FFCP PHASE1:Hg19::chr15:90349536..90349548,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=271bp_to_AB462940_5end|coexpression_cluster_id=C25|description=CAGE_peak_5_at_AB462940_5end|id=chr15:90349536..90349548,-|ontology_enrichment_celltype=CL:0000048!5.75e-26!430;CL:0000723!9.78e-25!436;CL:0000034!1.37e-23!444;CL:0002320!2.74e-19!365;CL:0000134!1.62e-17!358;CL:0002371!4.32e-17!591;CL:0000055!1.56e-14!180;CL:0000057!6.96e-14!75;CL:0000219!8.06e-14!390;CL:0000144!3.61e-13!625;CL:0000766!3.32e-10!76;CL:0002194!3.55e-09!63;CL:0000576!3.55e-09!63;CL:0000040!3.55e-09!63;CL:0000559!3.55e-09!63;CL:0000680!1.07e-08!57;CL:0000056!1.07e-08!57;CL:0000355!1.07e-08!57;CL:0002009!1.54e-08!65;CL:0000183!1.61e-08!59;CL:0002057!2.83e-08!42;CL:0000839!4.02e-08!70;CL:0000557!7.60e-08!71;CL:0002620!1.30e-07!23;CL:0000187!2.13e-07!54;CL:0000548!2.41e-07!679;CL:0000004!2.41e-07!679;CL:0000255!2.41e-07!679;CL:0000860!3.74e-07!45;CL:0000012!4.80e-07!682|ontology_enrichment_celltype_v019=CL:0000346;5.65e-09;3!CL:1000428;5.65e-09;3!CL:0002559;1.19e-08;5!CL:0000775;2.55e-08;3!CL:0002582;4.46e-08;3!CL:0000860;9.66e-08;33!CL:0002057;9.66e-08;33|ontology_enrichment_celltype_v019_2=CL:0000346,6.03e-09,3;CL:1000428,6.03e-09,3;CL:0000048,9.21e-09,427;CL:0002559,1.11e-08,5;CL:0000775,1.74e-08,3;CL:0000723,1.99e-08,433;CL:0000034,5.37e-08,441;CL:0002582,6.96e-08,3;CL:0000766,8.80e-08,72|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!3.80e-20!375;UBERON:0002204!3.42e-16!167;UBERON:0004290!2.38e-12!70;UBERON:0000914!1.55e-11!83;UBERON:0002329!1.55e-11!83;UBERON:0003077!1.55e-11!83;UBERON:0003059!1.55e-11!83;UBERON:0007282!1.55e-11!83;UBERON:0009618!1.55e-11!83;UBERON:0007285!1.55e-11!83;UBERON:0000926!1.57e-11!448;UBERON:0004120!1.57e-11!448;UBERON:0006603!1.57e-11!448;UBERON:0000486!1.71e-09!82;UBERON:0003081!2.60e-09!216;UBERON:0002371!7.72e-09!80;UBERON:0002405!2.12e-08!115;UBERON:0005256!2.25e-08!143;UBERON:0002385!3.83e-08!63;UBERON:0001015!3.83e-08!63;UBERON:0000383!3.83e-08!63;UBERON:0002067!5.90e-08!9;UBERON:0004016!5.90e-08!9;UBERON:0010083!5.90e-08!9;UBERON:0001134!6.94e-08!61;UBERON:0002036!6.94e-08!61;UBERON:0003082!6.94e-08!61;UBERON:0004765!1.42e-07!101;UBERON:0001434!1.42e-07!101;UBERON:0000479!1.93e-07!787;UBERON:0001474!2.49e-07!86;UBERON:0002199!3.22e-07!45;UBERON:0002416!3.22e-07!45;UBERON:0001981!4.51e-07!60;UBERON:0007500!4.51e-07!60;UBERON:0004537!4.51e-07!60;UBERON:0006965!4.51e-07!60|ontology_enrichment_uberon_v019=UBERON:0002067;6.14e-10;9!UBERON:0000412;5.65e-09;3!UBERON:0001992;5.65e-09;3!UBERON:0002073;1.19e-08;5!UBERON:0002072;3.05e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0002067,6.54e-10,9;UBERON:0004016,6.54e-10,9;UBERON:0010083,6.54e-10,9;UBERON:0000412,6.03e-09,3;UBERON:0001992,6.03e-09,3;UBERON:0002073,1.11e-08,5;UBERON:0005086,1.11e-08,5;UBERON:0002072,1.58e-08,5;UBERON:0000926,3.17e-08,315;UBERON:0004120,3.17e-08,315;UBERON:0006603,3.17e-08,315;UBERON:0005256,4.63e-08,122;UBERON:0007503,2.89e-07,78;UBERON:0002204,3.92e-07,167;UBERON:0002384