FFCP PHASE1:Hg19::chr13:48611665..48611708,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55270|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23063|TSSclassifier=S|UniProt=Q9NV35|association_with_transcript=0bp_to_ENST00000258662,NM_018283,uc001vbv.2,uc001vbw.1_5end|coexpression_cluster_id=C425|description=CAGE_peak_3_at_NUDT15_5end|id=chr13:48611665..48611708,+|ontology_enrichment_celltype=CL:0000066!3.12e-19!254;CL:0002322!2.54e-07!5|ontology_enrichment_celltype_v019=CL:0002322;3.60e-30;5!CL:0002321;6.59e-10;15!CL:0000148;1.01e-09;10!CL:0000540;1.15e-09;6!CL:0000404;1.15e-09;6!CL:0000039;2.46e-08;7!CL:0000586;2.46e-08;7!CL:0000147;5.85e-07;14!CL:0000817;7.29e-07;1|ontology_enrichment_celltype_v019_2=CL:0002322,3.71e-30,5;CL:0000148,9.38e-10,10;CL:0000541,9.38e-10,10;CL:0000540,1.15e-09,6;CL:0000031,1.15e-09,6;CL:0000404,1.15e-09,6;CL:0000039,2.46e-08,7;CL:0000586,2.46e-08,7;CL:0000047,2.36e-07,8;CL:0000147,5.54e-07,14|ontology_enrichment_development_v019=UBERON:0009117;9.16e-10;10!UBERON:0005564;9.16e-10;10!CL:0000031;1.15e-09;6|ontology_enrichment_disease=DOID:162!4.62e-24!235;DOID:305!5.51e-24!106;DOID:14566!7.74e-23!239;DOID:0050687!8.98e-22!143;DOID:299!5.06e-08!25;DOID:0050686!5.31e-08!137|ontology_enrichment_disease_v019=DOID:3095;5.15e-09;22!DOID:2994;5.15e-09;22!DOID:2355;7.29e-07;1|ontology_enrichment_disease_v019_2=DOID:305,2.81e-10,106;DOID:3095,5.15e-09,22;DOID:2994,5.15e-09,22;DOID:162,6.92e-08,235;DOID:0050687,7.48e-08,143;DOID:14566,1.26e-07,239;DOID:2355,8.18e-07,1|ontology_enrichment_uberon=UBERON:0001737!7.51e-10!9|ontology_enrichment_uberon_v019=UBERON:0000473;2.41e-07;8!UBERON:0000997;7.29e-07;1!UBERON:0005056;7.29e-07;1!UBERON:0004176;7.29e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.42e-07,8;UBERON:0000997,9.73e-07,1;UBERON:0005056,9.73e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.436882744260345,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,2.40148321798935,3.69640004467296,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.189069634328136,0,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0.272746120590835,0,12.6852654374779,5.56625026950238,18.1262550876449,19.9029225629511,12.6160425437814,2.91981887260664,0,0,0,0,0,0.828147600278907,0.842923450390509,0.241011029883482,0.330881918197182,0.871517776369625,0.949082476444386,1.07865046528132,0.98110732562673,1.53898862778556,0,0,0,0,0,0,0,0,0.122988438543114,0.514703430895577,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0,0,0.761016608938393,0,0,0.246217006087397,0,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0.581267877027924,0.383382679165211,0,0,0.414656231081544,0,0.25248486685276,0.190493682876507,0,0,1.71072446022705,0.102827492703324,0,0.285826432630578,0,0,0.2933531432838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0.308061348417659,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0,0.325378394664303,0,0.183138929636687,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,21.1745568157939,1.47024129588619,0.185803175125719,1.15415370381156,0,0.318852545457645,0,0,0.423347165447766,0.324621940274555,0.280797178113459,0,0,0,0.338583555603207,0,0.605399121573143,0.425846237690326,0.343505344755765,0,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0.18714054040822,0,0,0,0,0.71623345421307,0,0,0,0,0,0,0.422250816255987,0,0,0,0.102268682502155,0.492339221844278,0,0.179736702294654,0,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0.269272933229316,0.108647371922008,1.5950057986596,0.0915975934018623,0,0,0,0,0,0,0,0.37950746544837,0,0.843992258112108,2.12202650606892,0,5.62610463329437,0.995261931078505,0.0884575645033392,0,0,0.123563938946503,0.104421949505455,0,0,0,0.364909578431332,0.978323094660449,0.242780379534093,0,0,0,0,0.300646838828985,0.622129148383483,0,0,0,0,0.284609546029793,0.1386746730131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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55270 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23063 | |||
