FFCP PHASE1:Hg19::chr2:192711954..192711965,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8436|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10690|TSSclassifier=S|UniProt=O95810|association_with_transcript=15bp_to_ENST00000304141,uc002utb.2_5end|coexpression_cluster_id=C64|description=CAGE_peak_2_at_SDPR_5end|id=chr2:192711954..192711965,-|ontology_enrichment_celltype=CL:0002139!6.91e-12!24;CL:0000213!8.43e-11!57;CL:0000215!8.43e-11!57;CL:0000115!1.20e-09!35;CL:0000222!1.32e-08!119;CL:0002078!1.62e-08!44;CL:0000071!2.40e-08!18;CL:0002546!2.40e-08!18|ontology_enrichment_celltype_v019=CL:0002139;4.86e-17;24!CL:0000115;1.27e-14;36!CL:0000071;1.61e-12;18!CL:0000213;7.74e-10;58!CL:0000215;7.74e-10;58!CL:0002078;5.49e-09;45!CL:0000097;1.52e-08;5!CL:1000413;1.85e-07;9!CL:0000163;3.35e-07;9|ontology_enrichment_celltype_v019_2=CL:0002139,3.79e-17,24;CL:0000115,1.21e-16,36;CL:0000213,2.31e-15,58;CL:0000215,2.31e-15,58;CL:0002078,8.19e-14,45;CL:0000071,1.16e-12,18;CL:0002546,1.16e-12,18;CL:0000097,1.57e-08,5;CL:0002028,1.57e-08,5;CL:1000413,1.24e-07,9;CL:0000163,3.37e-07,9|ontology_enrichment_development_v019=CL:0002546;1.61e-12;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001009!1.74e-15!113;UBERON:0007023!1.74e-14!115;UBERON:0004535!2.42e-14!110;UBERON:0004111!1.23e-09!241;UBERON:0004872!1.66e-09!84;UBERON:0002049!1.67e-09!79;UBERON:0007798!1.67e-09!79;UBERON:0000477!2.02e-09!286;UBERON:0003914!1.03e-08!118;UBERON:0001986!2.40e-08!18;UBERON:0004638!2.40e-08!18;UBERON:0004852!2.40e-08!18;UBERON:0000025!2.72e-08!194;UBERON:0000119!3.45e-08!312;UBERON:0000055!4.38e-08!69;UBERON:0000483!1.14e-07!309;UBERON:0000487!2.99e-07!22|ontology_enrichment_uberon_v019=UBERON:0004638;1.61e-12;18!UBERON:0001986;1.61e-12;18!UBERON:0004852;1.61e-12;18!UBERON:0000487;9.37e-11;22!UBERON:0006914;6.50e-09;25!UBERON:0003915;1.85e-07;9!UBERON:0004700;1.85e-07;9!UBERON:0001917;1.85e-07;9!UBERON:0000490;6.43e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0001009,6.99e-15,112;UBERON:0004535,7.24e-14,109;UBERON:0004638,1.16e-12,18;UBERON:0001986,1.16e-12,18;UBERON:0004852,1.16e-12,18;UBERON:0003914,5.48e-11,117;UBERON:0000487,6.11e-11,22;UBERON:0004872,5.02e-10,83;UBERON:0007023,1.94e-09,114;UBERON:0000055,3.27e-09,68;UBERON:0006914,4.52e-09,25;UBERON:0002049,3.46e-08,78;UBERON:0007798,3.46e-08,78;UBERON:0003915,1.24e-07,9;UBERON:0004700,1.24e-07,9;UBERON:0001917,1.24e-07,9;UBERON:0004111,3.53e-07,240;UBERON:0007500,4.01e-07,59;UBERON:0001981,4.01e-07,59;UBERON:0004537,4.01e-07,59;UBERON:0006965,4.01e-07,59|phase1_expression=0.181678379270557,2.35510576280081,1.83240725324762,0,1.78784437770915,5.23403114460221,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0,0.204000691244253,0,0,0,0,0,0,0.0787107813136792,0,0.767658796194425,0,0,0.30120591877825,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,4.73091478821062,0.722878304769133,0,0.144846518960824,0,0,0.472674085820339,0.443458794925128,0.263504357079378,0.982343066232845,0,0,0,0,0,0,0,0,2.78267370313