FFCP PHASE1:Hg19::chr12:6346930..6346972,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2228|description=CAGE_peak_at_chr12:6346930..6346972,+|id=chr12:6346930..6346972,+|ontology_enrichment_celltype=CL:0000066!3.86e-15!254;CL:0002078!2.82e-10!44;CL:0000115!3.12e-08!35;CL:0002139!4.35e-08!24;CL:0002321!4.29e-07!248;CL:0000220!4.58e-07!246;CL:0000071!5.88e-07!18;CL:0002546!5.88e-07!18|ontology_enrichment_celltype_v019=CL:0000115;3.12e-12;36!CL:0002139;8.99e-12;24!CL:0002078;3.35e-11;45!CL:0000071;4.78e-10;18!CL:1000413;1.65e-07;9|ontology_enrichment_celltype_v019_2=CL:0002078,5.15e-17,45;CL:0000066,5.03e-16,253;CL:0000115,1.67e-14,36;CL:0002139,2.04e-12,24;CL:0000071,2.36e-10,18;CL:0002546,2.36e-10,18;CL:0000213,7.13e-10,58;CL:0000215,7.13e-10,58;CL:1000413,5.63e-08,9;CL:0000076,1.86e-07,63|ontology_enrichment_development_v019=CL:0002546;4.78e-10;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!4.59e-15!659;UBERON:0000922!4.30e-13!612;UBERON:0000480!4.41e-13!626;UBERON:0000467!4.49e-13!625;UBERON:0002050!6.71e-12!605;UBERON:0005423!6.71e-12!605;UBERON:0000923!1.52e-11!604;UBERON:0005291!1.52e-11!604;UBERON:0006598!1.52e-11!604;UBERON:0002532!1.52e-11!604;UBERON:0000464!8.92e-10!104;UBERON:0000062!2.67e-09!511;UBERON:0000926!4.37e-09!448;UBERON:0004120!4.37e-09!448;UBERON:0006603!4.37e-09!448;UBERON:0004119!1.64e-08!169;UBERON:0000925!1.64e-08!169;UBERON:0006595!1.64e-08!169;UBERON:0004111!2.77e-08!241;UBERON:0001004!6.68e-08!72;UBERON:0001007!1.08e-07!155;UBERON:0001555!1.08e-07!155;UBERON:0007026!1.08e-07!155;UBERON:0000477!1.10e-07!286;UBERON:0001986!5.88e-07!18;UBERON:0004638!5.88e-07!18;UBERON:0004852!5.88e-07!18;UBERON:0000915!6.13e-07!52;UBERON:0000487!7.23e-07!22;UBERON:0000466!7.95e-07!126|ontology_enrichment_uberon_v019=UBERON:0004638;4.78e-10;18!UBERON:0001986;4.78e-10;18!UBERON:0004852;4.78e-10;18!UBERON:0000487;1.53e-09;22!UBERON:0006914;1.45e-08;25!UBERON:0003915;1.65e-07;9!UBERON:0004700;1.65e-07;9!UBERON:0001917;1.65e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.36e-10,18;UBERON:0001986,2.36e-10,18;UBERON:0004852,2.36e-10,18;UBERON:0000487,8.10e-10,22;UBERON:0006914,5.85e-09,25;UBERON:0003915,5.63e-08,9;UBERON:0004700,5.63e-08,9;UBERON:0001917,5.63e-08,9|phase1_expression=0.54503513781167,0.214100523890983,0,0,0,1.74467704820074,0,0,0,1.47440361900905,5.58240934377942,1.09220686065086,1.05506791291381,1.23766352960047,1.98838425436749,2.6893005858071,1.20538905604795,0.730310090387373,0.975865597581014,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0.547497700291537,0.502170558379211,0,0.164201178899891,0,1.96682138424452,0,0.154816123316076,1.83884244895785,0.90361775633475,1.84877005083394,0,0,0,0,0,0,1.56740831967947,1.29557466407592,1.03030227053675,0.581592955118259,1.88937971844405,1.4555043671269,0.929716147622738,1.6446715520873,0,0.28769239232215,0.768482119587302,0,1.37898272294647,0.645484683583826,0,0.752969358170419,2.45615535052061,1.57306439111559,1.22433556948361,0.641858054152187,1.27867425159808,0.329851300186716,0.797854630486527,0,0,0.56738522469114,0.622822248995575,0.251248665256743,1.5644487552606,0.434377689410233,0,0,0.316462387440884,0.211255286311942,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0.954053754535364,