|TSSclassifier=S | |||
|UniProt=Q9NV35 | |||
|association_with_transcript=0bp_to_ENST00000258662,NM_018283,uc001vbv.2,uc001vbw.1_5end | |||
|coexpression_cluster_id=C425 | |||
|description=CAGE_peak_3_at_NUDT15_5end | |||
|id=chr13:48611665..48611708,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.12e-19!254;CL:0002322!2.54e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.60e-30;5!CL:0002321;6.59e-10;15!CL:0000148;1.01e-09;10!CL:0000540;1.15e-09;6!CL:0000404;1.15e-09;6!CL:0000039;2.46e-08;7!CL:0000586;2.46e-08;7!CL:0000147;5.85e-07;14!CL:0000817;7.29e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.71e-30,5;CL:0000148,9.38e-10,10;CL:0000541,9.38e-10,10;CL:0000540,1.15e-09,6;CL:0000031,1.15e-09,6;CL:0000404,1.15e-09,6;CL:0000039,2.46e-08,7;CL:0000586,2.46e-08,7;CL:0000047,2.36e-07,8;CL:0000147,5.54e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.16e-10;10!UBERON:0005564;9.16e-10;10!CL:0000031;1.15e-09;6 | |||
|ontology_enrichment_disease=DOID:162!4.62e-24!235;DOID:305!5.51e-24!106;DOID:14566!7.74e-23!239;DOID:0050687!8.98e-22!143;DOID:299!5.06e-08!25;DOID:0050686!5.31e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:3095;5.15e-09;22!DOID:2994;5.15e-09;22!DOID:2355;7.29e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.81e-10,106;DOID:3095,5.15e-09,22;DOID:2994,5.15e-09,22;DOID:162,6.92e-08,235;DOID:0050687,7.48e-08,143;DOID:14566,1.26e-07,239;DOID:2355,8.18e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!7.51e-10!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.41e-07;8!UBERON:0000997;7.29e-07;1!UBERON:0005056;7.29e-07;1!UBERON:0004176;7.29e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.42e-07,8;UBERON:0000997,9.73e-07,1;UBERON:0005056,9.73e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.436882744260345,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,2.40148321798935,3.69640004467296,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.189069634328136,0,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0.272746120590835,0,12.6852654374779,5.56625026950238,18.1262550876449,19.9029225629511,12.6160425437814,2.91981887260664,0,0,0,0,0,0.828147600278907,0.842923450390509,0.241011029883482,0.330881918197182,0.871517776369625,0.949082476444386,1.07865046528132,0.98110732562673,1.53898862778556,0,0,0,0,0,0,0,0,0.122988438543114,0.514703430895577,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0,0,0.761016608938393,0,0,0.246217006087397,0,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0.581267877027924,0.383382679165211,0,0,0.414656231081544,0,0.25248486685276,0.190493682876507,0,0,1.71072446022705,0.102827492703324,0,0.285826432630578,0,0,0.2933531432838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0.308061348417659,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0,0.325378394664303,0,0.183138929636687,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,21.1745568157939,1.47024129588619,0.185803175125719,1.15415370381156,0,0.318852545457645,0,0,0.423347165447766,0.324621940274555,0.280797178113459,0,0,0,0.338583555603207,0,0.605399121573143,0.425846237690326,0.343505344755765,0,