FFCP PHASE1:Hg19::chr14:54418733..54418774,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=652|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1071|TSSclassifier=S|UniProt=P12644|association_with_transcript=149bp_to_D30751_5end|description=CAGE_peak_7_at_BMP4_5end|id=chr14:54418733..54418774,-|ontology_enrichment_celltype=CL:0000213!1.68e-09!57;CL:0000215!1.68e-09!57|ontology_enrichment_celltype_v019=CL:0002622;6.62e-19;3!CL:0000511;1.40e-14;1!CL:0002625;1.40e-14;1!CL:0000216;1.40e-14;1|ontology_enrichment_celltype_v019_2=CL:0002622,5.54e-19,3;CL:0000511,1.23e-14,1;CL:0002625,1.23e-14,1;CL:0000216,1.23e-14,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4929;2.38e-27;2!DOID:3119;1.64e-15;14|ontology_enrichment_disease_v019_2=DOID:4929,7.96e-27,2;DOID:3119,1.65e-15,14|ontology_enrichment_uberon=UBERON:0004119!1.91e-08!169;UBERON:0000925!1.91e-08!169;UBERON:0006595!1.91e-08!169;UBERON:0001007!2.29e-08!155;UBERON:0001555!2.29e-08!155;UBERON:0007026!2.29e-08!155|ontology_enrichment_uberon_v019=UBERON:0002114;1.36e-18;2!UBERON:0001136;1.40e-14;1!UBERON:0001343;1.40e-14;1!UBERON:0004913;1.40e-14;1!UBERON:0003703;1.40e-14;1!UBERON:0004910;1.40e-14;1!UBERON:0004813;1.40e-14;1!UBERON:0001174;1.40e-14;1!UBERON:0004914;1.40e-14;1!UBERON:0005409;1.92e-14;22!UBERON:0000160;4.84e-12;17!UBERON:0002108;1.50e-11;4!UBERON:0004921;1.20e-08;33!UBERON:0004909;6.14e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0002114,2.53e-18,2;UBERON:0001136,1.23e-14,1;UBERON:0001343,1.23e-14,1;UBERON:0004910,1.23e-14,1;UBERON:0005154,1.23e-14,1;UBERON:0005295,1.23e-14,1;UBERON:0004813,1.23e-14,1;UBERON:0005297,1.23e-14,1;UBERON:0005294,1.23e-14,1;UBERON:0010141,1.23e-14,1;UBERON:0005891,1.23e-14,1;UBERON:0004913,3.15e-14,1;UBERON:0003703,3.15e-14,1;UBERON:0001174,3.15e-14,1;UBERON:0004914,3.15e-14,1;UBERON:0005409,8.29e-13,25;UBERON:0000160,4.44e-12,17;UBERON:0002108,2.17e-11,4;UBERON:0004122,1.17e-08,15;UBERON:0004909,5.74e-08,2;UBERON:0001046,5.52e-07,19|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0,0,1.73815822752988,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0,0.516833518338658,0,0,0.402829317109147,0,0.24406205754817,0,0.81014194788176,0.535798369704479,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0.265059536642971,0.464775771478074,0,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0.433099343283221,0,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0.381988425558278,0,0,0.205654985406647,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0.483437798366489,0,0,1.7222167224691,0,3.2781103739856,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.656029291399411,0.650756789328606,0,0.183138929636687,0.577566499444116,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0.409499734223957,0.141405431953713,0,0,1.32687795048244,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0,0.422215270595328,0,0,0.349934720244983,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,1.06824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0,0,0,0.449341755736634,0,0,0.197286811273867,0,0,0,0,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.83309043480088,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0.195551382734803,0,0.213452994739353,0,0.576361668616424,2.1761953271524,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0.0674035438541849,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0.628216385000937,0,0.122026264901963,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0.308801447160972,1.09642024789354,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=652 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1071 | |||
|TSSclassifier=S | |||
|UniProt=P12644 | |||
|association_with_transcript=149bp_to_D30751_5end | |||
|description=CAGE_peak_7_at_BMP4_5end | |||
|id=chr14:54418733..54418774,- | |||
|ontology_enrichment_celltype=CL:0000213!1.68e-09!57;CL:0000215!1.68e-09!57 | |||
|ontology_enrichment_celltype_v019=CL:0002622;6.62e-19;3!CL:0000511;1.40e-14;1!CL:0002625;1.40e-14;1!CL:0000216;1.40e-14;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,5.54e-19,3;CL:0000511,1.23e-14,1;CL:0002625,1.23e-14,1;CL:0000216,1.23e-14,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4929;2.38e-27;2!DOID:3119;1.64e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,7.96e-27,2;DOID:3119,1.65e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.91e-08!169;UBERON:0000925!1.91e-08!169;UBERON:0006595!1.91e-08!169;UBERON:0001007!2.29e-08!155;UBERON:0001555!2.29e-08!155;UBERON:0007026!2.29e-08!