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0.12786256184353,0.722878304769133,0.50133791063589,1.01392563272577,0,1.45990461090791,0.378139268656271,0.221729397462564,0.351339142772504,0.327447688744282,2.91436230634034,3.70784442784429,0,1.0447784237956,0.398873881556595,0,0,0,1.98762407366705,4.30117297553062,2.77712401286075,5.6530794192401,2.09749718104953,1.92582629358047,2.29894463190492,2.58416759169329,1.77883131343355,0,2.01414658554573,5.32190474002959,4.14905497831888,2.57364156242108,8.91156142669936,1.42879565254528,2.69435247151404,1.35133776579987,0,0,4.946447086121,0,0,1.74437620857014,0,0.633152558322899,0.794455084879313,0.573673241497627,0.709336764396714,2.80338800071154,0,0.24666754841716,0.311211035399766,0.404132016209064,0.490385709340376,0.302714855289863,0,0,1.24864030732128,1.1409436430889,0.747243402759005,0.352303495931295,0,0.140450806702248,0.61246251376468,1.47401180774122,1.34323515528495,0,1.23633464639278,0,0.718618141816238,0.505008341862199,0.625592599359821,0.277064115484183,0,1.22595118319608,1.80285670687916,0.340296549480063,0.179389635688862,0,0,0.600182192168805,0.103052529238439,0,0.37223371266318,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0.355009592516614,0,0,2.70565194428616,1.90922284413584,4.58887352622406,0.731842236777572,0.397589304964456,2.32387885739037,0.932949495138334,1.7662459561294,2.18986415445498,0,0.643240938192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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2228 | |||
|description=CAGE_peak_at_chr12:6346930..6346972,+ | |||
|id=chr12:6346930..6346972,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.86e-15!254;CL:0002078!2.82e-10!44;CL:0000115!3.12e-08!35;CL:0002139!4.35e-08!24;CL:0002321!4.29e-07!248;CL:0000220!4.58e-07!246;CL:0000071!5.88e-07!18;CL:0002546!5.88e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000115;3.12e-12;36!CL:0002139;8.99e-12;24!CL:0002078;3.35e-11;45!CL:0000071;4.78e-10;18!CL:1000413;1.65e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,5.15e-17,45;CL:0000066,5.03e-16,253;CL:0000115,1.67e-14,36;CL:0002139,2.04e-12,24;CL:0000071,2.36e-10,18;CL:0002546,2.36e-10,18;CL:0000213,7.13e-10,58;CL:0000215,7.13e-10,58;CL:1000413,5.63e-08,9;CL:0000076,1.86e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;4.78e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!4.59e-15!659;UBERON:0000922!4.30e-13!612;UBERON:0000480!4.41e-13!626;UBERON:0000467!4.49e-13!625;UBERON:0002050!6.71e-12!605;UBERON:0005423!6.71e-12!605;UBERON:0000923!1.52e-11!604;UBERON:0005291!1.52e-11!604;UBERON:0006598!1.52e-11!604;UBERON:0002532!1.52e-11!604;UBERON:0000464!8.92e-10!104;UBERON:0000062!2.67e-09!511;UBERON:0000926!4.37e-09!448;UBERON:0004120!4.37e-09!448;UBERON:0006603!4.37e-09!448;UBERON:0004119!1.64e-08!169;UBERON:0000925!1.64e-08!169;UBERON:0006595!1.64e-08!169;UBERON:0004111!2.77e-08!241;UBERON:0001004!6.68e-08!72;UBERON:0001007!1.08e-07!155;UBERON:0001555!1.08e-07!155;UBERON:0007026!1.08e-07!155;UBERON:0000477!1.10e-07!286;UBERON:0001986!5.88e-07!18;UBERON:0004638!5.88e-07!18;UBERON:0004852!5.88e-07!18;UBERON:0000915!6.13e-07!52;UBERON:0000487!7.23e-07!22;UBERON:0000466!7.95e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.78e-10;18!UBERON:0001986;4.78e-10;18!UBERON:0004852;4.78e-10;18!UBERON:0000487;1.53e-09;22!UBERON:0006914;1.45e-08;25!UBERON:0003915;1.65e-07;9!UBERON:0004700;1.65e-07;9!UBERON:0001917;1.65e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.36e-10,18;UBERON:0001986,2.36e-10,18;UBERON:0004852,2.36e-10,18;UBERON:0000487,8.10e-10,22;UBERON:0006914,5.85e-09,25;UBERON:0003915,5.63e-08,9;UBERON:0004700,5.63e-08,9;UBERON:0001917,5.63e-08,9 