FFCP PHASE1:Hg19::chr12:27977018..27977041,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C682|description=CAGE_peak_at_chr12:27977018..27977041,-|id=chr12:27977018..27977041,-|ontology_enrichment_celltype=CL:0000945!7.14e-80!24;CL:0000826!7.14e-80!24;CL:0000236!1.46e-61!14;CL:0000542!3.25e-38!53;CL:0000051!3.25e-38!53;CL:0000838!7.45e-35!52;CL:0002087!2.47e-18!119;CL:0002031!1.36e-15!124;CL:0000738!5.94e-15!140;CL:0002032!4.80e-12!165;CL:0000837!4.80e-12!165;CL:0000037!2.21e-11!172;CL:0000566!2.21e-11!172;CL:0000988!1.60e-10!182;CL:0002619!5.97e-09!3;CL:0000819!1.18e-07!1|ontology_enrichment_celltype_v019=CL:0000945;4.15e-91;24!CL:0000236;3.12e-80;13!CL:0000542;2.58e-32;53!CL:0000785;2.25e-14;1!CL:0000819;2.25e-14;1!CL:0002087;2.04e-07;104|ontology_enrichment_celltype_v019_2=CL:0000945,4.48e-91,24;CL:0000826,4.48e-91,24;CL:0000236,1.56e-74,14;CL:0000838,2.02e-41,52;CL:0000542,1.29e-40,53;CL:0000051,1.29e-40,53;CL:0002087,7.82e-18,115;CL:0002031,4.89e-17,120;CL:0000738,7.06e-15,136;CL:0000819,1.61e-14,1;CL:0002032,2.37e-12,161;CL:0000837,2.37e-12,161;CL:0000037,8.92e-12,168;CL:0000988,4.20e-11,177;CL:0000785,6.58e-08,2;CL:0000955,6.58e-08,2;CL:0000818,6.58e-08,2;CL:0000954,6.58e-08,2;CL:0000816,6.58e-08,2|ontology_enrichment_development_v019=CL:0000051;2.58e-32;53!UBERON:0001045;9.36e-15;1!CL:0000954;7.78e-08;2|ontology_enrichment_disease=DOID:0060058!1.79e-10!10;DOID:0060073!1.18e-07!1;DOID:8675!1.18e-07!1;DOID:12603!1.83e-07!1|ontology_enrichment_disease_v019=DOID:0060058;9.53e-22;10!DOID:0060073;2.25e-14;1!DOID:8675;2.25e-14;1|ontology_enrichment_disease_v019_2=DOID:0060058,9.80e-22,10;DOID:0060073,1.61e-14,1;DOID:8675,1.61e-14,1|ontology_enrichment_uberon=UBERON:0001154!7.50e-08!1;UBERON:0001153!7.50e-08!1;UBERON:0002372!1.03e-07!1;UBERON:0001961!1.03e-07!1;UBERON:0001744!1.03e-07!1;UBERON:0001735!1.03e-07!1;UBERON:0002171!2.83e-07!1;UBERON:0006518!2.83e-07!1;UBERON:0008949!2.83e-07!1;UBERON:0000101!2.83e-07!1;UBERON:0002167!2.83e-07!1;UBERON:0002146!3.01e-07!1;UBERON:0005623!3.01e-07!1|ontology_enrichment_uberon_v019=UBERON:0002372;9.36e-15;1!UBERON:0001154;9.36e-15;1!UBERON:0001153;9.36e-15;1!UBERON:0009854;9.36e-15;1!UBERON:0001961;9.36e-15;1!UBERON:0001744;9.36e-15;1!UBERON:0001042;9.36e-15;1!UBERON:0001735;9.36e-15;1!UBERON:0006562;5.01e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0001154,6.22e-15,1;UBERON:0001153,6.22e-15,1;UBERON:0001045,6.22e-15,1;UBERON:0002372,1.23e-14,1;UBERON:0001961,1.23e-14,1;UBERON:0001744,1.23e-14,1;UBERON:0001735,1.23e-14,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,2.16908161624845,5.11809236954717,0,0,0,0,0.223915474239924,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,2.66852776159066,0.426730222566507,2.40237592221607,1.14950487990897,1.32208974556972,0.954053754535364,1.70763890732835,1.76171156811282,2.6759125968766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0,0,0,0,0,0,0,0.929015875628594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76283915531148,0,0,2.46169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0.592834895693833,3.0448149595224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,2.22261774948139,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0|short_description=p@chr12:27977018..27977041,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C682 | |||
|description=CAGE_peak_at_chr12:27977018..27977041,- | |||
|id=chr12:27977018..27977041,- | |||
