FFCP PHASE1:Hg19::chr16:82068873..82068889,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3294|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5211|TSSclassifier=S|UniProt=P37059|association_with_transcript=7bp_to_ENST00000199936_5end|coexpression_cluster_id=C1223|description=CAGE_peak_3_at_HSD17B2_5end|id=chr16:82068873..82068889,+|ontology_enrichment_celltype=CL:0000066!4.71e-17!254;CL:0000220!9.15e-14!246;CL:0002321!2.02e-13!248;CL:0000223!4.89e-12!59;CL:0002139!1.29e-08!24;CL:0000115!1.56e-08!35;CL:0000181!4.65e-08!12;CL:0000417!4.65e-08!12;CL:0000668!4.65e-08!12;CL:0000414!4.65e-08!12;CL:0000412!4.65e-08!12;CL:0000182!4.65e-08!12;CL:0005020!1.34e-07!6;CL:0002138!1.34e-07!6;CL:0005022!1.34e-07!6;CL:0002076!3.49e-07!43|ontology_enrichment_celltype_v019=CL:0000182;2.40e-12;12!CL:0002138;5.09e-11;6!CL:0002139;4.37e-09;24!CL:0000115;1.87e-08;36!CL:0002586;8.96e-07;3|ontology_enrichment_celltype_v019_2=CL:0000066,1.61e-16,253;CL:0000223,4.54e-15,58;CL:0000182,2.64e-12,12;CL:0002321,7.07e-12,250;CL:0005020,5.16e-11,6;CL:0002138,5.16e-11,6;CL:0005022,5.16e-11,6;CL:0000115,1.78e-10,36;CL:0002139,4.20e-09,24;CL:0002078,2.04e-07,45;CL:0002076,2.45e-07,42;CL:0002586,8.99e-07,3|ontology_enrichment_development_v019=CL:0005022;5.09e-11;6!UBERON:0004161;5.18e-11;11!UBERON:0009497;5.41e-09;13!CL:0000223;8.23e-09;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!8.36e-18!169;UBERON:0000925!8.36e-18!169;UBERON:0006595!8.36e-18!169;UBERON:0003929!7.88e-16!54;UBERON:0001007!2.26e-15!155;UBERON:0001555!2.26e-15!155;UBERON:0007026!2.26e-15!155;UBERON:0004921!1.28e-14!129;UBERON:0004185!1.28e-14!129;UBERON:0005911!6.75e-12!82;UBERON:0002530!7.27e-12!59;UBERON:0002365!8.64e-12!31;UBERON:0002330!8.64e-12!31;UBERON:0000490!2.06e-11!138;UBERON:0000481!2.44e-11!347;UBERON:0009497!1.76e-10!25;UBERON:0000015!1.76e-10!25;UBERON:0002423!1.76e-10!25;UBERON:0006235!1.76e-10!25;UBERON:0004161!1.76e-10!25;UBERON:0009854!1.90e-10!23;UBERON:0007625!2.71e-10!11;UBERON:0008835!5.25e-10!22;UBERON:0003894!5.25e-10!22;UBERON:0000970!6.18e-10!20;UBERON:0000077!9.29e-10!130;UBERON:0000019!3.06e-09!19;UBERON:0000047!3.06e-09!19;UBERON:0004088!3.06e-09!19;UBERON:0003072!3.06e-09!19;UBERON:0003071!3.06e-09!19;UBERON:0004128!3.06e-09!19;UBERON:0002104!3.29e-09!21;UBERON:0000020!5.79e-09!23;UBERON:0002107!9.16e-09!19;UBERON:0006925!9.16e-09!19;UBERON:0008836!9.16e-09!19;UBERON:0009856!1.47e-08!26;UBERON:0000160!1.48e-08!27;UBERON:0001046!1.57e-08!19;UBERON:0001032!2.30e-08!24;UBERON:0004456!2.30e-08!24;UBERON:0001444!2.71e-08!48;UBERON:0000161!3.12e-08!35;UBERON:0007499!3.90e-08!25;UBERON:0005409!5.68e-08!35;UBERON:0001456!6.69e-08!21;UBERON:0005085!1.63e-07!29;UBERON:0000162!1.70e-07!14;UBERON:0001353!1.70e-07!14;UBERON:0000163!1.70e-07!14;UBERON:0006866!1.70e-07!14;UBERON:0000164!1.70e-07!14;UBERON:0000931!1.70e-07!14;UBERON:0003104!2.52e-07!238;UBERON:0009142!2.52e-07!238;UBERON:0000059!6.53e-07!11;UBERON:0004122!8.98e-07!15|ontology_enrichment_uberon_v019=UBERON:0007625;1.40e-15;11!UBERON:0000970;2.24e-14;20!UBERON:0002107;3.97e-14;19!UBERON:0006925;3.97e-14;19!UBERON:0002104;1.72e-13;21!UBERON:0000019;2.68e-13;19!UBERON:0000047;2.68e-13;19!UBERON:0004088;2.68e-13;19!UBERON:0010230;2.68e-13;19!UBERON:0002423;5.26e-13;25!UBERON:0002365;2.82e-12;31!UBERON:0002330;2.82e-12;31!UBERON:0000020;5.83e-12;23!UBERON:0001456;1.14e-11;21!UBERON:0001032;2.71e-11;24!UBERON:0004456;2.71e-11;24!UBERON:0000160;1.85e-10;17!UBERON:0001801;1.16e-08;14!UBERON:0001473;5.54e-08;8!UBERON:0004536;5.54e-08;8!UBERON:0006558;5.54e-08;8!UBERON:0000488;7.48e-08;4!UBERON:0005409;1.54e-07;22!UBERON:0003350;4.23e-07;8!UBERON:0002368;4.28e-07;33!UBERON