FFCP PHASE1:Hg19::chr2:238271931..238271942,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C332|description=CAGE_peak_at_chr2:238271931..238271942,-|id=chr2:238271931..238271942,-|ontology_enrichment_celltype=CL:0000055!1.88e-29!180;CL:0000057!7.05e-26!75;CL:0002620!1.38e-15!23;CL:0000048!2.30e-13!430;CL:0000723!1.37e-12!436;CL:0000034!6.22e-12!444;CL:0000183!1.51e-10!59;CL:0000680!4.39e-10!57;CL:0000056!4.39e-10!57;CL:0000355!4.39e-10!57;CL:0000187!1.03e-09!54;CL:0002320!3.23e-09!365;CL:0002570!2.02e-08!8;CL:0000393!8.93e-08!60;CL:0000211!8.93e-08!60;CL:0002371!1.43e-07!591;CL:0000188!2.96e-07!9;CL:0000134!4.08e-07!358|ontology_enrichment_celltype_v019=CL:0002620;6.37e-11;23!CL:0000134;1.25e-10;55!CL:0000048;4.25e-10;58!CL:0002570;7.03e-10;8!CL:0000723;1.06e-09;61!CL:0000499;3.55e-08;28!CL:0000034;3.60e-08;69!CL:0002622;3.27e-07;3|ontology_enrichment_celltype_v019_2=CL:0000057,1.85e-15,76;CL:0000048,3.62e-11,427;CL:0002320,3.72e-11,361;CL:0002620,6.13e-11,23;CL:0000723,9.50e-11,433;CL:0000034,3.29e-10,441;CL:0002570,8.40e-10,8;CL:0000134,9.81e-09,354;CL:0000499,4.05e-08,28;CL:0000219,4.23e-07,386;CL:0002622,4.52e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;9.35e-08;5!DOID:450;9.35e-08;5!DOID:66;9.35e-08;5!DOID:423;9.35e-08;5!DOID:0080000;9.35e-08;5!DOID:11722;9.35e-08;5|ontology_enrichment_disease_v019_2=DOID:17,9.70e-08,5;DOID:450,9.70e-08,5;DOID:66,9.70e-08,5;DOID:423,9.70e-08,5;DOID:0080000,9.70e-08,5;DOID:11722,9.70e-08,5|ontology_enrichment_uberon=UBERON:0004290!2.42e-14!70;UBERON:0000914!1.57e-13!83;UBERON:0002329!1.57e-13!83;UBERON:0003077!1.57e-13!83;UBERON:0003059!1.57e-13!83;UBERON:0007282!1.57e-13!83;UBERON:0009618!1.57e-13!83;UBERON:0007285!1.57e-13!83;UBERON:0002199!1.14e-12!45;UBERON:0002416!1.14e-12!45;UBERON:0000486!8.68e-12!82;UBERON:0002097!1.11e-11!40;UBERON:0003102!3.12e-11!95;UBERON:0002385!5.31e-11!63;UBERON:0001015!5.31e-11!63;UBERON:0000383!5.31e-11!63;UBERON:0001134!7.14e-11!61;UBERON:0002036!7.14e-11!61;UBERON:0003082!7.14e-11!61;UBERON:0002384!5.16e-10!375;UBERON:0005256!6.53e-09!143;UBERON:0001013!3.58e-07!14|ontology_enrichment_uberon_v019=UBERON:0002384;1.28e-07;198!UBERON:0002199;2.54e-07;46!UBERON:0002416;2.54e-07;46!UBERON:0003102;6.98e-07;50!UBERON:0001013;7.34e-07;14!UBERON:0002097;7.37e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.03e-12,371;UBERON:0002199,1.94e-10,46;UBERON:0002416,1.94e-10,46;UBERON:0003102,2.78e-08,99;UBERON:0002097,3.02e-08,41;UBERON:0001013,8.23e-07,14|phase1_expression=0.726713517082227,1.2846031433459,0,0,1.78784437770915,0.872338524100369,0,0,1.30592814099919,0,0,0,0.263766978228454,0.74259811776028,1.98838425436749,2.6893005858071,0.602694528023977,1.46062018077475,1.46379839637152,0.123121058076788,0.408001382488506,0.313454721478088,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,1.00267582127178,1.01392563272577,2.3858578411533,2.91980922181582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.506522046658319,0.132409180813219,6.02356903572509,1.77334191099179,0,0,0.49333509683432,0.311211035399766,0.404132016209064,0.163461903113459,3.02714855289863,1.15235184896,0.468642863667593,0.936480230490962,0.570471821544449,1.79338416662161,0.704606991862589,0.161872944368132,0.140450806702248,0.61246251376468,0.859840221182376,1.54988671763648,0,2.71993622206413,0.910161361938026,0,0,0.750711119231785,0,0,0.30648779579902,0.45071417671979,0.113432183160021,6.45802688479903,2.77624605464138,2.11931901159562,4.50136644126603,0.721367704669072,2.57640540045629,1.11670113798954,2.53164498361899,1.07180705677318,3.02920529092937,0.460249493211497,0.969876340912871,6.74518225781567,0.302256294682921,0.67824236924195,0,0,0,0,0,0.116193942869518,0,0,0,3.12899064659632,2.57296375277154,0,2.3218396401599,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0,1.62904152655162,2.07986957055916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.560655421726804,0,0.2933531432838,0.129271715757778,10.7296933755565,0.845302752556,2.39344304926383,1.04007436911366,1.02882949704857,0,0.799266537048298,0.857867961948885,4.34097284313154,2.46972101034231,0.65147236858747,0.355391948742546,0.791951872933429,0,0,0.099972991182057,0,0,0,0.718874566474748,1.14861935834114,2.85273810081437,0.579125226670317,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,1.50051156317903,1.89885516589815,1.24782516918484,1.07057393278297,0.630809660135739,1.05427273493442,0.601892199455438,0,0,0.664225598535437,1.10621501125022,0.60818530127658,1.95801157462741,5.49029478097369,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C332 | |||
