FFCP PHASE1:Hg19::chr20:9147059..9147072,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5332|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9059|TSSclassifier=S|UniProt=B1AJW1|association_with_transcript=54bp_to_ENST00000416836_5end|coexpression_cluster_id=C37|description=CAGE_peak_11_at_PLCB4_5end|id=chr20:9147059..9147072,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0007123;9.77e-33;5!UBERON:0006298;8.95e-20;1!UBERON:0008801;1.08e-19;1!UBERON:0010227;2.06e-19;1!UBERON:0003056;2.19e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3112;3.91e-19;1!DOID:9119;3.91e-19;1|ontology_enrichment_disease_v019_2=DOID:9119,2.71e-19,1;DOID:3112,3.25e-19,1|ontology_enrichment_uberon=UBERON:0007023!2.03e-40!115;UBERON:0001049!1.31e-13!57;UBERON:0005068!1.31e-13!57;UBERON:0006241!1.31e-13!57;UBERON:0007135!1.31e-13!57;UBERON:0003075!3.29e-12!86;UBERON:0007284!3.29e-12!86;UBERON:0002346!1.99e-11!90;UBERON:0002616!2.00e-11!59;UBERON:0000153!5.70e-11!129;UBERON:0007811!5.70e-11!129;UBERON:0002046!9.52e-11!5;UBERON:0004117!9.52e-11!5;UBERON:0007689!9.52e-11!5;UBERON:0007123!9.52e-11!5;UBERON:0003091!9.52e-11!5;UBERON:0005743!1.47e-09!86;UBERON:0002020!2.07e-09!34;UBERON:0003528!2.07e-09!34;UBERON:0008814!2.09e-09!15;UBERON:0002298!2.68e-09!8;UBERON:0000073!2.97e-09!94;UBERON:0001016!2.97e-09!94;UBERON:0001017!5.10e-09!82;UBERON:0000955!5.21e-09!69;UBERON:0006238!5.21e-09!69;UBERON:0002780!6.94e-09!41;UBERON:0001890!6.94e-09!41;UBERON:0006240!6.94e-09!41;UBERON:0000033!8.17e-09!123;UBERON:0003080!1.29e-08!42;UBERON:0000477!1.89e-08!286;UBERON:0004121!2.71e-08!169;UBERON:0001829!4.65e-08!2;UBERON:0000481!4.66e-08!347;UBERON:0002791!4.75e-08!33;UBERON:0002308!5.00e-08!9;UBERON:0000125!5.00e-08!9;UBERON:0000924!6.00e-08!173;UBERON:0006601!6.00e-08!173;UBERON:0001893!9.29e-08!34;UBERON:0000341!1.66e-07!2;UBERON:0000064!3.65e-07!219;UBERON:0000369!5.02e-07!4;UBERON:0002435!5.02e-07!4;UBERON:0000204!5.02e-07!4;UBERON:0010082!5.02e-07!4;UBERON:0009722!5.80e-07!11;UBERON:0007690!5.80e-07!11;UBERON:0001869!7.69e-07!32;UBERON:0009663!8.55e-07!7|ontology_enrichment_uberon_v019=UBERON:0001829;1.30e-37;2!UBERON:0002046;9.77e-33;5!UBERON:0001044;4.10e-28;6!UBERON:0003293;4.10e-28;6!UBERON:0003294;4.10e-28;6!UBERON:0010047;4.10e-28;6!UBERON:0003408;4.10e-28;6!UBERON:0000167;4.10e-28;6!UBERON:0001736;8.95e-20;1!UBERON:0001831;1.08e-19;1!UBERON:0001567;1.08e-19;1!UBERON:0002079;2.06e-19;1!UBERON:0001041;1.86e-12;14!UBERON:0004089;1.57e-10;2!UBERON:0002081;2.17e-10;2!UBERON:0000341;2.99e-10;2!UBERON:0000161;2.44e-09;19!UBERON:0000166;2.44e-09;19!UBERON:0004151;2.40e-07;3!UBERON:0007811;4.68e-07;52|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.30e-37,2;UBERON:0002046,1.15e-32,5;UBERON:0004117,1.15e-32,5;UBERON:0007689,1.15e-32,5;UBERON:0007123,1.15e-32,5;UBERON:0003091,1.15e-32,5;UBERON:0001044,4.10e-28,6;UBERON:0003293,4.10e-28,6;UBERON:0003294