FFCP PHASE1:Hg19::chr17:39678062..39678076,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3866|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6421|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000470004_5end|description=CAGE_peak_6_at_KRT15_5end|id=chr17:39678062..39678076,-|ontology_enrichment_celltype=CL:0000066!1.04e-23!254;CL:0000223!1.20e-17!59;CL:0002076!5.42e-17!43;CL:0002251!4.44e-09!21|ontology_enrichment_celltype_v019=CL:0002252;1.40e-14;1!CL:0002251;6.07e-11;20!CL:0002262;6.14e-08;2!CL:1000398;6.14e-08;2|ontology_enrichment_celltype_v019_2=CL:0002252,7.13e-15,1;CL:0002251,5.48e-11,20;CL:0000223,5.64e-08,58;CL:0002262,5.74e-08,2;CL:1000398,5.74e-08,2;CL:0002076,6.49e-08,42|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!1.86e-18!106;DOID:1749!6.14e-16!14;DOID:0050687!7.18e-16!143;DOID:14566!1.30e-13!239;DOID:162!1.04e-11!235|ontology_enrichment_disease_v019=DOID:1749;1.21e-15;14!DOID:3151;1.40e-14;1!DOID:178;1.40e-14;1!DOID:326;1.40e-14;1!DOID:3978;1.40e-14;1!DOID:3394;1.40e-14;1!DOID:5844;1.40e-14;1!DOID:3149;1.40e-14;1!DOID:3451;6.14e-08;2!DOID:4159;6.14e-08;2!DOID:114;6.14e-08;2!DOID:0060122;6.14e-08;2|ontology_enrichment_disease_v019_2=DOID:1749,1.26e-15,14;DOID:178,8.17e-15,1;DOID:326,8.17e-15,1;DOID:3978,8.17e-15,1;DOID:3394,8.17e-15,1;DOID:5844,8.17e-15,1;DOID:3151,3.15e-14,1;DOID:3149,3.15e-14,1;DOID:114,4.69e-08,2;DOID:3451,9.19e-08,2;DOID:4159,9.19e-08,2;DOID:0060122,9.19e-08,2|ontology_enrichment_uberon=UBERON:0002294!1.09e-09!7;UBERON:0001173!1.09e-09!7;UBERON:0004912!1.09e-09!7;UBERON:0003729!3.86e-09!5;UBERON:0004119!1.27e-08!169;UBERON:0000925!1.27e-08!169;UBERON:0006595!1.27e-08!169;UBERON:0000344!2.05e-08!12;UBERON:0003343!6.60e-08!4;UBERON:0004785!6.60e-08!4|ontology_enrichment_uberon_v019=UBERON:0003343;1.41e-30;4!UBERON:0004785;1.41e-30;4!UBERON:0000974;1.24e-20;6!UBERON:0000997;4.72e-15;1!UBERON:0005056;4.72e-15;1!UBERON:0004176;4.72e-15;1!UBERON:0003729;7.44e-10;13!UBERON:0001281;6.14e-08;2!UBERON:0003497;6.14e-08;2!UBERON:0003909;6.14e-08;2!UBERON:0003835;6.14e-08;2!UBERON:0000161;6.63e-07;19!UBERON:0000166;6.63e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.57e-30,4;UBERON:0004785,1.57e-30,4;UBERON:0000997,4.73e-15,1;UBERON:0005056,4.73e-15,1;UBERON:0000974,1.27e-12,10;UBERON:0003729,7.67e-10,13;UBERON:0001281,5.74e-08,2;UBERON:0003497,5.74e-08,2;UBERON:0003909,5.74e-08,2;UBERON:0003835,5.74e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.368965315629341,0.171567810298526,0,0,0.100528972411631,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97028749946266,0.871901815541886,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0,0,0,0.241718899183244,0.601519410909855,0.828728900423067,0,0,0,0,0,0,0,0.105551628892876,1.13733384070897,0,0.215915916102139,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,1.34060455107157,0,0.0941438007767792,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11362469558097,0,0,0,0,0,0,0,0,0.284136146806413,0.23874448473769,0.296964680832639,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0,0.269605053441981,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.0769502585037971,0.227884111694002,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0.189753732724185,0,0.632994193584081,0,0.848118428603645,0,0,0,0,0,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0.694238953340524,6.66348302417768,0.522355239482415,0,0.171986032471617,0.290268993867255,0.438535902517113,0.328461828212837,0,0,0.225980740780532,0.137041924646751,0,0,0.391102765469606,0.160317640503067,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0.407712618220842,0.627617077873999,0.101998217636322,0,0,0,0,0,0,0,0,0,1.59743200399193,0,0,0,0.3602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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3866 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6421 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000470004_5end | |||
|description=CAGE_peak_6_at_KRT15_5end | |||
|id=chr17:39678062..39678076,- | |||
|ontology_enrichment_celltype=CL:0000066!1.04e-23!254;CL:0000223!1.20e-17!59;CL:0002076!5.42e-17!43;CL:0002251!4.44e-09!21 | |||
|ontology_enrichment_celltype_v019=CL:0002252;1.40e-14;1!CL:0002251;6.07e-11;20!CL:0002262;6.14e-08;2!CL:1000398;6.14e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002252,7.13e-15,1;CL:0002251,5.48e-11,20;CL:0000223,5.64e-08,58;CL:0002262,5.74e-08,2;CL:1000398,5.74e-08,2;CL:0002076,6.49e-08,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.86e-18!106;DOID:1749!6.14e-16!14;DOID:0050687!7.18e-16!143;DOID:14566!1.30e-13!239;DOID:162!1.04e-11!