387,3.4409383804245,1.73570250803797,5.6530794192401,1.25849830862972,1.37559020970034,1.8809546988313,5.68516870172524,5.69226020298736,6.35969164252873,3.22263453687318,0,2.4406205754817,2.20597848207521,0.81014194788176,4.10778750106767,2.46982309888787,3.37834441449967,0,2.84779697870439,2.19842092716489,0,3.87780264148325,0,0,1.13967460498122,0.662045904066094,0.286836620748814,1.06400514659507,6.16745360156538,0,0,2.17847724779836,0.269421344139376,0.980771418680752,0.454072282934794,1.72852777344,0,0.936480230490962,0.570471821544449,0,0.23486899728753,0.485618833104395,0.280901613404497,0,0.122834317311768,0.309977343527296,1.18800285728205,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.150238058906597,2.38207584636044,0.538168907066586,0.427114777637135,0,0.300091096084402,0,1.8034837803194,1.30281799432113,0.337552664482532,0,0.252433774244115,0.184099797284599,0.646584227275248,0,0.302256294682921,0.169560592310488,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69077727312324,2.80483547606892,2.057870056657,0,0,0,1.18157981336281,0,0,1.20097467208968,0.109750285408626,0,0,0,0,1.03993478527958,1.44331342025273,0.463721619900307,0.352226082707465,2.30986316417718,0.925971025153221,3.23432058798817,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0.383382679165211,151.247614034055,20.4272366910684,80.2359807142788,98.7221680906186,49.1083066028618,0,0,0,0,0,0,0,0.897048674762886,0.43596006883328,1.9067954313447,0,0,0,0,0,0,0,0,1.71573592389777,0,0.823240336780769,0,1.42156779497018,0.791951872933429,2.71295439353627,2.61460037580088,6.49824442683371,0,0,0,0.479249710983165,0,2.85273810081437,0.144781306667579,0.410952645100767,1.4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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8436 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10690 | |||
|TSSclassifier=S | |||
|UniProt=O95810 | |||
|association_with_transcript=15bp_to_ENST00000304141,uc002utb.2_5end | |||
|coexpression_cluster_id=C64 | |||
|description=CAGE_peak_2_at_SDPR_5end | |||
|id=chr2:192711954..192711965,- | |||
|ontology_enrichment_celltype=CL:0002139!6.91e-12!24;CL:0000213!8.43e-11!57;CL:0000215!8.43e-11!57;CL:0000115!1.20e-09!35;CL:0000222!1.32e-08!119;CL:0002078!1.62e-08!44;CL:0000071!2.40e-08!18;CL:0002546!2.40e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.86e-17;24!CL:0000115;1.27e-14;36!CL:0000071;1.61e-12;18!CL:0000213;7.74e-10;58!CL:0000215;7.74e-10;58!CL:0002078;5.49e-09;45!CL:0000097;1.52e-08;5!CL:1000413;1.85e-07;9!CL:0000163;3.35e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.79e-17,24;CL:0000115,1.21e-16,36;CL:0000213,2.31e-15,58;CL:0000215,2.31e-15,58;CL:0002078,8.19e-14,45;CL:0000071,1.16e-12,18;CL:0002546,1.16e-12,18;CL:0000097,1.57e-08,5;CL:0002028,1.57e-08,5;CL:1000413,1.24e-07,9;CL:0000163,3.37e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;1.61e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!1.74e-15!113;UBERON:0007023!1.74e-14!115;UBERON:0004535!2.42e-14