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0.18714054040822,0,0,0,0,0.71623345421307,0,0,0,0,0,0,0.422250816255987,0,0,0,0.102268682502155,0.492339221844278,0,0.179736702294654,0,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0.269272933229316,0.108647371922008,1.5950057986596,0.0915975934018623,0,0,0,0,0,0,0,0.37950746544837,0,0.843992258112108,2.12202650606892,0,5.62610463329437,0.995261931078505,0.0884575645033392,0,0,0.123563938946503,0.104421949505455,0,0,0,0.364909578431332,0.978323094660449,0.242780379534093,0,0,0,0,0.300646838828985,0.622129148383483,0,0,0,0,0.284609546029793,0.138674673013139,1.90915712168644,1.07791637155815,0.261177619741208,0,0.687944129886466,0.290268993867255,0.292357268344742,0.164230914106418,0,0,0.225980740780532,0,0.397429223405979,0,0.391102765469606,0.0801588202515337,0.213452994739353,0.599428828746391,0.144090417154106,0.114536596165916,0.857974989309823,0.14405479798815,0.124252535565433,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0.315132729228895,0.329663433524666,0.539228350833479,0,1.1007533168552,0,0,59.1571586351271,9.3526816886119,7.47792608452533,0.2249738915515,0,0,0,0,0.104909176269996,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0,0.704815022316672,0,0,0,0,0.395223263795889,0.243585196761792,0.638341257770182,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0.553394539744923,0,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0.521988583930423,0,0,0,0.179088841081487,0.308801447160972,0,0,0,0.168942440653073,0.256241518587947,0,0,0,0.194860308839388,0,0,0.327609848846413,0.491545817507439,0,0.19998739585493,0.320075189082423,0,0,0,0,0,0.127894371303652,0.215649622793364,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0,0.115525666150338,0,0,0,0,0,0,0.523813388962845,0.163771917510097,0.147856086217045,0,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0.606965604236632,0,0,0.115233987555779,0,0,0,0,0.222462803784138,0.078493092850514,0,1.96190514319652,0,0,0,0,3.31828584638726,2.09234565662625,0,0,0,0.3414369541879,0,0,0,0,0,1.14553434272025,0,0,0.447421727191169,0.294450700845729,0.121917924982269,0,0.102662806856247,0,0,0,0,0,0.11294608203896,1.09940516745429,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.128915775947154,0.2998234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| |||
|short_description=p3@NUDT15 | |||
}} |
Revision as of 02:26, 11 September 2013
Short description: | p3@NUDT15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_NUDT15_5end |
Coexpression cluster: | C425_iPS_HES3GFP_H9_teratocarcinoma_testicular_hepatocellular_Wilms |
Association with transcript: | 0bp_to_ENST00000258662, NM_018283, uc001vbv.2, uc001vbw.1_5end |
EntrezGene: | NUDT15 |
HGNC: | 23063 |
UniProt: | Q9NV35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.71e-30 | 5 |
melanocyte | 9.38e-10 | 10 |
melanoblast | 9.38e-10 | 10 |
neuron | 1.15e-09 | 6 |
neuroblast | 1.15e-09 | 6 |
electrically signaling cell | 1.15e-09 | 6 |
germ line cell | 2.46e-08 | 7 |
germ cell | 2.46e-08 | 7 |
neuronal stem cell | 2.36e-07 | 8 |
pigment cell | 5.54e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
testis | 2.42e-07 | 8 |
mammalian vulva | 9.73e-07 | 1 |
external female genitalia | 9.73e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.81e-10 | 106 |
germ cell and embryonal cancer | 5.15e-09 | 22 |
germ cell cancer | 5.15e-09 | 22 |
cancer | 6.92e-08 | 235 |
cell type cancer | 7.48e-08 | 143 |
disease of cellular proliferation | 1.26e-07 | 239 |
anemia | 8.18e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.