e-32!172;CL:0000566!2.94e-32!172;CL:0002032!8.64e-29!165;CL:0000837!8.64e-29!165;CL:0000988!9.11e-29!182;CL:0000738!7.49e-28!140;CL:0002087!7.90e-22!119;CL:0002031!1.24e-20!124;CL:0000542!4.12e-17!53;CL:0000051!4.12e-17!53;CL:0000838!8.74e-17!52;CL:0000084!5.24e-13!25;CL:0000827!5.24e-13!25;CL:0000763!1.01e-12!112;CL:0000049!1.01e-12!112;CL:0000791!2.60e-11!18;CL:0000789!2.60e-11!18;CL:0002420!2.60e-11!18;CL:0002419!2.60e-11!18;CL:0000790!2.60e-11!18;CL:0000766!4.85e-09!76;CL:0002393!2.13e-08!9;CL:0002397!2.13e-08!9;CL:0000839!4.96e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0002393;8.61e-14;6!CL:0002397;8.61e-14;6!CL:0000623;1.73e-08;3!CL:0000875;2.17e-08;3!CL:0002396;2.17e-08;3!CL:0000226;4.02e-08;3!CL:0000842;4.02e-08;3!CL:0000094;1.32e-07;8!CL:0000542;4.87e-07;53!CL:0000624;6.31e-07;6!CL:0002087;7.75e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,2.11e-20,9;CL:0002397,2.11e-20,9;CL:0000037,1.21e-19,168;CL:0000738,5.76e-19,136;CL:0000988,5.04e-18,177;CL:0002032,1.37e-17,161;CL:0000837,1.37e-17,161;CL:0002087,1.81e-16,115;CL:0002031,4.13e-13,120;CL:0000838,3.02e-11,52;CL:0000542,6.02e-11,53;CL:0000051,6.02e-11,53;CL:0000623,8.52e-09,3;CL:0000825,8.52e-09,3;CL:0000875,1.92e-08,3;CL:0002396,1.92e-08,3;CL:0000763,5.64e-08,108;CL:0000049,5.64e-08,108;CL:0000226,5.80e-08,3;CL:0000842,5.80e-08,3;CL:0000766,7.95e-08,72;CL:0000094,2.20e-07,8;CL:0000624,3.87e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000051;4.87e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.00e-22!115;UBERON:0001049!3.91e-15!57;UBERON:0005068!3.91e-15!57;UBERON:0006241!3.91e-15!57;UBERON:0007135!3.91e-15!57;UBERON:0003080!1.03e-13!42;UBERON:0002780!3.16e-13!41;UBERON:0001890!3.16e-13!41;UBERON:0006240!3.16e-13!41;UBERON:0002616!9.80e-12!59;UBERON:0002020!1.28e-11!34;UBERON:0003528!1.28e-11!34;UBERON:0003075!2.42e-11!86;UBERON:0007284!2.42e-11!86;UBERON:0001893!2.67e-11!34;UBERON:0002791!3.41e-11!33;UBERON:0002619!1.07e-10!22;UBERON:0002346!1.42e-10!90;UBERON:0001869!1.84e-10!32;UBERON:0002390!3.04e-10!102;UBERON:0003061!3.04e-10!102;UBERON:0001017!4.08e-10!82;UBERON:0000956!4.43e-10!25;UBERON:0000203!4.43e-10!25;UBERON:0001950!1.31e-09!20;UBERON:0000955!1.61e-09!69;UBERON:0006238!1.61e-09!69;UBERON:0005743!2.34e-09!86;UBERON:0002193!4.25e-09!112;UBERON:0003056!1.50e-08!61;UBERON:0000073!1.76e-07!94;UBERON:0001016!1.76e-07!94;UBERON:0000178!5.46e-07!15;UBERON:0000179!5.46e-07!15;UBERON:0000463!5.46e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.18e-14;15!UBERON:0000179;1.18e-14;15!UBERON:0000463;1.18e-14;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.03e-15,15;UBERON:0000179,8.03e-15,15;UBERON:0000463,8.03e-15,15;UBERON:0002390,1.47e-08,98;UBERON:0003061,1.47e-08,98;UBERON:0002193,3.07e-07,108 | |||
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| |||
|short_description=p@chr10:11228276..11228288,+ | |||
}} |
Revision as of 11:44, 10 September 2013
Short description: | p@chr10:11228276..11228288, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:11228276..11228288, + |
Coexpression cluster: | C2979_Neutrophils_parietal_brain_occipital_CD4_CD14CD16_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 2.11e-20 | 9 |
CD14-positive, CD16-positive monocyte | 2.11e-20 | 9 |
hematopoietic stem cell | 1.21e-19 | 168 |
leukocyte | 5.76e-19 | 136 |
hematopoietic cell | 5.04e-18 | 177 |
hematopoietic oligopotent progenitor cell | 1.37e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.37e-17 | 161 |
nongranular leukocyte | 1.81e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 4.13e-13 | 120 |
lymphoid lineage restricted progenitor cell | 3.02e-11 | 52 |
lymphocyte | 6.02e-11 | 53 |
common lymphoid progenitor | 6.02e-11 | 53 |
natural killer cell | 8.52e-09 | 3 |
pro-NK cell | 8.52e-09 | 3 |
non-classical monocyte | 1.92e-08 | 3 |
CD14-low, CD16-positive monocyte | 1.92e-08 | 3 |
myeloid cell | 5.64e-08 | 108 |
common myeloid progenitor | 5.64e-08 | 108 |
single nucleate cell | 5.80e-08 | 3 |
mononuclear cell | 5.80e-08 | 3 |
myeloid leukocyte | 7.95e-08 | 72 |
granulocyte | 2.20e-07 | 8 |
CD4-positive, alpha-beta T cell | 3.87e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 8.03e-15 | 15 |
haemolymphatic fluid | 8.03e-15 | 15 |
organism substance | 8.03e-15 | 15 |
hematopoietic system | 1.47e-08 | 98 |
blood island | 1.47e-08 | 98 |
hemolymphoid system | 3.07e-07 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.