|ontology_enrichment_celltype=CL:0000945!7.14e-80!24;CL:0000826!7.14e-80!24;CL:0000236!1.46e-61!14;CL:0000542!3.25e-38!53;CL:0000051!3.25e-38!53;CL:0000838!7.45e-35!52;CL:0002087!2.47e-18!119;CL:0002031!1.36e-15!124;CL:0000738!5.94e-15!140;CL:0002032!4.80e-12!165;CL:0000837!4.80e-12!165;CL:0000037!2.21e-11!172;CL:0000566!2.21e-11!172;CL:0000988!1.60e-10!182;CL:0002619!5.97e-09!3;CL:0000819!1.18e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.15e-91;24!CL:0000236;3.12e-80;13!CL:0000542;2.58e-32;53!CL:0000785;2.25e-14;1!CL:0000819;2.25e-14;1!CL:0002087;2.04e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.48e-91,24;CL:0000826,4.48e-91,24;CL:0000236,1.56e-74,14;CL:0000838,2.02e-41,52;CL:0000542,1.29e-40,53;CL:0000051,1.29e-40,53;CL:0002087,7.82e-18,115;CL:0002031,4.89e-17,120;CL:0000738,7.06e-15,136;CL:0000819,1.61e-14,1;CL:0002032,2.37e-12,161;CL:0000837,2.37e-12,161;CL:0000037,8.92e-12,168;CL:0000988,4.20e-11,177;CL:0000785,6.58e-08,2;CL:0000955,6.58e-08,2;CL:0000818,6.58e-08,2;CL:0000954,6.58e-08,2;CL:0000816,6.58e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000051;2.58e-32;53!UBERON:0001045;9.36e-15;1!CL:0000954;7.78e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.79e-10!10;DOID:0060073!1.18e-07!1;DOID:8675!1.18e-07!1;DOID:12603!1.83e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060058;9.53e-22;10!DOID:0060073;2.25e-14;1!DOID:8675;2.25e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,9.80e-22,10;DOID:0060073,1.61e-14,1;DOID:8675,1.61e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0001154!7.50e-08!1;UBERON:0001153!7.50e-08!1;UBERON:0002372!1.03e-07!1;UBERON:0001961!1.03e-07!1;UBERON:0001744!1.03e-07!1;UBERON:0001735!1.03e-07!1;UBERON:0002171!2.83e-07!1;UBERON:0006518!2.83e-07!1;UBERON:0008949!2.83e-07!1;UBERON:0000101!2.83e-07!1;UBERON:0002167!2.83e-07!1;UBERON:0002146!3.01e-07!1;UBERON:0005623!3.01e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;9.36e-15;1!UBERON:0001154;9.36e-15;1!UBERON:0001153;9.36e-15;1!UBERON:0009854;9.36e-15;1!UBERON:0001961;9.36e-15;1!UBERON:0001744;9.36e-15;1!UBERON:0001042;9.36e-15;1!UBERON:0001735;9.36e-15;1!UBERON:0006562;5.01e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,6.22e-15,1;UBERON:0001153,6.22e-15,1;UBERON:0001045,6.22e-15,1;UBERON:0002372,1.23e-14,1;UBERON:0001961,1.23e-14,1;UBERON:0001744,1.23e-14,1;UBERON:0001735,1.23e-14,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,2.16908161624845,5.11809236954717,0,0,0,0,0.223915474239924,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,2.66852776159066,0.426730222566507,2.40237592221607,1.14950487990897,1.32208974556972,0.954053754535364,1.70763890732835,1.76171156811282,2.6759125968766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0,0,0,0,0,0,0,0.929015875628594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76283915531148,0,0,2.46169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0.592834895693833,3.0448149595224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,2.22261774948139,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr12:27977018..27977041,- | |||
}} |
Revision as of 22:20, 10 September 2013
Short description: | p@chr12:27977018..27977041, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:27977018..27977041, - |
Coexpression cluster: | C682_Burkitt_lymphoma_CD19_appendix_tonsil_spleen_diffuse |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.48e-91 | 24 |
pro-B cell | 4.48e-91 | 24 |
B cell | 1.56e-74 | 14 |
lymphoid lineage restricted progenitor cell | 2.02e-41 | 52 |
lymphocyte | 1.29e-40 | 53 |
common lymphoid progenitor | 1.29e-40 | 53 |
nongranular leukocyte | 7.82e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 4.89e-17 | 120 |
leukocyte | 7.06e-15 | 136 |
B-1 B cell | 1.61e-14 | 1 |
hematopoietic oligopotent progenitor cell | 2.37e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.37e-12 | 161 |
hematopoietic stem cell | 8.92e-12 | 168 |
hematopoietic cell | 4.20e-11 | 177 |
mature B cell | 6.58e-08 | 2 |
pre-B-II cell | 6.58e-08 | 2 |
transitional stage B cell | 6.58e-08 | 2 |
small pre-B-II cell | 6.58e-08 | 2 |
immature B cell | 6.58e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 6.22e-15 | 1 |
caecum | 6.22e-15 | 1 |
midgut | 6.22e-15 | 1 |
tonsil | 1.23e-14 | 1 |
mucosa-associated lymphoid tissue | 1.23e-14 | 1 |
lymphoid tissue | 1.23e-14 | 1 |
tonsillar ring | 1.23e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 9.80e-22 | 10 |
lymphatic system cancer | 1.61e-14 | 1 |
lymphosarcoma | 1.61e-14 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.