FFCP PHASE1:Hg19::chr14:92403405..92403440,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C470|description=CAGE_peak_at_chr14:92403405..92403440,-|id=chr14:92403405..92403440,-|ontology_enrichment_celltype=CL:0000057!8.54e-27!75;CL:0000055!2.24e-26!180;CL:0002620!2.85e-13!23;CL:0000680!5.03e-10!57;CL:0000056!5.03e-10!57;CL:0000355!5.03e-10!57;CL:0000183!1.31e-09!59;CL:0000187!1.48e-09!54;CL:0000136!5.57e-09!15;CL:0002334!5.87e-09!12;CL:0000192!9.07e-08!42;CL:0000514!9.07e-08!42;CL:0000393!2.57e-07!60;CL:0000211!2.57e-07!60|ontology_enrichment_celltype_v019=CL:0002620;9.56e-20;23!CL:0000057;4.72e-12;73!CL:0002334;2.56e-10;12!CL:0000136;3.94e-08;13!CL:0002551;6.92e-08;6|ontology_enrichment_celltype_v019_2=CL:0000057,3.38e-29,76;CL:0002620,1.58e-19,23;CL:0002334,3.33e-10,12;CL:0000136,4.97e-10,15;CL:0000048,4.70e-08,427;CL:0002551,8.97e-08,6;CL:0000723,1.40e-07,433;CL:0000034,5.57e-07,441|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;6.98e-07;5!DOID:450;6.98e-07;5!DOID:66;6.98e-07;5!DOID:423;6.98e-07;5!DOID:0080000;6.98e-07;5!DOID:11722;6.98e-07;5|ontology_enrichment_disease_v019_2=DOID:17,8.65e-07,5;DOID:450,8.65e-07,5;DOID:66,8.65e-07,5;DOID:423,8.65e-07,5;DOID:0080000,8.65e-07,5;DOID:11722,8.65e-07,5|ontology_enrichment_uberon=UBERON:0000475!4.78e-18!365;UBERON:0003102!1.02e-16!95;UBERON:0000914!3.57e-16!83;UBERON:0002329!3.57e-16!83;UBERON:0003077!3.57e-16!83;UBERON:0003059!3.57e-16!83;UBERON:0007282!3.57e-16!83;UBERON:0009618!3.57e-16!83;UBERON:0007285!3.57e-16!83;UBERON:0004290!4.69e-14!70;UBERON:0002199!1.72e-13!45;UBERON:0002416!1.72e-13!45;UBERON:0005256!1.54e-11!143;UBERON:0000486!3.77e-11!82;UBERON:0002385!4.75e-11!63;UBERON:0001015!4.75e-11!63;UBERON:0000383!4.75e-11!63;UBERON:0002100!8.57e-11!216;UBERON:0002097!1.16e-10!40;UBERON:0001134!1.73e-10!61;UBERON:0002036!1.73e-10!61;UBERON:0003082!1.73e-10!61;UBERON:0000481!1.38e-09!347;UBERON:0000468!3.52e-09!659;UBERON:0001013!5.35e-08!14;UBERON:0007023!1.50e-07!115;UBERON:0000467!4.12e-07!625;UBERON:0000479!5.13e-07!787;UBERON:0000480!5.38e-07!626|ontology_enrichment_uberon_v019=UBERON:0002199;2.53e-13;46!UBERON:0002416;2.53e-13;46!UBERON:0002097;4.43e-12;41!UBERON:0003102;1.68e-11;50!UBERON:0001013;1.20e-10;14!UBERON:0003688;1.17e-09;6!UBERON:0002358;1.17e-09;6!UBERON:0003684;1.17e-09;6!UBERON:0001178;1.17e-09;6!UBERON:0004457;2.22e-09;9!UBERON:0000042;2.22e-09;9!UBERON:0002067;1.88e-08;9|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.02e-21,99;UBERON:0002199,7.98e-21,46;UBERON:0002416,7.98e-21,46;UBERON:0002097,2.65e-16,41;UBERON:0002100,1.55e-11,199;UBERON:0007524,3.76e-11,73;UBERON:0005256,5.18e-11,122;UBERON:0002329,9.46e-11,71;UBERON:0003059,9.46e-11,71;UBERON:0007282,9.46e-11,71;UBERON:0004290,9.46e-11,71;UBERON:0009618,9.46e-11,71;UBERON:0001013,9.50e-11,14;UBERON:0003077,1.82e-10,72;UBERON:0007285,1.82e-10,72;UBERON:0004457,5.12e-10,12;UBERON:0000042,5.12e-10,12;UBERON:0003688,1.22e-09,6;UBERON:0002358,1.22e-09,6;UBERON:0003684,1.22e-09,6;UBERON:0001178,1.22e-09,6;UBERON:0000486,3.66e-09,83;UBERON:0007503,6.23e-09,78;UBERON:0002067,1.95e-08,9;UBERON:0004016,1.95e-08,9;UBERON:0010083,1.95e-08,9;UBERON:0003104,3.06e-08,160;UBERON:0009142,3.06e-08,160;UBERON:0004923,5.54e-08,66;UBERON:0002072,8.98e-07,5|phase1_expression