FFCP PHASE1:Hg19::chr12:53873481..53873494,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:53873481..53873494,+|id=chr12:53873481..53873494,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000228;1.66e-15;1!CL:0002372;1.66e-15;1!CL:0002363;1.29e-08;2!CL:0000575;2.07e-08;2|ontology_enrichment_celltype_v019_2=CL:0000228,8.63e-16,1;CL:0002372,8.63e-16,1;CL:0002363,1.29e-08,2;CL:0000008,1.29e-08,2;CL:0000575,2.67e-08,2|ontology_enrichment_development_v019=CL:0000008;1.29e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000964;2.47e-15;4!UBERON:0010409;2.47e-15;4!UBERON:0003566;1.29e-08;2!UBERON:0001777;1.29e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0000964,3.18e-15,4;UBERON:0010409,3.18e-15,4;UBERON:0004348,3.18e-15,4;UBERON:0005427,3.18e-15,4;UBERON:0003566,1.29e-08,2;UBERON:0001777,1.29e-08,2|phase1_expression=0,0,0,0,1.34088328328186,0.872338524100369,0,0,0,0,0,0.655324116390517,0,0.618831764800233,0,0,1.20538905604795,0,0.975865597581014,0.123121058076788,0.612002073732759,0.313454721478088,0.286235987131057,0.136874425072884,0,0.152826811495903,0.0821005894499457,0.236132343941038,0,0,0.309632246632152,0.919421224478927,0.6024118375565,0,0,0,0.293600439334847,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0.242584061187816,0.232429036905685,0.822335776043652,0,0,0,0.236482229888585,0,0.645484683583826,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,1.5644487552606,0,0,0,0,0.211255286311942,0,0.209658645508376,0,0.450530678524519,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,1.1384259382189,1.17447437874188,0.382273228125229,0,0,0.263384084775077,0.196709770113833,0,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0,0.384273959177026,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0.361439152384566,0.50133791063589,0.144846518960824,0,0.486634870302636,0,0,0,0.0654895377488563,1.09288586487763,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0.825354125820202,0.208994966536811,0,0,0,0,0.760272105718513,0,0.367663080345869,0,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,1.06748995729705,0,0,0.404132016209064,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0.23486899728753,0.647491777472526,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194874010322397,0.252433774244115,0.184099797284599,0.646584227275248,0.355009592516614,0.201504196455281,0,0,0,0,0.121973706129595,0.132529768321485,0,0.207322110030741,0.756962552626885,0,0,1.28648187638577,0,0.464367928031979,0,0.118306800039844,0,0,0.220587945464788,0.653638332277218,0,0.404493924480493,0.196221465125346,0.769494313892781,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0.301586917234893,0,0.325808305310325,2.07986957055916,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0,0,0.25248486685276,0,0,1.17217447210047,0,0,0,0,0.112131084345361,0.43596006883328,0,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0.355391948742546,0.791951872933429,0,0,0.199945982364114,0,0,0,0,0,1.42636905040718,0,0,0.179060963239896,0,0,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0.813795071099207,0.831883446123229,0,0.473107245101804,0.234282829985426,0.300946099727719,0,0,0,0,0.173767228936166,0.587403472388222,0.343143423810856,0,0.431428401637234,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0.462629081407967,0.177561725313127,0,0,0.581051892299796,0.120859449591622,0,0.0920809889358963,0,0.182091168006717,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0.680374821106063,0,0,0,0,0.509752546090077,0,0.223874754722178,0.219259876645935,0,0.512900250232778,0.328014645699706,0.325378394664303,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0,0.616194468458578,0.307007349452259,0.275673144969061,0.107420244868274,0,0.255679882248303,0.178064071293475,0,0,0.127612712494584,0,0,0,0,3.08033580176089,0,0,0.18532421910392,0,0,0,0,0.255897791311334,0,0,0,0.359744915166629,0,0.235624804691373,0.202182481573316,0,0.421258456238981,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0.876901770507525,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0.354761064070598,0,0.658589785919804,0.379473173765715,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0.399158742865633,0,0.635020748171649,0.324621940274555,0,0,0.156679895773023,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0.18714054040822,0.146508179271894,0,0.222886768554957,0,0.23874448473769,0,0,0,0.140669416410513,0.111308705022906,0.16480387422676,0.211125408127993,0.19924798825107,0,0,0.102268682502155,0,0,0.0898683511473268,0.17902117467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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:53873481..53873494,+ | |||
|id=chr12:53873481..53873494,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000228;1.66e-15;1!CL:0002372;1.66e-15;1!CL:0002363;1.29e-08;2!CL:0000575;2.07e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,8.63e-16,1;CL:0002372,8.63e-16,1;CL:0002363,1.29e-08,2;CL:0000008,1.29e-08,2;CL:0000575,2.67e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000008;1.29e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000964;2.47e-15;4!UBERON:0010409;2.47e-15;4!UBERON:0003566;1.29e-08;2!UBERON:0001777;1.29e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000964,3.18e-15,4;UBERON:0010409,3.18e-15,4;UBERON:0004348,3.18e-15,4;UBERON:0005427,3.18e-15,4;UBERON:0003566,1.29e-08,2;UBERON:0001777,1.29e-08,2 | |||
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| |||
|short_description=p@chr12:53873481..53873494,+ | |||
}} |
Revision as of 23:18, 10 September 2013
Short description: | p@chr12:53873481..53873494, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:53873481..53873494, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 8.63e-16 | 1 |
myotube | 8.63e-16 | 1 |
keratocyte | 1.29e-08 | 2 |
migratory cranial neural crest cell | 1.29e-08 | 2 |
corneal epithelial cell | 2.67e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cornea | 3.18e-15 | 4 |
eye surface | 3.18e-15 | 4 |
optic eminence | 3.18e-15 | 4 |
corneal primordium | 3.18e-15 | 4 |
head connective tissue | 1.29e-08 | 2 |
substantia propria of cornea | 1.29e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.