|description=CAGE_peak_at_chr2:238271931..238271942,- | |||
|id=chr2:238271931..238271942,- | |||
|ontology_enrichment_celltype=CL:0000055!1.88e-29!180;CL:0000057!7.05e-26!75;CL:0002620!1.38e-15!23;CL:0000048!2.30e-13!430;CL:0000723!1.37e-12!436;CL:0000034!6.22e-12!444;CL:0000183!1.51e-10!59;CL:0000680!4.39e-10!57;CL:0000056!4.39e-10!57;CL:0000355!4.39e-10!57;CL:0000187!1.03e-09!54;CL:0002320!3.23e-09!365;CL:0002570!2.02e-08!8;CL:0000393!8.93e-08!60;CL:0000211!8.93e-08!60;CL:0002371!1.43e-07!591;CL:0000188!2.96e-07!9;CL:0000134!4.08e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.37e-11;23!CL:0000134;1.25e-10;55!CL:0000048;4.25e-10;58!CL:0002570;7.03e-10;8!CL:0000723;1.06e-09;61!CL:0000499;3.55e-08;28!CL:0000034;3.60e-08;69!CL:0002622;3.27e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.85e-15,76;CL:0000048,3.62e-11,427;CL:0002320,3.72e-11,361;CL:0002620,6.13e-11,23;CL:0000723,9.50e-11,433;CL:0000034,3.29e-10,441;CL:0002570,8.40e-10,8;CL:0000134,9.81e-09,354;CL:0000499,4.05e-08,28;CL:0000219,4.23e-07,386;CL:0002622,4.52e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;9.35e-08;5!DOID:450;9.35e-08;5!DOID:66;9.35e-08;5!DOID:423;9.35e-08;5!DOID:0080000;9.35e-08;5!DOID:11722;9.35e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.70e-08,5;DOID:450,9.70e-08,5;DOID:66,9.70e-08,5;DOID:423,9.70e-08,5;DOID:0080000,9.70e-08,5;DOID:11722,9.70e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0004290!2.42e-14!70;UBERON:0000914!1.57e-13!83;UBERON:0002329!1.57e-13!83;UBERON:0003077!1.57e-13!83;UBERON:0003059!1.57e-13!83;UBERON:0007282!1.57e-13!83;UBERON:0009618!1.57e-13!83;UBERON:0007285!1.57e-13!83;UBERON:0002199!1.14e-12!45;UBERON:0002416!1.14e-12!45;UBERON:0000486!8.68e-12!82;UBERON:0002097!1.11e-11!40;UBERON:0003102!3.12e-11!95;UBERON:0002385!5.31e-11!63;UBERON:0001015!5.31e-11!63;UBERON:0000383!5.31e-11!63;UBERON:0001134!7.14e-11!61;UBERON:0002036!7.14e-11!61;UBERON:0003082!7.14e-11!61;UBERON:0002384!5.16e-10!375;UBERON:0005256!6.53e-09!143;UBERON:0001013!3.58e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;1.28e-07;198!UBERON:0002199;2.54e-07;46!UBERON:0002416;2.54e-07;46!UBERON:0003102;6.98e-07;50!UBERON:0001013;7.34e-07;14!UBERON:0002097;7.37e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.03e-12,371;UBERON:0002199,1.94e-10,46;UBERON:0002416,1.94e-10,46;UBERON:0003102,2.78e-08,99;UBERON:0002097,3.02e-08,41;UBERON:0001013,8.23e-07,14 | |||
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| |||
|short_description=p@chr2:238271931..238271942,- | |||
}} |
Revision as of 17:36, 12 September 2013
Short description: | p@chr2:238271931..238271942, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:238271931..238271942, - |
Coexpression cluster: | C332_Fibroblast_Smooth_Mesenchymal_mesenchymal_Chondrocyte_Skeletal_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.85e-15 | 76 |
multi fate stem cell | 3.62e-11 | 427 |
connective tissue cell | 3.72e-11 | 361 |
skin fibroblast | 6.13e-11 | 23 |
somatic stem cell | 9.50e-11 | 433 |
stem cell | 3.29e-10 | 441 |
mesenchymal stem cell of adipose | 8.40e-10 | 8 |
mesenchymal cell | 9.81e-09 | 354 |
stromal cell | 4.05e-08 | 28 |
motile cell | 4.23e-07 | 386 |
prostate stromal cell | 4.52e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.03e-12 | 371 |
integument | 1.94e-10 | 46 |
integumental system | 1.94e-10 | 46 |
surface structure | 2.78e-08 | 99 |
skin of body | 3.02e-08 | 41 |
adipose tissue | 8.23e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.70e-08 | 5 |
myotonic disease | 9.70e-08 | 5 |
muscle tissue disease | 9.70e-08 | 5 |
myopathy | 9.70e-08 | 5 |
muscular disease | 9.70e-08 | 5 |
myotonic dystrophy | 9.70e-08 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.