=23.2548325466312,24.835660771354,22.8346134635473,15.0109947529696,34.4160042709012,30.5318483435129,15.1979926900986,3.15859936713415,1.82829939739887,0,0,0,0,0.37129905888014,0.331397375727916,0.672325146451775,1.20538905604795,0.730310090387373,1.95173119516203,0.123121058076788,0.204000691244253,0.940364164434263,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.255725123687061,0.361439152384566,0.50133791063589,1.15877215168659,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.087834785693126,1.44076983047484,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,1.98788780678127,1.77282716330412,0.264818361626438,10.8997915884549,0.354668382198357,1.68203280042692,0,0.24666754841716,0.311211035399766,0.538842688278752,0.163461903113459,1.21085942115945,2.88087962239999,0.468642863667593,2.49728061464256,2.2818872861778,3.28787097213962,2.23125547423153,3.56120477609889,3.51127016755621,0.816616685019573,0.737005903870608,1.03325781175765,4.75201142912821,8.15980866619238,0.910161361938026,1.43723628363248,1.17835279767846,2.37725187756732,1.38532057742091,0.877955241761676,2.75839016219118,2.10333282469236,0.226864366320042,2.15267562826634,2.34913127700424,2.54318281391474,6.90209520994125,3.40073346486848,3.86460810068444,2.60563598864226,1.5189869901714,3.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C470 | |||
|description=CAGE_peak_at_chr14:92403405..92403440,- | |||
|id=chr14:92403405..92403440,- | |||
|ontology_enrichment_celltype=CL:0000057!8.54e-27!75;CL:0000055!2.24e-26!180;CL:0002620!2.85e-13!23;CL:0000680!5.03e-10!57;CL:0000056!5.03e-10!57;CL:0000355!5.03e-10!57;CL:0000183!1.31e-09!59;CL:0000187!1.48e-09!54;CL:0000136!5.57e-09!15;CL:0002334!5.87e-09!12;CL:0000192!9.07e-08!42;CL:0000514!9.07e-08!42;CL:0000393!2.57e-07!60;CL:0000211!2.57e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002620;9.56e-20;23!CL:0000057;4.72e-12;73!CL:0002334;2.56e-10;12!CL:0000136;3.94e-08;13!CL:0002551;6.92e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.38e-29,76;CL:0002620,1.58e-19,23;CL:0002334,3.33e-10,12;CL:0000136,4.97e-10,15;CL:0000048,4.70e-08,427;CL:0002551,8.97e-08,6;CL:0000723,1.40e-07,433;CL:0000034,5.57e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;6.98e-07;5!DOID:450;6.98e-07;5!DOID:66;6.98e-07;5!DOID:423;6.98e-07;5!DOID:0080000;6.98e-07;5!DOID:11722;6.98e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.65e-07,5;DOID:450,8.65e-07,5;DOID:66,8.65e-07,5;DOID:423,8.65e-07,5;DOID:0080000,8.65e-07,5;DOID:11722,8.65e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!4.78e-18!365;UBERON:0003102!1.02e-16!95;UBERON:0000914!3.57e-16!83;UBERON:0002329!3.57e-16!83;UBERON:0003077!3.57e-16!83;UBERON:0003059!3.57e-16!83;UBERON:0007282!3.57e-16!83;UBERON:0009618!3.57e-16!83;UBERON:0007285!3.57e-16!83;UBERON:0004290!4.69e-14!70;UBERON:0002199!1.72e-13!45;UBERON:0002416!1.72e-13!45;UBERON:0005256!1.54e-11!143;UBERON:0000486!3.77e-11!82;UBERON:0002385!4.75e-11!63;UBERON:0001015!4.75e-11!63;UBERON:0000383!4.75e-11!63;UBERON:0002100!8.57e-11!216;UBERON:0002097!1.16e-10!40;UBERON:0001134!1.73e-10!61;UBERON:0002036!1.73e-10!61;UBERON:0003082!1.73e-10!61;UBERON:0000481!1.38e-09!347;UBERON:0000468!3.52e-09!659;UBERON:0001013!5.35e-08!14;UBERON:0007023!1.50e-07!115;UBERON:0000