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.21e-15;14!DOID:3151;1.40e-14;1!DOID:178;1.40e-14;1!DOID:326;1.40e-14;1!DOID:3978;1.40e-14;1!DOID:3394;1.40e-14;1!DOID:5844;1.40e-14;1!DOID:3149;1.40e-14;1!DOID:3451;6.14e-08;2!DOID:4159;6.14e-08;2!DOID:114;6.14e-08;2!DOID:0060122;6.14e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.26e-15,14;DOID:178,8.17e-15,1;DOID:326,8.17e-15,1;DOID:3978,8.17e-15,1;DOID:3394,8.17e-15,1;DOID:5844,8.17e-15,1;DOID:3151,3.15e-14,1;DOID:3149,3.15e-14,1;DOID:114,4.69e-08,2;DOID:3451,9.19e-08,2;DOID:4159,9.19e-08,2;DOID:0060122,9.19e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002294!1.09e-09!7;UBERON:0001173!1.09e-09!7;UBERON:0004912!1.09e-09!7;UBERON:0003729!3.86e-09!5;UBERON:0004119!1.27e-08!169;UBERON:0000925!1.27e-08!169;UBERON:0006595!1.27e-08!169;UBERON:0000344!2.05e-08!12;UBERON:0003343!6.60e-08!4;UBERON:0004785!6.60e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;1.41e-30;4!UBERON:0004785;1.41e-30;4!UBERON:0000974;1.24e-20;6!UBERON:0000997;4.72e-15;1!UBERON:0005056;4.72e-15;1!UBERON:0004176;4.72e-15;1!UBERON:0003729;7.44e-10;13!UBERON:0001281;6.14e-08;2!UBERON:0003497;6.14e-08;2!UBERON:0003909;6.14e-08;2!UBERON:0003835;6.14e-08;2!UBERON:0000161;6.63e-07;19!UBERON:0000166;6.63e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.57e-30,4;UBERON:0004785,1.57e-30,4;UBERON:0000997,4.73e-15,1;UBERON:0005056,4.73e-15,1;UBERON:0000974,1.27e-12,10;UBERON:0003729,7.67e-10,13;UBERON:0001281,5.74e-08,2;UBERON:0003497,5.74e-08,2;UBERON:0003909,5.74e-08,2;UBERON:0003835,5.74e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.368965315629341,0.171567810298526,0,0,0.100528972411631,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97028749946266,0.871901815541886,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0,0,0,0.241718899183244,0.601519410909855,0.828728900423067,0,0,0,0,0,0,0,0.105551628892876,1.13733384070897,0,0.215915916102139,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,1.34060455107157,0,0.0941438007767792,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11362469558097,0,0,0,0,0,0,0,0,0.284136146806413,0.23874448473769,0.296964680832639,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0,0.269605053441981,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.0769502585037971,0.227884111694002,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0.189753732724185,0,0.632994193584081,0,0.848118428603645,0,0,0,0,0,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0.694238953340524,6.66348302417768,0.522355239482415,0,0.171986032471617,0.290268993867255,0.438535902517113,0.328461828212837,0,0,0.225980740780532,0.137041924646751,0,0,0.391102765469606,0.160317640503067,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0.407712618220842,0.627617077873999,0.101998217636322,0,0,0,0,0,0,0,0,0,1.59743200399193,0,0,0,0.360299883542404,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,1.0063040627978,0,0,0,0,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0,0,0,0,0,0,0,1.40963004463334,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.874862855734746,0,0,0.235265819698172,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0.406870733204662,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0.385239660814607,0,0,0,0,0,0.358177682162975,0,0,0.176689145945881,0,0.675769762612291,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.139879507719444,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57036349601641,2.00548529691159,1.10057159113007,0.231051332300676,0,0,0,0,0,0,0.261906694481422,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.472775363535873,0.222462803784138,0,0,0,0,0.647782773655864,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.22910686854405,0,0,0,0.294450700845729,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0.357107877211315,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509944148709909,1.06886962106224,0.459474497674225,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0.217716747896961,0,0,0.215166616178029,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p6@KRT15 | |||
}} |
Revision as of 13:34, 11 September 2013
Short description: | p6@KRT15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_KRT15_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000470004_5end |
EntrezGene: | KRT15 |
HGNC: | 6421 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of esophagus | 7.13e-15 | 1 |
epithelial cell of alimentary canal | 5.48e-11 | 20 |
endodermal cell | 5.64e-08 | 58 |
endothelial cell of sinusoid | 5.74e-08 | 2 |
endothelial cell of hepatic sinusoid | 5.74e-08 | 2 |
endo-epithelial cell | 6.49e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.57e-30 | 4 |
respiratory system mucosa | 1.57e-30 | 4 |
mammalian vulva | 4.73e-15 | 1 |
external female genitalia | 4.73e-15 | 1 |
neck | 1.27e-12 | 10 |
mouth mucosa | 7.67e-10 | 13 |
hepatic sinusoid | 5.74e-08 | 2 |
abdomen blood vessel | 5.74e-08 | 2 |
sinusoid | 5.74e-08 | 2 |
abdominal segment blood vessel | 5.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.26e-15 | 14 |
vascular disease | 8.17e-15 | 1 |
ischemia | 8.17e-15 | 1 |
extrinsic cardiomyopathy | 8.17e-15 | 1 |
myocardial ischemia | 8.17e-15 | 1 |
myocardial infarction | 8.17e-15 | 1 |
skin squamous cell carcinoma | 3.15e-14 | 1 |
keratoacanthoma | 3.15e-14 | 1 |
heart disease | 4.69e-08 | 2 |
skin carcinoma | 9.19e-08 | 2 |
skin cancer | 9.19e-08 | 2 |
integumentary system cancer | 9.19e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.