,4.10e-28,6;UBERON:0010047,4.10e-28,6;UBERON:0000167,4.10e-28,6;UBERON:0001736,8.95e-20,1;UBERON:0006298,8.95e-20,1;UBERON:0001831,1.08e-19,1;UBERON:0001567,1.08e-19,1;UBERON:0008801,1.08e-19,1;UBERON:0002079,1.88e-19,1;UBERON:0003408,3.59e-17,10;UBERON:0009722,2.88e-15,11;UBERON:0007690,2.88e-15,11;UBERON:0002530,6.31e-11,59;UBERON:0004089,1.57e-10,2;UBERON:0002081,2.07e-10,2;UBERON:0010227,2.07e-10,2;UBERON:0000341,2.99e-10,2;UBERON:0008814,1.40e-09,18;UBERON:0000166,3.84e-08,22;UBERON:0000153,2.02e-07,62;UBERON:0007811,2.02e-07,62;UBERON:0004151,2.32e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99843180798692,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.0631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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5332 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9059 | |||
|TSSclassifier=S | |||
|UniProt=B1AJW1 | |||
|association_with_transcript=54bp_to_ENST00000416836_5end | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_11_at_PLCB4_5end | |||
|id=chr20:9147059..9147072,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;9.77e-33;5!UBERON:0006298;8.95e-20;1!UBERON:0008801;1.08e-19;1!UBERON:0010227;2.06e-19;1!UBERON:0003056;2.19e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;3.91e-19;1!DOID:9119;3.91e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,2.71e-19,1;DOID:3112,3.25e-19,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.03e-40!115;UBERON:0001049!1.31e-13!57;UBERON:0005068!1.31e-13!57;UBERON:0006241!1.31e-13!57;UBERON:0007135!1.31e-13!57;UBERON:0003075!3.29e-12!86;UBERON:0007284!3.29e-12!86;UBERON:0002346!1.99e-11!90;UBERON:0002616!2.00e-11!59;UBERON:0000153!5.70e-11!129;UBERON:0007811!5.70e-11!129;UBERON:0002046!9.52e-11!5;UBERON:0004117!9.52e-11!5;UBERON:0007689!9.52e-11!5;UBERON:0007123!9.52e-11!5;UBERON:0003091!9.52e-11!5;UBERON:0005743!1.47e-09!86;UBERON:0002020!2.07e-09!34;UBERON:0003528!2.07e-09!34;UBERON:0008814!2.09e-09!15;UBERON:0002298!2.68e-09!8;UBERON:0000073!2.97e-09!94;UBERON:0001016!2.97e-09!94;UBERON:0001017!5.10e-09!82;UBERON:0000955!5.21e-09!69;UBERON:0006238!5.21e-09!69;UBERON:0002780!6.94e-09!41;UBERON:0001890!6.94e-09!41;UBERON:0006240!6.94e-09!41;UBERON:0000033!8.17e-09!123;UBERON:0003080!1.29e-08!42;UBERON:0000477!1.89e-08!286;UBERON:0004121!2.71e-08!169;UBERON:0001829!4.65e-08!2;UBERON:0000481!4.66e-08!347;UBERON:0002791!4.75e-08!33;UBERON:0002308!5.00e-08!9;UBERON:0000125!5.00e-08!9;UBERON:0000924!6.00e-08!173;UBERON:0006601!6.00e-08!173;UBERON:0001893!9.29e-08!34;UBERON:0000341!1.66e-07!2;UBERON:0000064!3.65e-07!219;UBERON:0000369!5.02e-07!4;UBERON:0002435!5.02e-07!4;UBERON:0000204!5.02e-07!4;UBERON:0010082!5.02e-07!4;UBERON:0009722!5.80e-07!11;UBERON:0007690!5.80e-07!11;UBERON:0001869!7.69e-07!32;UBERON:0009663!8.55e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.30e-37;2!UBERON:0002046;9.77e-33;