FFCP PHASE1:Hg19::chr19:1257414..1257448,+: Difference between revisions
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{{FFCP | 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1203278,1.86494547746733,1.87790324803345,6.91259661814092,0.860454717640555,3.0766320189947,3.66417640464378,11.4314503551551,3.2074961596167,3.72247662797184,9.55538938977433,11.4092540433748,1.86485443868962,4.3890452993617,17.4805786040732,8.11036174164351,4.6392577253528,1.94284397223656,0.233939463462106,6.96327713064789,0.951360726220549,1.35535298446752,0.879524133963433,1.50962843566674,6.94567422971502,3.0598338470554,5.64380755633827,1.47088993052343,3.77082475362602,5.30032861210352,1.18818560130834,2.113278637917,3.73839652313197,6.39090642263004,2.32048396704878,2.19870543034844,12.8558835796073,3.17605384544123,9.06727443587601,6.57302749421866,4.12856355064087,2.72345207987757,6.94194873650012,2.03974470572744,5.67255897442491,4.7612415646386,5.20793025433452,4.62175628631418,5.19151874548547,2.3971620718665,3.93356059069304,3.4208595273088,5.609385635809,5.07713070004565,6.70832766604368,3.25919801080088,2.80381183407486,2.41167717140561,4.97501663675268,1.55149493792843,7.24995538463335,2.61870874610114,2.84191203278427,2.48298857183432,2.4669009767735,2.41859201457027,5.45716410187192,8.70866991587845,4.79126621519393,2.76143417359809,3.72955468041917,2.32862249582209,3.17472747582801,5.22963994800806,34.7530108116492,2.15580485055809,0,0.611207220914332,2.84827324821017,2.66302709674205,3.42165449104745,2.56454793842586|short_description=p3@MIDN}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=90007 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16298 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=169bp_to_AK075506_5end | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_3_at_MIDN_5end | |||
|id=chr19:1257414..1257448,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.89e-13!76;CL:0000860!1.36e-12!45;CL:0002057!7.22e-12!42;CL:0000557!7.75e-10!71;CL:0002194!2.18e-09!63;CL:0000576!2.18e-09!63;CL:0000040!2.18e-09!63;CL:0000559!2.18e-09!63;CL:0002009!4.14e-09!65;CL:0000839!4.44e-09!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.45e-10;33!CL:0002057;6.45e-10;33!CL:0000473;2.20e-08;39!CL:0000234;2.20e-08;39!CL:0000766;5.87e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.39e-13,72;CL:0000860,6.80e-12,42;CL:0002057,6.80e-12,42;CL:0000473,7.66e-12,48;CL:0000234,7.66e-12,48;CL:0000557,3.27e-09,67;CL:0002194,8.22e-09,59;CL:0000576,8.22e-09,59;CL:0000040,8.22e-09,59;CL:0000559,8.22e-09,59;CL:0000839,1.51e-08,66;CL:0002009,1.73e-08,61 | |||
|ontology_enrichment_development_v019=CL:0002057;3.28e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.30e-10!80;UBERON:0002390!1.07e-09!102;UBERON:0003061!1.07e-09!102;UBERON:0001474!1.46e-09!86;UBERON:0002193!1.29e-08!112;UBERON:0004765!1.70e-08!101;UBERON:0001434!1.70e-08!101;UBERON:0002405!2.39e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.63e-09,76;UBERON:0002390,4.06e-09,98;UBERON:0003061,4.06e-09,98;UBERON:0001474,5.98e-09,82;UBERON:0004765,1.01e-08,90;UBERON:0001434,1.40e-08,100;UBERON:0002193,4.81e-08,108;UBERON:0002405,5.01e-07,93 | |||
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| |||
|short_description=p3@MIDN | |||
}} |
Revision as of 18:46, 11 September 2013
Short description: | p3@MIDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_MIDN_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 169bp_to_AK075506_5end |
EntrezGene: | MIDN |
HGNC: | 16298 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.39e-13 | 72 |
classical monocyte | 6.80e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.80e-12 | 42 |
defensive cell | 7.66e-12 | 48 |
phagocyte | 7.66e-12 | 48 |
granulocyte monocyte progenitor cell | 3.27e-09 | 67 |
monopoietic cell | 8.22e-09 | 59 |
monocyte | 8.22e-09 | 59 |
monoblast | 8.22e-09 | 59 |
promonocyte | 8.22e-09 | 59 |
myeloid lineage restricted progenitor cell | 1.51e-08 | 66 |
macrophage dendritic cell progenitor | 1.73e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.63e-09 | 76 |
hematopoietic system | 4.06e-09 | 98 |
blood island | 4.06e-09 | 98 |
bone element | 5.98e-09 | 82 |
skeletal element | 1.01e-08 | 90 |
skeletal system | 1.40e-08 | 100 |
hemolymphoid system | 4.81e-08 | 108 |
immune system | 5.01e-07 | 93 |
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