FFCP PHASE1:Hg19::chr11:2160500..2160515,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3481|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5466|TSSclassifier=S|UniProt=P01344|association_with_transcript=103bp_to_ENST00000416167_5end|coexpression_cluster_id=C172|description=CAGE_peak_47_at_IGF2_5end|id=chr11:2160500..2160515,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000349;8.48e-16;19!CL:0000669;1.17e-09;4!CL:0002541;5.00e-08;3|ontology_enrichment_celltype_v019_2=CL:0000349,1.01e-15,19;CL:0000669,1.55e-09,4;CL:0002541,6.12e-08,3|ontology_enrichment_development_v019=UBERON:0003104;6.60e-07;31|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!1.91e-10!14;UBERON:0000158!1.91e-10!14;UBERON:0000478!4.79e-10!24;UBERON:0004119!2.54e-08!169;UBERON:0000925!2.54e-08!169;UBERON:0006595!2.54e-08!169|ontology_enrichment_uberon_v019=UBERON:0000478;1.10e-16;24!UBERON:0005631;6.34e-15;10!UBERON:0000158;6.34e-15;10!UBERON:0000922;2.80e-12;49!UBERON:0000305;5.93e-09;7!UBERON:0003124;5.00e-08;3!UBERON:0000920;5.00e-08;3!UBERON:0005409;5.31e-08;22!UBERON:0004151;1.47e-07;3!UBERON:0000365;3.63e-07;5!UBERON:0000160;8.97e-07;17|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.31e-19,14;UBERON:0000158,6.31e-19,14;UBERON:0000478,1.30e-16,24;UBERON:0003124,1.00e-11,7;UBERON:0000305,5.94e-09,7;UBERON:0000920,6.12e-08,3;UBERON:0004871,9.12e-08,8;UBERON:0004151,1.69e-07,3;UBERON:0000365,3.90e-07,5;UBERON:0005409,6.74e-07,25;UBERON:0000160,7.54e-07,17|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0.872338524100369,0,0,0,0.245733936501509,0,5.67947567538448,4.74780560811216,0.247532705920093,0,0,0,0,0,0.123121058076788,0.816002764977012,0.940364164434263,0,0.136874425072884,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,1.53316637465883,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0.74000264525148,0.311211035399766,0,0,0.151357427644931,3.45705554687999,0,0,0,0,0,0,0,0,0.122834317311768,0,4.75201142912821,0.989067717114227,0,0,0,0.125118519871964,0,0,0.30648779579902,0.600952235626387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339121184620975,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0.590789906681404,0,3.93563003337963,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.112131084345361,0.87192013766656,0,0.129271715757778,3.57656445851882,0,0.26593811658487,0,0.257207374262142,1.41849132023278,0.532844358032199,0.714889968290738,9.76718889704597,1.64648067356154,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.49076596687656,0,0.271265023699736,1.24782516918484,0.892144943985809,0.788512075169673,1.52283839490527,0.902838299183157,0,3.10419213877515,0,0,0,10.9648648179135,16.4708843429211,0,0,0,1.21251028578504,0,6.95497674658265,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,7.97672367304707,0.40101294060657,0,0.68888668898764,0.182091168006717,0.655622074797121,0,0.0770153371044148,0,0,0,0,0,0.647747748306418,0,1.08378575017541,1.50506932156456,0,0,0,0.219259876645935,0,0,0.328014645699706,0,2.06082023295445,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0.255679882248303,4.62966585363034,0,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0.869932992075073,0,0,0,0.316379424718726,0.38126038784765,0,0.855877976067841,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0.392996164052485,0,0,0,0,0,0,0,0,0,1.41215701165169,1.29151611801369,0,2.21715076768338,4.36474460393223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.15436994738562,0,0,0,0,1.46508179271894,0,0,2.27308917445131,12.8922021758353,7.12715233998333,10.1363031692747,0,0,0,0,0,0.398495976502139,0.552567831062295,0.251932747854276,0,0,0,0,0,0,0.986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0,1.52581736317083,0,0,0.658156191461918,0,0,0.769502585037971,0,2.07507513949254,0,0,10.5270382711533,1.28236630762607,31.9820865611181,0,0,0,0,0,0,0,0,0,0,2.68570835724488,0,0,0.442287822516696,3.05515072466813,0,0,0,0,18.4592858878721,0,0,0,0,0.789168805698781,7.25944296291983,0,1.32691817219825,0,0.103688191397247,1.99396161812156,1.323967823502,0.627865836814451,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0.176512253383001,3.84167259326905,0,0,0,0.195551382734803,0,0,4.19600180122473,0,0,8.75134489096019,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0.458320848023367,2.15361907373044,1.59743200399193,1.71690419254628,0.446342914883745,1.81395375714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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3481 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |||
|TSSclassifier=S | |||
|UniProt=P01344 | |||
|association_with_transcript=103bp_to_ENST00000416167_5end | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_47_at_IGF2_5end | |||
|id=chr11:2160500..2160515,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;8.48e-16;19!CL:0000669;1.17e-09;4!CL:0002541;5.00e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.01e-15,19;CL:0000669,1.55e-09,4;CL:0002541,6.12e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0003104;6.60e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.91e-10!14;UBERON:0000158!1.91e-10!14;UBERON:0000478!4.79e-10!24;UBERON:0004119!2.54e-08!169;UBERON:0000925!2.54e-08!169;UBERON:0006595!2.54e-08!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.10e-16;24!UBERON:0005631;6.34e-15;10!UBERON:0000158;6.34e-15;10!UBERON:0000922;2.80e-12;49!UBERON:0000305;5.93e-09;7!UBERON:0003124;5.00e-08;3!UBERON:0000920;5.00e-08;3!UBERON:0005409;5.31e-08;22!UBERON:0004151;1.47e-07;3!UBERON:0000365;3.63e-07;5!UBERON:0000160;8.97e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.31e-19,14;UBERON:0000158,6.31e-19,14;UBERON:0000478,1.30e-16,24;UBERON:0003124,1.00e-11,7;UBERON:0000305,5.94e-09,7;UBERON:0000920,6.12e-08,3;UBERON:0004871,9.12e-08,8;UBERON:0004151,1.69e-07,3;UBERON:0000365,3.90e-07,5;UBERON:0005409,6.74e-07,25;UBERON:0000160,7.54e-07,17 | |||
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| |||
|short_description=p47@IGF2 | |||
}} |
Revision as of 17:13, 10 September 2013
Short description: | p47@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_47_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 103bp_to_ENST00000416167_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.01e-15 | 19 |
pericyte cell | 1.55e-09 | 4 |
chorionic membrane mesenchymal stem cell | 6.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 6.31e-19 | 14 |
membranous layer | 6.31e-19 | 14 |
extraembryonic structure | 1.30e-16 | 24 |
chorion | 1.00e-11 | 7 |
amnion | 5.94e-09 | 7 |
egg chorion | 6.12e-08 | 3 |
somatic layer of lateral plate mesoderm | 9.12e-08 | 8 |
cardiac chamber | 1.69e-07 | 3 |
urothelium | 3.90e-07 | 5 |
gastrointestinal system | 6.74e-07 | 25 |
intestine | 7.54e-07 | 17 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.