5!UBERON:0001044;4.10e-28;6!UBERON:0003293;4.10e-28;6!UBERON:0003294;4.10e-28;6!UBERON:0010047;4.10e-28;6!UBERON:0003408;4.10e-28;6!UBERON:0000167;4.10e-28;6!UBERON:0001736;8.95e-20;1!UBERON:0001831;1.08e-19;1!UBERON:0001567;1.08e-19;1!UBERON:0002079;2.06e-19;1!UBERON:0001041;1.86e-12;14!UBERON:0004089;1.57e-10;2!UBERON:0002081;2.17e-10;2!UBERON:0000341;2.99e-10;2!UBERON:0000161;2.44e-09;19!UBERON:0000166;2.44e-09;19!UBERON:0004151;2.40e-07;3!UBERON:0007811;4.68e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.30e-37,2;UBERON:0002046,1.15e-32,5;UBERON:0004117,1.15e-32,5;UBERON:0007689,1.15e-32,5;UBERON:0007123,1.15e-32,5;UBERON:0003091,1.15e-32,5;UBERON:0001044,4.10e-28,6;UBERON:0003293,4.10e-28,6;UBERON:0003294,4.10e-28,6;UBERON:0010047,4.10e-28,6;UBERON:0000167,4.10e-28,6;UBERON:0001736,8.95e-20,1;UBERON:0006298,8.95e-20,1;UBERON:0001831,1.08e-19,1;UBERON:0001567,1.08e-19,1;UBERON:0008801,1.08e-19,1;UBERON:0002079,1.88e-19,1;UBERON:0003408,3.59e-17,10;UBERON:0009722,2.88e-15,11;UBERON:0007690,2.88e-15,11;UBERON:0002530,6.31e-11,59;UBERON:0004089,1.57e-10,2;UBERON:0002081,2.07e-10,2;UBERON:0010227,2.07e-10,2;UBERON:0000341,2.99e-10,2;UBERON:0008814,1.40e-09,18;UBERON:0000166,3.84e-08,22;UBERON:0000153,2.02e-07,62;UBERON:0007811,2.02e-07,62;UBERON:0004151,2.32e-07,3 | |||
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|short_description=p11@PLCB4 | |||
}} |
Revision as of 09:44, 12 September 2013
Short description: | p11@PLCB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_PLCB4_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 54bp_to_ENST00000416836_5end |
EntrezGene: | PLCB4 |
HGNC: | 9059 |
UniProt: | B1AJW1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.30e-37 | 2 |
thyroid gland | 1.15e-32 | 5 |
pharyngeal pouch | 1.15e-32 | 5 |
thyroid diverticulum | 1.15e-32 | 5 |
pharyngeal pouch 2 | 1.15e-32 | 5 |
thyroid primordium | 1.15e-32 | 5 |
saliva-secreting gland | 4.10e-28 | 6 |
gland of oral region | 4.10e-28 | 6 |
gland of foregut | 4.10e-28 | 6 |
oral gland | 4.10e-28 | 6 |
oral cavity | 4.10e-28 | 6 |
submandibular gland | 8.95e-20 | 1 |
submandibular gland primordium | 8.95e-20 | 1 |
parotid gland | 1.08e-19 | 1 |
cheek | 1.08e-19 | 1 |
parotid gland primordium | 1.08e-19 | 1 |
left cardiac atrium | 1.88e-19 | 1 |
gland of gut | 3.59e-17 | 10 |
entire pharyngeal arch endoderm | 2.88e-15 | 11 |
early pharyngeal endoderm | 2.88e-15 | 11 |
gland | 6.31e-11 | 59 |
midface | 1.57e-10 | 2 |
cardiac atrium | 2.07e-10 | 2 |
future cardiac atrium | 2.07e-10 | 2 |
throat | 2.99e-10 | 2 |
pharyngeal arch system | 1.40e-09 | 18 |
oral opening | 3.84e-08 | 22 |
anterior region of body | 2.02e-07 | 62 |
craniocervical region | 2.02e-07 | 62 |
cardiac chamber | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 2.71e-19 | 1 |
papillary adenocarcinoma | 3.25e-19 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.