,6.37e-07,371|phase1_expression=0.908391896352783,0.428201047781966,0.281908808191942,1.0007329835313,0,0,0,3.15859936713415,1.56711376919903,0,0,0,0.263766978228454,0.247532705920093,0.994192127183747,0.672325146451775,3.01347264011988,0,0,0.492484232307152,0.204000691244253,0,0,0.410623275218653,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0.553995408531877,0,0,1.34349284543955,0,0.77272670290256,2.03557534291391,0.755751887377619,0,1.16214518452842,0.822335776043652,0.619412741790207,1.1507695692886,0.512321413058201,0.47296445977717,0.344745680736619,0,0,2.82363509313907,1.09162460023138,1.12361742222542,0.306083892370903,0.641858054152187,2.55734850319616,1.64925650093358,1.59570926097305,0.426224750532694,2.32167390902867,1.13477044938228,0,1.00499466102697,0.521482918420201,0.434377689410233,1.81619850790011,0.368277635987565,0,0.211255286311942,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.579386075843295,0.795285947051099,0.486634870302636,0,0,0,0.851363990735132,0,0,0.324547393654683,0.696518949197069,1.32957960518865,0,0,0,0,0,0.347140501607594,0,0,0.550236083880135,0,0.258416759169329,0,0,0.402829317109147,0.760272105718513,0.976248230192678,0.735326160691737,1.62028389576352,0.446498641420399,0.22452937262617,0,0,0.949265659568129,0,1.31780417436063,0,0,0.496971951695318,0.25326102332916,0.132409180813219,2.29469296599051,1.06400514659507,0.560677600142307,0,0,0.622422070799533,0.404132016209064,0,0.756787138224657,0.576175924479999,0,2.80944069147288,1.1409436430889,2.39117888882882,0.469737994575059,0.647491777472526,0.280901613404497,0.61246251376468,0.122834317311768,0.929932030581889,1.18800285728205,0.741800787835671,0,1.43723628363248,0.16833611395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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=271bp_to_AB462940_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_5_at_AB462940_5end | |||
|id=chr15:90349536..90349548,- | |||
|ontology_enrichment_celltype=CL:0000048!5.75e-26!430;CL:0000723!9.78e-25!436;CL:0000034!1.37e-23!444;CL:0002320!2.74e-19!365;CL:0000134!1.62e-17!358;CL:0002371!4.32e-17!591;CL:0000055!1.56e-14!180;CL:0000057!6.96e-14!75;CL:0000219!8.06e-14!390;CL:0000144!3.61e-13!625;CL:0000766!3.32e-10!76;CL:0002194!3.55e-09!63;CL:0000576!3.55e-09!63;CL:0000040!3.55e-09!63;CL:0000559!3.55e-09!63;CL:0000680!1.07e-08!57;CL:0000056!1.07e-08!57;CL:0000355!1.07e-08!57;CL:0002009!1.54e-08!65;CL:0000183!1.61e-08!59;CL:0002057!2.83e-08!42;CL:0000839!4.02e-08!70;CL:0000557!7.60e-08!71;CL:0002620!1.30e-07!23;CL:0000187!2.13e-07!54;CL:0000548!2.41e-07!679;CL:0000004!2.41e-07!679;CL:0000255!2.41e-07!679;CL:0000860!3.74e-07!45;CL:0000012!4.80e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000346;5.65e-09;3!CL:1000428;5.65e-09;3!CL:0002559;1.19e-08;5!CL:0000775;2.55e-08;3!CL:0002582;4.46e-08;3!CL:0000860;9.66e-08;33!CL:0002057;9.66e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,6.03e-09,3;CL:1000428,6.03e-09,3;CL:0000048,9.21e-09,427;CL:0002559,1.11e-08,5;CL:0000775