FFCP PHASE1:Hg19::chr20:6022771..6022780,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=164312|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=16208|TSSclassifier=W|UniProt=|association_with_transcript=177bp_to_BC019612_5end|coexpression_cluster_id=C548|description=CAGE_peak_12_at_LRRN4_5end|id=chr20:6022771..6022780,-|ontology_enrichment_celltype=CL:0000077!6.64e-20!19;CL:1000449!6.89e-18!16;CL:1000497!8.29e-16!18;CL:0002518!8.29e-16!18;CL:1000507!1.58e-12!12;CL:1000494!1.58e-12!12;CL:0002681!1.47e-11!13;CL:0002584!1.47e-11!13;CL:0000213!3.65e-09!57;CL:0000215!3.65e-09!57;CL:0000239!4.68e-09!3;CL:1000615!4.68e-09!3;CL:0002306!4.68e-09!3;CL:0002568!3.40e-07!1;CL:0000666!3.97e-07!4;CL:0002188!3.97e-07!4;CL:0002336!4.61e-07!1;CL:0002261!4.61e-07!1;CL:0002170!4.61e-07!1|ontology_enrichment_celltype_v019=CL:0000632;3.66e-23;3|ontology_enrichment_celltype_v019_2=CL:0000632,4.09e-23,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!2.18e-07!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004211!6.89e-18!16;UBERON:0001285!6.89e-18!16;UBERON:0007684!6.89e-18!16;UBERON:0003220!6.89e-18!16;UBERON:0004208!6.89e-18!16;UBERON:0006555!8.69e-17!17;UBERON:0005103!8.69e-17!17;UBERON:0000083!8.69e-17!17;UBERON:0009201!8.69e-17!17;UBERON:0004819!8.69e-17!17;UBERON:0006553!8.69e-17!17;UBERON:0003074!8.69e-17!17;UBERON:0003060!8.69e-17!17;UBERON:0000080!8.29e-16!18;UBERON:0002120!8.29e-16!18;UBERON:0004875!8.29e-16!18;UBERON:0005721!8.29e-16!18;UBERON:0005754!8.29e-16!18;UBERON:0007297!8.29e-16!18;UBERON:0004876!3.84e-14!20;UBERON:0003887!1.99e-13!21;UBERON:0002113!3.30e-13!27;UBERON:0003918!3.30e-13!27;UBERON:0005095!3.30e-13!27;UBERON:0007687!3.30e-13!27;UBERON:0001851!3.65e-13!16;UBERON:0009773!1.58e-12!12;UBERON:0001231!1.58e-12!12;UBERON:0004810!1.58e-12!12;UBERON:0003064!8.26e-12!37;UBERON:0001225!1.47e-11!13;UBERON:0008987!1.47e-11!13;UBERON:0000489!5.79e-11!32;UBERON:0000058!1.11e-10!26;UBERON:0006554!1.20e-09!44;UBERON:0001008!2.12e-09!45;UBERON:0005172!2.59e-09!55;UBERON:0005173!2.59e-09!55;UBERON:0006853!4.68e-09!3;UBERON:0007685!4.68e-09!3;UBERON:0004134!4.68e-09!3;UBERON:0000353!8.72e-09!17;UBERON:0002417!3.14e-08!61;UBERON:0000916!3.14e-08!61;UBERON:0002171!1.51e-07!1;UBERON:0006518!1.51e-07!1;UBERON:0008949!1.51e-07!1;UBERON:0000101!1.51e-07!1;UBERON:0002167!1.51e-07!1|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0.871533458600294,2.69927076191554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.15403067420883,0.784349769176855,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601030435988874,1.52322084867518,0.406870733204662,0,0.644463342254931,0,0,0,0,0,0,0,0.214441591374926,0,0.226705925512272,0,0,0,0.617602894321944,0.657852148736121,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p12@LRRN4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=164312 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16208 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=177bp_to_BC019612_5end | |||
|coexpression_cluster_id=C548 | |||