:0002530;6.10e-07;57!UBERON:0001781;8.96e-07;3!UBERON:0001782;8.96e-07;3!UBERON:0004921;9.22e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.45e-15,11;UBERON:0003929,2.79e-15,54;UBERON:0002107,4.69e-14,19;UBERON:0006925,4.69e-14,19;UBERON:0008836,4.69e-14,19;UBERON:0000970,1.80e-13,21;UBERON:0002104,1.80e-13,21;UBERON:0008835,2.86e-13,22;UBERON:0003894,2.86e-13,22;UBERON:0009497,5.91e-13,25;UBERON:0000015,5.91e-13,25;UBERON:0002423,5.91e-13,25;UBERON:0006235,5.91e-13,25;UBERON:0004161,5.91e-13,25;UBERON:0002365,1.37e-12,31;UBERON:0002330,1.37e-12,31;UBERON:0009854,1.65e-12,23;UBERON:0000019,2.02e-12,20;UBERON:0000047,2.02e-12,20;UBERON:0010312,2.02e-12,20;UBERON:0004088,2.02e-12,20;UBERON:0010230,2.02e-12,20;UBERON:0003072,2.02e-12,20;UBERON:0004128,2.02e-12,20;UBERON:0003071,2.02e-12,20;UBERON:0004921,1.94e-11,118;UBERON:0000020,2.82e-11,24;UBERON:0001032,2.82e-11,24;UBERON:0004456,2.82e-11,24;UBERON:0007499,3.55e-11,25;UBERON:0004119,4.43e-11,160;UBERON:0000925,4.43e-11,160;UBERON:0006595,4.43e-11,160;UBERON:0001456,5.97e-11,22;UBERON:0001007,1.23e-10,145;UBERON:0001555,1.23e-10,145;UBERON:0007026,1.23e-10,145;UBERON:0009856,1.37e-10,26;UBERON:0000160,1.84e-10,17;UBERON:0002530,8.51e-10,59;UBERON:0005911,9.43e-10,82;UBERON:0000490,8.50e-09,148;UBERON:00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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3294 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5211 | |||
|TSSclassifier=S | |||
|UniProt=P37059 | |||
|association_with_transcript=7bp_to_ENST00000199936_5end | |||
|coexpression_cluster_id=C1223 | |||
|description=CAGE_peak_3_at_HSD17B2_5end | |||
|id=chr16:82068873..82068889,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.71e-17!254;CL:0000220!9.15e-14!246;CL:0002321!2.02e-13!248;CL:0000223!4.89e-12!59;CL:0002139!1.29e-08!24;CL:0000115!1.56e-08!35;CL:0000181!4.65e-08!12;CL:0000417!4.65e-08!12;CL:0000668!4.65e-08!12;CL:0000414!4.65e-08!12;CL:0000412!4.65e-08!12;CL:0000182!4.65e-08!12;CL:0005020!1.34e-07!6;CL:0002138!1.34e-07!6;CL:0005022!1.34e-07!6;CL:0002076!3.49e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.40e-12;12!CL:0002138;5.09e-11;6!CL:0002139;4.37e-09;24!CL:0000115;1.87e-08;36!CL:0002586;8.96e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.61e-16,253;CL:0000223,4.54e-15,58;CL:0000182,2.64e-12,12;CL:0002321,7.07e-12,250;CL:0005020,5.16e-11,6;CL:0002138,5.16e-11,6;CL:0005022,5.16e-11,6;CL:0000115,1.78e-10,36;CL:0002139,4.20e-09,24;CL:0002078,2.04e-07,45;CL:0002076,2.45e-07,42;CL:0002586,8.99e-07,3 | |||
|ontology_enrichment_development_v019=CL:0005022;5.09e-11;6!UBERON:0004161;5.18e-11;11!UBERON:0009497;5.41e-09;13!CL:0000223;8.23e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p3@HSD17B2 | |||
}} |
Revision as of 11:45, 11 September 2013
Short description: | p3@HSD17B2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_HSD17B2_5end |
Coexpression cluster: | C1223_Retinal_tubular_Endothelial_placenta_small_temporal_duodenum |
Association with transcript: | 7bp_to_ENST00000199936_5end |
EntrezGene: | HSD17B2 |
HGNC: | 5211 |
UniProt: | P37059 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.61e-16 | 253 |
endodermal cell | 4.54e-15 | 58 |
hepatocyte | 2.64e-12 | 12 |
embryonic cell | 7.07e-12 | 250 |
lymphangioblast | 5.16e-11 | 6 |
endothelial cell of lymphatic vessel | 5.16e-11 | 6 |
vascular lymphangioblast | 5.16e-11 | 6 |
endothelial cell | 1.78e-10 | 36 |
endothelial cell of vascular tree | 4.20e-09 | 24 |
meso-epithelial cell | 2.04e-07 | 45 |
endo-epithelial cell | 2.45e-07 | 42 |
retinal pigment epithelial cell | 8.99e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.