FFCP PHASE1:Hg19::chr3:46395344..46395359,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=729230|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1603|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000465202_5end|coexpression_cluster_id=C300|description=CAGE_peak_2_at_CCR2_5end|id=chr3:46395344..46395359,+|ontology_enrichment_celltype=CL:0000738!1.90e-21!140;CL:0002087!4.74e-19!119;CL:0000037!8.19e-19!172;CL:0000566!8.19e-19!172;CL:0000542!2.04e-18!53;CL:0000051!2.04e-18!53;CL:0000838!1.43e-17!52;CL:0000988!1.11e-16!182;CL:0002032!2.11e-16!165;CL:0000837!2.11e-16!165;CL:0002031!4.67e-15!124;CL:0000791!7.68e-15!18;CL:0000789!7.68e-15!18;CL:0002420!7.68e-15!18;CL:0002419!7.68e-15!18;CL:0000790!7.68e-15!18;CL:0000625!2.49e-14!11;CL:0000236!4.41e-11!14;CL:0000084!1.09e-10!25;CL:0000827!1.09e-10!25;CL:0000945!1.99e-07!24;CL:0000826!1.99e-07!24|ontology_enrichment_celltype_v019=CL:0000791;8.07e-15;18!CL:0000789;8.07e-15;18!CL:0002419;8.07e-15;18!CL:0000236;2.65e-14;13!CL:0000625;5.48e-14;11!CL:0000542;3.76e-12;53!CL:0000945;2.17e-10;24!CL:0000084;5.87e-10;25!CL:0000784;8.97e-08;3|ontology_enrichment_celltype_v019_2=CL:0000542,8.96e-19,53;CL:0000051,8.96e-19,53;CL:0000838,1.47e-17,52;CL:0000236,3.64e-16,14;CL:0000791,8.44e-15,18;CL:0000789,8.44e-15,18;CL:0002420,8.44e-15,18;CL:0002419,8.44e-15,18;CL:0000790,8.44e-15,18;CL:0000625,5.21e-14,11;CL:0002087,6.04e-13,115;CL:0000738,2.09e-12,136;CL:0000037,1.49e-11,168;CL:0002031,3.60e-11,120;CL:0002032,8.16e-11,161;CL:0000837,8.16e-11,161;CL:0000988,1.75e-10,177;CL:0000945,2.30e-10,24;CL:0000826,2.30e-10,24;CL:0000084,6.05e-10,25;CL:0000827,6.05e-10,25;CL:0000784,8.25e-08,3|ontology_enrichment_development_v019=CL:0000790;8.07e-15;18!CL:0000051;3.76e-12;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!8.75e-24!115;UBERON:0000178!1.13e-11!15;UBERON:0000179!1.13e-11!15;UBERON:0000463!1.13e-11!15;UBERON:0002390!4.87e-08!102;UBERON:0003061!4.87e-08!102;UBERON:0002193!9.57e-08!112|ontology_enrichment_uberon_v019=UBERON:0000178;3.86e-12;15!UBERON:0000179;3.86e-12;15!UBERON:0000463;3.86e-12;15|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.36e-12,15;UBERON:0000179,3.36e-12,15;UBERON:0000463,3.36e-12,15;UBERON:0007023,6.58e-11,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29382842958246,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0,0,0.895661896959697,2.59114932815184,1.28787783817093,0.436194716338694,0,0.970336244751265,0,0,0,0,0,0.47296445977717,0,0,1.35426486594342,0,0.272906150057846,0,0,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0.632924774881769,0.211255286311942,0,0,1.01095768031846,0.450530678524519,1.76798145366788,0,0,0,10.5597746676794,4.36910889009705,2.66852776159066,5.9742231159311,4.80475184443215,8.04653415936277,5.2883589822789,5.72432252721218,1.1384259382189,0,0.382273228125229,0,0.560508562981536,0,0.786839080455332,0,1.23360899399706,4.68122187093899,0,0,0,39.5507121942366,5.30290633454707,2.87994062958707,6.49929273036037,19.8541545574796,43.4398220849993,47.193678621255,44.7687028813074,36.2253857168816,0,0,0,26.8543142193232,3.44898444241729,5.49803912772208,12.1449452169361,6.68987370080603,2.60433381542567,5.70271226669025,5.57127940587759,6.14335733541208,7.49584359314075,7.57687206540854,3.28451198768419,0.80642697289893,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,0,0,0.324547393654683,0,0,6.20075623193889,2.85997455390064,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.215627574859517,0,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,8.11916174771471,3.82318603571188,3.98753031021914,9.52927101831156,6.17043409629291,5.83625980073446,4.86028293514303,3.17250070517708,0,0,0,1.11481905075431,0,0,0.318852545457645,0,0,0,0,0,0.684704037099577,0,0,0,4.65705417800729,3.02699560786571,0,0,4.30137070031841,5.14455048152557,4.67177596793344,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.71623345421307,0,0,0,0,0,0,0,0.597743964753209,1.93398740871803,0,0,4.18488338567636,0,0,0,4.60415133204185,0.197286811273867,2.3948309234694,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61595542857974,0,0,0,0,2.55200927785536,0.0915975934018623,0.533034776018635,0,0,2.99181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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=729230 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1603 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000465202_5end | |||