|description=CAGE_peak_12_at_LRRN4_5end | |||
|id=chr20:6022771..6022780,- | |||
|ontology_enrichment_celltype=CL:0000077!6.64e-20!19;CL:1000449!6.89e-18!16;CL:1000497!8.29e-16!18;CL:0002518!8.29e-16!18;CL:1000507!1.58e-12!12;CL:1000494!1.58e-12!12;CL:0002681!1.47e-11!13;CL:0002584!1.47e-11!13;CL:0000213!3.65e-09!57;CL:0000215!3.65e-09!57;CL:0000239!4.68e-09!3;CL:1000615!4.68e-09!3;CL:0002306!4.68e-09!3;CL:0002568!3.40e-07!1;CL:0000666!3.97e-07!4;CL:0002188!3.97e-07!4;CL:0002336!4.61e-07!1;CL:0002261!4.61e-07!1;CL:0002170!4.61e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000632;3.66e-23;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,4.09e-23,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.18e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004211!6.89e-18!16;UBERON:0001285!6.89e-18!16;UBERON:0007684!6.89e-18!16;UBERON:0003220!6.89e-18!16;UBERON:0004208!6.89e-18!16;UBERON:0006555!8.69e-17!17;UBERON:0005103!8.69e-17!17;UBERON:0000083!8.69e-17!17;UBERON:0009201!8.69e-17!17;UBERON:0004819!8.69e-17!17;UBERON:0006553!8.69e-17!17;UBERON:0003074!8.69e-17!17;UBERON:0003060!8.69e-17!17;UBERON:0000080!8.29e-16!18;UBERON:0002120!8.29e-16!18;UBERON:0004875!8.29e-16!18;UBERON:0005721!8.29e-16!18;UBERON:0005754!8.29e-16!18;UBERON:0007297!8.29e-16!18;UBERON:0004876!3.84e-14!20;UBERON:0003887!1.99e-13!21;UBERON:0002113!3.30e-13!27;UBERON:0003918!3.30e-13!27;UBERON:0005095!3.30e-13!27;UBERON:0007687!3.30e-13!27;UBERON:0001851!3.65e-13!16;UBERON:0009773!1.58e-12!12;UBERON:0001231!1.58e-12!12;UBERON:0004810!1.58e-12!12;UBERON:0003064!8.26e-12!37;UBERON:0001225!1.47e-11!13;UBERON:0008987!1.47e-11!13;UBERON:0000489!5.79e-11!32;UBERON:0000058!1.11e-10!26;UBERON:0006554!1.20e-09!44;UBERON:0001008!2.12e-09!45;UBERON:0005172!2.59e-09!55;UBERON:0005173!2.59e-09!55;UBERON:0006853!4.68e-09!3;UBERON:0007685!4.68e-09!3;UBERON:0004134!4.68e-09!3;UBERON:0000353!8.72e-09!17;UBERON:0002417!3.14e-08!61;UBERON:0000916!3.14e-08!61;UBERON:0002171!1.51e-07!1;UBERON:0006518!1.51e-07!1;UBERON:0008949!1.51e-07!1;UBERON:0000101!1.51e-07!1;UBERON:0002167!1.51e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0.871533458600294,2.69927076191554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.15403067420883,0.784349769176855,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601030435988874,1.52322084867518,0.406870733204662,0,0.644463342254931,0,0,0,0,0,0,0,0.214441591374926,0,0.226705925512272,0,0,0,0.617602894321944,0.657852148736121,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@LRRN4 | |||
}} |
Revision as of 09:28, 12 September 2013
Short description: | p12@LRRN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_LRRN4_5end |
Coexpression cluster: | C548_Mesothelial_mesenchymal_rhabdomyosarcoma_Renal_mesothelioma_Hepatic_clear |
Association with transcript: | 177bp_to_BC019612_5end |
EntrezGene: | LRRN4 |
HGNC: | 16208 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 4.09e-23 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.