,1.74e-08,3;CL:0000723,1.99e-08,433;CL:0000034,5.37e-08,441;CL:0002582,6.96e-08,3;CL:0000766,8.80e-08,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.80e-20!375;UBERON:0002204!3.42e-16!167;UBERON:0004290!2.38e-12!70;UBERON:0000914!1.55e-11!83;UBERON:0002329!1.55e-11!83;UBERON:0003077!1.55e-11!83;UBERON:0003059!1.55e-11!83;UBERON:0007282!1.55e-11!83;UBERON:0009618!1.55e-11!83;UBERON:0007285!1.55e-11!83;UBERON:0000926!1.57e-11!448;UBERON:0004120!1.57e-11!448;UBERON:0006603!1.57e-11!448;UBERON:0000486!1.71e-09!82;UBERON:0003081!2.60e-09!216;UBERON:0002371!7.72e-09!80;UBERON:0002405!2.12e-08!115;UBERON:0005256!2.25e-08!143;UBERON:0002385!3.83e-08!63;UBERON:0001015!3.83e-08!63;UBERON:0000383!3.83e-08!63;UBERON:0002067!5.90e-08!9;UBERON:0004016!5.90e-08!9;UBERON:0010083!5.90e-08!9;UBERON:0001134!6.94e-08!61;UBERON:0002036!6.94e-08!61;UBERON:0003082!6.94e-08!61;UBERON:0004765!1.42e-07!101;UBERON:0001434!1.42e-07!101;UBERON:0000479!1.93e-07!787;UBERON:0001474!2.49e-07!86;UBERON:0002199!3.22e-07!45;UBERON:0002416!3.22e-07!45;UBERON:0001981!4.51e-07!60;UBERON:0007500!4.51e-07!60;UBERON:0004537!4.51e-07!60;UBERON:0006965!4.51e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;6.14e-10;9!UBERON:0000412;5.65e-09;3!UBERON:0001992;5.65e-09;3!UBERON:0002073;1.19e-08;5!UBERON:0002072;3.05e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,6.54e-10,9;UBERON:0004016,6.54e-10,9;UBERON:0010083,6.54e-10,9;UBERON:0000412,6.03e-09,3;UBERON:0001992,6.03e-09,3;UBERON:0002073,1.11e-08,5;UBERON:0005086,1.11e-08,5;UBERON:0002072,1.58e-08,5;UBERON:0000926,3.17e-08,315;UBERON:0004120,3.17e-08,315;UBERON:0006603,3.17e-08,315;UBERON:0005256,4.63e-08,122;UBERON:0007503,2.89e-07,78;UBERON:0002204,3.92e-07,167;UBERON:0002384,6.37e-07,371 | |||
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| |||
|short_description=p5@AB462940 | |||
}} |
Revision as of 08:49, 11 September 2013
Short description: | p5@AB462940 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_AB462940_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 271bp_to_AB462940_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 6.03e-09 | 3 |
stem cell of epidermis | 6.03e-09 | 3 |
multi fate stem cell | 9.21e-09 | 427 |
hair follicle cell | 1.11e-08 | 5 |
neutrophil | 1.74e-08 | 3 |
somatic stem cell | 1.99e-08 | 433 |
stem cell | 5.37e-08 | 441 |
visceral preadipocyte | 6.96e-08 | 3 |
myeloid leukocyte | 8.80e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
dermis | 6.54e-10 | 9 |
dermatome | 6.54e-10 | 9 |
future dermis | 6.54e-10 | 9 |
dermal papilla | 6.03e-09 | 3 |
papillary layer of dermis | 6.03e-09 | 3 |
hair follicle | 1.11e-08 | 5 |
hair follicle placode | 1.11e-08 | 5 |
hypodermis | 1.58e-08 | 5 |
mesoderm | 3.17e-08 | 315 |
mesoderm-derived structure | 3.17e-08 | 315 |
presumptive mesoderm | 3.17e-08 | 315 |
trunk mesenchyme | 4.63e-08 | 122 |
epithelial vesicle | 2.89e-07 | 78 |
musculoskeletal system | 3.92e-07 | 167 |
connective tissue | 6.37e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.