|coexpression_cluster_id=C300 | |||
|description=CAGE_peak_2_at_CCR2_5end | |||
|id=chr3:46395344..46395359,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.90e-21!140;CL:0002087!4.74e-19!119;CL:0000037!8.19e-19!172;CL:0000566!8.19e-19!172;CL:0000542!2.04e-18!53;CL:0000051!2.04e-18!53;CL:0000838!1.43e-17!52;CL:0000988!1.11e-16!182;CL:0002032!2.11e-16!165;CL:0000837!2.11e-16!165;CL:0002031!4.67e-15!124;CL:0000791!7.68e-15!18;CL:0000789!7.68e-15!18;CL:0002420!7.68e-15!18;CL:0002419!7.68e-15!18;CL:0000790!7.68e-15!18;CL:0000625!2.49e-14!11;CL:0000236!4.41e-11!14;CL:0000084!1.09e-10!25;CL:0000827!1.09e-10!25;CL:0000945!1.99e-07!24;CL:0000826!1.99e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000791;8.07e-15;18!CL:0000789;8.07e-15;18!CL:0002419;8.07e-15;18!CL:0000236;2.65e-14;13!CL:0000625;5.48e-14;11!CL:0000542;3.76e-12;53!CL:0000945;2.17e-10;24!CL:0000084;5.87e-10;25!CL:0000784;8.97e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,8.96e-19,53;CL:0000051,8.96e-19,53;CL:0000838,1.47e-17,52;CL:0000236,3.64e-16,14;CL:0000791,8.44e-15,18;CL:0000789,8.44e-15,18;CL:0002420,8.44e-15,18;CL:0002419,8.44e-15,18;CL:0000790,8.44e-15,18;CL:0000625,5.21e-14,11;CL:0002087,6.04e-13,115;CL:0000738,2.09e-12,136;CL:0000037,1.49e-11,168;CL:0002031,3.60e-11,120;CL:0002032,8.16e-11,161;CL:0000837,8.16e-11,161;CL:0000988,1.75e-10,177;CL:0000945,2.30e-10,24;CL:0000826,2.30e-10,24;CL:0000084,6.05e-10,25;CL:0000827,6.05e-10,25;CL:0000784,8.25e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;8.07e-15;18!CL:0000051;3.76e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.75e-24!115;UBERON:0000178!1.13e-11!15;UBERON:0000179!1.13e-11!15;UBERON:0000463!1.13e-11!15;UBERON:0002390!4.87e-08!102;UBERON:0003061!4.87e-08!102;UBERON:0002193!9.57e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.86e-12;15!UBERON:0000179;3.86e-12;15!UBERON:0000463;3.86e-12;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.36e-12,15;UBERON:0000179,3.36e-12,15;UBERON:0000463,3.36e-12,15;UBERON:0007023,6.58e-11,114 | |||
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|short_description=p2@CCR2 | |||
}} |
Revision as of 00:19, 13 September 2013
Short description: | p2@CCR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CCR2_5end |
Coexpression cluster: | C300_CD4_CD8_NK_Natural_blood_mycosis_Basophils |
Association with transcript: | 0bp_to_ENST00000465202_5end |
EntrezGene: | CCR2 |
HGNC: | 1603 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 8.96e-19 | 53 |
common lymphoid progenitor | 8.96e-19 | 53 |
lymphoid lineage restricted progenitor cell | 1.47e-17 | 52 |
B cell | 3.64e-16 | 14 |
mature alpha-beta T cell | 8.44e-15 | 18 |
alpha-beta T cell | 8.44e-15 | 18 |
immature T cell | 8.44e-15 | 18 |
mature T cell | 8.44e-15 | 18 |
immature alpha-beta T cell | 8.44e-15 | 18 |
CD8-positive, alpha-beta T cell | 5.21e-14 | 11 |
nongranular leukocyte | 6.04e-13 | 115 |
leukocyte | 2.09e-12 | 136 |
hematopoietic stem cell | 1.49e-11 | 168 |
hematopoietic lineage restricted progenitor cell | 3.60e-11 | 120 |
hematopoietic oligopotent progenitor cell | 8.16e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.16e-11 | 161 |
hematopoietic cell | 1.75e-10 | 177 |
lymphocyte of B lineage | 2.30e-10 | 24 |
pro-B cell | 2.30e-10 | 24 |
T cell | 6.05e-10 | 25 |
pro-T cell | 6.05e-10 | 25 |
plasmacytoid dendritic cell | 8.25e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 3.36e-12 | 15 |
haemolymphatic fluid | 3.36e-12 | 15 |
organism substance | 3.36e-12 | 15 |
adult organism | 6.58e-11 | 114 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.