!110;UBERON:0004111!1.23e-09!241;UBERON:0004872!1.66e-09!84;UBERON:0002049!1.67e-09!79;UBERON:0007798!1.67e-09!79;UBERON:0000477!2.02e-09!286;UBERON:0003914!1.03e-08!118;UBERON:0001986!2.40e-08!18;UBERON:0004638!2.40e-08!18;UBERON:0004852!2.40e-08!18;UBERON:0000025!2.72e-08!194;UBERON:0000119!3.45e-08!312;UBERON:0000055!4.38e-08!69;UBERON:0000483!1.14e-07!309;UBERON:0000487!2.99e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.61e-12;18!UBERON:0001986;1.61e-12;18!UBERON:0004852;1.61e-12;18!UBERON:0000487;9.37e-11;22!UBERON:0006914;6.50e-09;25!UBERON:0003915;1.85e-07;9!UBERON:0004700;1.85e-07;9!UBERON:0001917;1.85e-07;9!UBERON:0000490;6.43e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,6.99e-15,112;UBERON:0004535,7.24e-14,109;UBERON:0004638,1.16e-12,18;UBERON:0001986,1.16e-12,18;UBERON:0004852,1.16e-12,18;UBERON:0003914,5.48e-11,117;UBERON:0000487,6.11e-11,22;UBERON:0004872,5.02e-10,83;UBERON:0007023,1.94e-09,114;UBERON:0000055,3.27e-09,68;UBERON:0006914,4.52e-09,25;UBERON:0002049,3.46e-08,78;UBERON:0007798,3.46e-08,78;UBERON:0003915,1.24e-07,9;UBERON:0004700,1.24e-07,9;UBERON:0001917,1.24e-07,9;UBERON:0004111,3.53e-07,240;UBERON:0007500,4.01e-07,59;UBERON:0001981,4.01e-07,59;UBERON:0004537,4.01e-07,59;UBERON:0006965,4.01e-07,59 | |||
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| |||
|short_description=p2@SDPR | |||
}} |
Revision as of 15:46, 12 September 2013
Short description: | p2@SDPR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SDPR_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | 15bp_to_ENST00000304141, uc002utb.2_5end |
EntrezGene: | SDPR |
HGNC: | 10690 |
UniProt: | O95810 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.79e-17 | 24 |
endothelial cell | 1.21e-16 | 36 |
lining cell | 2.31e-15 | 58 |
barrier cell | 2.31e-15 | 58 |
meso-epithelial cell | 8.19e-14 | 45 |
blood vessel endothelial cell | 1.16e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.16e-12 | 18 |
mast cell | 1.57e-08 | 5 |
basophil mast progenitor cell | 1.57e-08 | 5 |
endothelial cell of artery | 1.24e-07 | 9 |
endocrine cell | 3.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
circulatory system | 6.99e-15 | 112 |
cardiovascular system | 7.24e-14 | 109 |
blood vessel endothelium | 1.16e-12 | 18 |
endothelium | 1.16e-12 | 18 |
cardiovascular system endothelium | 1.16e-12 | 18 |
epithelial tube | 5.48e-11 | 117 |
simple squamous epithelium | 6.11e-11 | 22 |
splanchnic layer of lateral plate mesoderm | 5.02e-10 | 83 |
adult organism | 1.94e-09 | 114 |
vessel | 3.27e-09 | 68 |
squamous epithelium | 4.52e-09 | 25 |
vasculature | 3.46e-08 | 78 |
vascular system | 3.46e-08 | 78 |
endothelial tube | 1.24e-07 | 9 |
arterial system endothelium | 1.24e-07 | 9 |
endothelium of artery | 1.24e-07 | 9 |
anatomical conduit | 3.53e-07 | 240 |
epithelial tube open at both ends | 4.01e-07 | 59 |
blood vessel | 4.01e-07 | 59 |
blood vasculature | 4.01e-07 | 59 |
vascular cord | 4.01e-07 | 59 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.