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0,0,0,1.74467704820074,0,0,0,1.47440361900905,5.58240934377942,1.09220686065086,1.05506791291381,1.23766352960047,1.98838425436749,2.6893005858071,1.20538905604795,0.730310090387373,0.975865597581014,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0.547497700291537,0.502170558379211,0,0.164201178899891,0,1.96682138424452,0,0.154816123316076,1.83884244895785,0.90361775633475,1.84877005083394,0,0,0,0,0,0,1.56740831967947,1.29557466407592,1.03030227053675,0.581592955118259,1.88937971844405,1.4555043671269,0.929716147622738,1.6446715520873,0,0.28769239232215,0.768482119587302,0,1.37898272294647,0.645484683583826,0,0.752969358170419,2.45615535052061,1.57306439111559,1.22433556948361,0.641858054152187,1.27867425159808,0.329851300186716,0.797854630486527,0,0,0.56738522469114,0.622822248995575,0.251248665256743,1.5644487552606,0.434377689410233,0,0,0.316462387440884,0.211255286311942,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0.954053754535364,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0.12786256184353,0.722878304769133,0.50133791063589,1.01392563272577,0,1.45990461090791,0.378139268656271,0.221729397462564,0.351339142772504,0.327447688744282,2.91436230634034,3.70784442784429,0,1.0447784237956,0.398873881556595,0,0,0,1.98762407366705,4.30117297553062,2.77712401286075,5.6530794192401,2.09749718104953,1.92582629358047,2.29894463190492,2.58416759169329,1.77883131343355,0,2.01414658554573,5.32190474002959,4.14905497831888,2.57364156242108,8.91156142669936,1.42879565254528,2.69435247151404,1.35133776579987,0,0,4.946447086121,0,0,1.74437620857014,0,0.633152558322899,0.794455084879313,0.573673241497627,0.709336764396714,2.80338800071154,0,0.24666754841716,0.311211035399766,0.404132016209064,0.490385709340376,0.302714855289863,0,0,1.24864030732128,1.1409436430889,0.747243402759005,0.352303495931295,0,0.140450806702248,0.61246251376468,1.47401180774122,1.34323515528495,0,1.23633464639278,0,0.718618141816238,0.505008341862199,0.625592599359821,0.277064115484183,0,1.22595118319608,1.80285670687916,0.340296549480063,0.179389635688862,0,0,0.600182192168805,0.103052529238439,0,0.37223371266318,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0.355009592516614,0,0,2.70565194428616,1.90922284413584,4.58887352622406,0.731842236777572,0.397589304964456,2.32387885739037,0.932949495138334,1.7662459561294,2.18986415445498,0,0.643240938192885,0,0,0.721879481669586,1.53798840051797,1.85443159085912,2.41011029883482,0.55146986366197,0.435758888184812,0.474541238222193,1.34831308160164,0.98110732562673,0.38474715694639,2.21446636387394,0,0.8231480226628,1.47008711385542,0,0,0,0,0.368965315629341,0,2.41450627898976,0,1.40740561376283,0.555530670951178,0,4.15973914111831,0,0,0.352226082707465,1.58803092537181,2.77791307545966,