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002114;1.36e-18;2!UBERON:0001136;1.40e-14;1!UBERON:0001343;1.40e-14;1!UBERON:0004913;1.40e-14;1!UBERON:0003703;1.40e-14;1!UBERON:0004910;1.40e-14;1!UBERON:0004813;1.40e-14;1!UBERON:0001174;1.40e-14;1!UBERON:0004914;1.40e-14;1!UBERON:0005409;1.92e-14;22!UBERON:0000160;4.84e-12;17!UBERON:0002108;1.50e-11;4!UBERON:0004921;1.20e-08;33!UBERON:0004909;6.14e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002114,2.53e-18,2;UBERON:0001136,1.23e-14,1;UBERON:0001343,1.23e-14,1;UBERON:0004910,1.23e-14,1;UBERON:0005154,1.23e-14,1;UBERON:0005295,1.23e-14,1;UBERON:0004813,1.23e-14,1;UBERON:0005297,1.23e-14,1;UBERON:0005294,1.23e-14,1;UBERON:0010141,1.23e-14,1;UBERON:0005891,1.23e-14,1;UBERON:0004913,3.15e-14,1;UBERON:0003703,3.15e-14,1;UBERON:0001174,3.15e-14,1;UBERON:0004914,3.15e-14,1;UBERON:0005409,8.29e-13,25;UBERON:0000160,4.44e-12,17;UBERON:0002108,2.17e-11,4;UBERON:0004122,1.17e-08,15;UBERON:0004909,5.74e-08,2;UBERON:0001046,5.52e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0,0,1.73815822752988,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0,0.516833518338658,0,0,0.402829317109147,0,0.24406205754817,0,0.81014194788176,0.535798369704479,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0.265059536642971,0.464775771478074,0,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0.433099343283221,0,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0.381988425558278,0,0,0.205654985406647,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0.483437798366489,0,0,1.7222167224691,0,3.2781103739856,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.656029291399411,0.650756789328606,0,0.183138929636687,0.577566499444116,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0.409499734223957,0.141405431953713,0,0,1.32687795048244,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0,0.422215270595328,0,0,0.349934720244983,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,1.06824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0,0,0,0.449341755736634,0,0,0.197286811273867,0,0,0,0,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.83309043480088,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0.195551382734803,0,0.213452994739353,0,0.576361668616424,2.1761953271524,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0.0674035438541849,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0.628216385000937,0,0.122026264901963,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0.308801447160972,1.09642024789354,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0.397832444232549,0,0,0,0,0,1.03499260351932,0.0675375846183947,0,0,0.0634158101939068,0,0.548257766857182,0.496211178389294,0,0.255524855279191,0,0,0,0.227662191351298,0.354809480650555,0,0,0,0,0,0,0.470958557103084,0,1.96190514319652,0,0,0,0.214429632529969,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0.98150233615243,0,0,0,0,0,0,1.59160620129095,0,0.45178432815584,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0.315543124386369,0,0,1.5870805215462,0,0.924351257262837,0,0.126166424835079,0,1.90047751517155,0.305966489225945,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0.224263725161227,0.0636471582781649,0,0,0.342233301085281,0,0.143444410785353,0.332660356546013,0,0.106727345877715,0,1.25755282949222,0,0,0,0,0,0 | |||
|short_description=p7@BMP4 | |||
}} |
Revision as of 04:47, 11 September 2013
Short description: | p7@BMP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_BMP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 149bp_to_D30751_5end |
EntrezGene: | BMP4 |
HGNC: | 1071 |
UniProt: | P12644 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 5.54e-19 | 3 |
androgen binding protein secreting cell | 1.23e-14 | 1 |
seminiferous tubule epithelial cell | 1.23e-14 | 1 |
Sertoli cell | 1.23e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
duodenum | 2.53e-18 | 2 |
mesothelium | 1.23e-14 | 1 |
seminiferous tubule of testis | 1.23e-14 | 1 |
epithelium of male gonad | 1.23e-14 | 1 |
epithelial cord | 1.23e-14 | 1 |
sex cord | 1.23e-14 | 1 |
seminiferous tubule epithelium | 1.23e-14 | 1 |
testis sex cord | 1.23e-14 | 1 |
genital ridge | 1.23e-14 | 1 |
primitive sex cord of indifferent gonad | 1.23e-14 | 1 |
coelomic epithelium | 1.23e-14 | 1 |
hepatopancreatic ampulla | 3.15e-14 | 1 |
extrahepatic bile duct | 3.15e-14 | 1 |
common bile duct | 3.15e-14 | 1 |
duodenal papilla | 3.15e-14 | 1 |
gastrointestinal system | 8.29e-13 | 25 |
intestine | 4.44e-12 | 17 |
small intestine | 2.17e-11 | 4 |
genitourinary system | 1.17e-08 | 15 |
epithelium of gonad | 5.74e-08 | 2 |
hindgut | 5.52e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 7.96e-27 | 2 |
gastrointestinal system cancer | 1.65e-15 | 14 |
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