467!4.12e-07!625;UBERON:0000479!5.13e-07!787;UBERON:0000480!5.38e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;2.53e-13;46!UBERON:0002416;2.53e-13;46!UBERON:0002097;4.43e-12;41!UBERON:0003102;1.68e-11;50!UBERON:0001013;1.20e-10;14!UBERON:0003688;1.17e-09;6!UBERON:0002358;1.17e-09;6!UBERON:0003684;1.17e-09;6!UBERON:0001178;1.17e-09;6!UBERON:0004457;2.22e-09;9!UBERON:0000042;2.22e-09;9!UBERON:0002067;1.88e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.02e-21,99;UBERON:0002199,7.98e-21,46;UBERON:0002416,7.98e-21,46;UBERON:0002097,2.65e-16,41;UBERON:0002100,1.55e-11,199;UBERON:0007524,3.76e-11,73;UBERON:0005256,5.18e-11,122;UBERON:0002329,9.46e-11,71;UBERON:0003059,9.46e-11,71;UBERON:0007282,9.46e-11,71;UBERON:0004290,9.46e-11,71;UBERON:0009618,9.46e-11,71;UBERON:0001013,9.50e-11,14;UBERON:0003077,1.82e-10,72;UBERON:0007285,1.82e-10,72;UBERON:0004457,5.12e-10,12;UBERON:0000042,5.12e-10,12;UBERON:0003688,1.22e-09,6;UBERON:0002358,1.22e-09,6;UBERON:0003684,1.22e-09,6;UBERON:0001178,1.22e-09,6;UBERON:0000486,3.66e-09,83;UBERON:0007503,6.23e-09,78;UBERON:0002067,1.95e-08,9;UBERON:0004016,1.95e-08,9;UBERON:0010083,1.95e-08,9;UBERON:0003104,3.06e-08,160;UBERON:0009142,3.06e-08,160;UBERON:0004923,5.54e-08,66;UBERON:0002072,8.98e-07,5 | |||
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| |||
|short_description=p@chr14:92403405..92403440,- | |||
}} |
Revision as of 05:59, 11 September 2013
Short description: | p@chr14:92403405..92403440, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:92403405..92403440, - |
Coexpression cluster: | C470_Adipocyte_Preadipocyte_Smooth_Fibroblast_aorta_normal_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.38e-29 | 76 |
skin fibroblast | 1.58e-19 | 23 |
preadipocyte | 3.33e-10 | 12 |
fat cell | 4.97e-10 | 15 |
multi fate stem cell | 4.70e-08 | 427 |
fibroblast of dermis | 8.97e-08 | 6 |
somatic stem cell | 1.40e-07 | 433 |
stem cell | 5.57e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.02e-21 | 99 |
integument | 7.98e-21 | 46 |
integumental system | 7.98e-21 | 46 |
skin of body | 2.65e-16 | 41 |
trunk | 1.55e-11 | 199 |
dense mesenchyme tissue | 3.76e-11 | 73 |
trunk mesenchyme | 5.18e-11 | 122 |
somite | 9.46e-11 | 71 |
presomitic mesoderm | 9.46e-11 | 71 |
presumptive segmental plate | 9.46e-11 | 71 |
dermomyotome | 9.46e-11 | 71 |
trunk paraxial mesoderm | 9.46e-11 | 71 |
adipose tissue | 9.50e-11 | 14 |
paraxial mesoderm | 1.82e-10 | 72 |
presumptive paraxial mesoderm | 1.82e-10 | 72 |
cavity lining | 5.12e-10 | 12 |
serous membrane | 5.12e-10 | 12 |
omentum | 1.22e-09 | 6 |
peritoneum | 1.22e-09 | 6 |
abdominal cavity | 1.22e-09 | 6 |
visceral peritoneum | 1.22e-09 | 6 |
multilaminar epithelium | 3.66e-09 | 83 |
epithelial vesicle | 6.23e-09 | 78 |
dermis | 1.95e-08 | 9 |
dermatome | 1.95e-08 | 9 |
future dermis | 1.95e-08 | 9 |
mesenchyme | 3.06e-08 | 160 |
entire embryonic mesenchyme | 3.06e-08 | 160 |
organ component layer | 5.54e-08 | 66 |
hypodermis | 8.98e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.65e-07 | 5 |
myotonic disease | 8.65e-07 | 5 |
muscle tissue disease | 8.65e-07 | 5 |
myopathy | 8.65e-07 | 5 |
muscular disease | 8.65e-07 | 5 |
myotonic dystrophy | 8.65e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.