2.66355813128438,2.37061319387782,1.71697232418975,1.96973604869918,2.10603838625314,2.67536092119711,1.87467667973554,1.34385702559088,0.567100388969546,0.806026704325635,0.290633938513962,0.766765358330422,0,0.968532774145487,0.207328115540772,1.29707958075265,1.13618190083742,0.761974731506028,1.90994212779139,2.34434894420094,3.4214489204541,1.43958489784653,2.70308752059526,0.285826432630578,0.112131084345361,0,0,0.904902010304444,0,0,0,1.04007436911366,0,1.41849132023278,0,0,0,0,0.325736184293735,0,0.791951872933429,2.1100756394171,0,1.3996218765488,12.162378064119,12.5564272858032,33.7334303172851,0.239624855491583,2.29723871668228,0,0.434343920002738,0.821905290201534,0.358121926479791,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,5.9832291840805,0.414415513436035,0.736148950314839,1.50051156317903,0.271265023699736,2.70362119990049,1.96271887676878,1.26161932027148,1.28855556491985,0.601892199455438,0,0,0,0.368738337083406,0.955719759148911,0.195801157462741,0,0,0,0,0,0,0.907170879989041,0.248107807818777,0,0.561320188866147,0.768834895534206,0.511707249066704,0.482561763430822,1.48418066444991,0.154209693802656,0,0.246381468041427,0,0.232420756919918,0.120859449591622,3.20810352485256,0.644566922551274,0.459257792658427,0.728364672026868,0.655622074797121,3.15839729035188,0.770153371044148,0.784349769176855,0,0.105551628892876,1.13733384070897,7.31402932689017,3.02282282542995,1.54227252690289,0.812839312631559,0,2.54876273045038,1.66215201785745,1.56712328305525,0.219259876645935,0,0.512900250232778,0.328014645699706,0,0.412164046590889,0.0915694648183434,0.082509499920588,0,0,0,0.290012154876366,0.154048617114644,0.307007349452259,0,0,0,0.170453254832202,0,0.991709492165869,1.15314040419064,1.14851441245126,3.74283789165535,0,0.62962469366128,0,0.616067160352178,0.532306030317022,0.869932992075073,0,0.858749320451947,0,0.632758849437452,0.190630193923825,0.767693373934002,0,0,1.56989728039846,0.359744915166629,0,0.353437207037059,1.01091240786658,7.92551605865041,0.842516912477962,1.46290121726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| |||
|short_description=p@chr12:6346930..6346972,+ | |||
}} |
Revision as of 23:51, 10 September 2013
Short description: | p@chr12:6346930..6346972, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:6346930..6346972, + |
Coexpression cluster: | C2228_Monocytederived_seminal_leiomyoma_Renal_Wilms_Endothelial_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 5.15e-17 | 45 |
epithelial cell | 5.03e-16 | 253 |
endothelial cell | 1.67e-14 | 36 |
endothelial cell of vascular tree | 2.04e-12 | 24 |
blood vessel endothelial cell | 2.36e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.36e-10 | 18 |
lining cell | 7.13e-10 | 58 |
barrier cell | 7.13e-10 | 58 |
endothelial cell of artery | 5.63e-08 | 9 |
squamous epithelial cell | 1.86e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.36e-10 | 18 |
endothelium | 2.36e-10 | 18 |
cardiovascular system endothelium | 2.36e-10 | 18 |
simple squamous epithelium | 8.10e-10 | 22 |
squamous epithelium | 5.85e-09 | 25 |
endothelial tube | 5.63e-08 | 9 |
arterial system endothelium | 5.63e-08 | 9 |
endothelium of artery | 5.63e-08 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.