FFCP PHASE1:Hg19::chr3:107602030..107602044,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=285205|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=|TSSclassifier=W|UniProt=|association_with_transcript=-7bp_to_NR_015394,uc003dws.3_5end|coexpression_cluster_id=C100|description=CAGE_peak_1_at_LOC285205_5end|id=chr3:107602030..107602044,+|ontology_enrichment_celltype=CL:0002139!8.56e-12!24;CL:0000115!1.90e-11!35;CL:0005020!3.29e-11!6;CL:0002138!3.29e-11!6;CL:0005022!3.29e-11!6;CL:0002078!1.24e-08!44;CL:0002545!1.48e-08!2|ontology_enrichment_celltype_v019=CL:0002138;1.89e-28;6!CL:0002139;1.42e-15;24!CL:0002144;2.70e-15;3!CL:0000115;5.43e-15;36!CL:0002078;6.23e-10;45!CL:0000213;3.75e-07;58!CL:0000215;3.75e-07;58|ontology_enrichment_celltype_v019_2=CL:0005020,1.64e-28,6;CL:0002138,1.64e-28,6;CL:0005022,1.64e-28,6;CL:0000115,7.55e-18,36;CL:0002139,1.37e-15,24;CL:0002144,2.80e-15,3;CL:0002078,4.21e-14,45;CL:0000213,9.79e-11,58;CL:0000215,9.79e-11,58|ontology_enrichment_development_v019=CL:0005022;1.89e-28;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002465!4.85e-14!10;UBERON:0007023!4.85e-10!115;UBERON:0000341!9.70e-09!2;UBERON:0005800!1.48e-08!2;UBERON:0001515!1.48e-08!2;UBERON:0001473!2.12e-08!8;UBERON:0004536!2.12e-08!8;UBERON:0006558!2.12e-08!8;UBERON:0000477!5.70e-08!286;UBERON:0000055!9.52e-07!69|ontology_enrichment_uberon_v019=UBERON:0002465;3.12e-26;10!UBERON:0001473;1.99e-21;8!UBERON:0004536;1.99e-21;8!UBERON:0006558;1.99e-21;8!UBERON:0010523;2.70e-15;3!UBERON:0001915;2.70e-15;3!UBERON:0001982;2.70e-15;3!UBERON:0001723;5.48e-15;3!UBERON:0001033;5.48e-15;3!UBERON:0000029;1.07e-11;1!UBERON:0002405;1.11e-09;27!UBERON:0000055;4.97e-08;65|ontology_enrichment_uberon_v019_2=UBERON:0002465,2.81e-26,10;UBERON:0001473,1.79e-21,8;UBERON:0004536,1.79e-21,8;UBERON:0006558,1.79e-21,8;UBERON:0010523,2.80e-15,3;UBERON:0001915,2.80e-15,3;UBERON:0001982,2.80e-15,3;UBERON:0001723,7.53e-15,3;UBERON:0001033,7.53e-15,3;UBERON:0010056,7.53e-15,3;UBERON:0000029,1.07e-11,1;UBERON:0000055,5.04e-09,68;UBERON:0002049,9.59e-08,78;UBERON:0007798,9.59e-08,78|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,1.33888245105868,3.22263453687318,0,2.19655851793353,0.367663080345869,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.35212370148725,1.85194205030644,7.22965778491473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,1.53036380815245,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,1.82631744101899,0,0,0,0,27.7817006629819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0.905777061400041,0,0.218559560503957,0,0,0,0,0,1.2679671827502,0,0.0939839179798536,0.128915775947154,0,0,0,0,0.730336388246517,0.917458566809082,0,0,0,0.872701380680755,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0.426467963801962,1.42838658878244,0,0.0620747142958579,0,0.381882949668989,2.42540626749863,1.08858373948481,2.39563310759697,0.5388164241167,0.215166616178029,0,0,0,0,0,0,0.366724332548599,0,0,1.61019034872821,0|short_description=p1@LOC285205}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=285205 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-7bp_to_NR_015394,uc003dws.3_5end | |||
|coexpression_cluster_id=C100 | |||
|description=CAGE_peak_1_at_LOC285205_5end | |||
|id=chr3:107602030..107602044,+ | |||
|ontology_enrichment_celltype=CL:0002139!8.56e-12!24;CL:0000115!1.90e-11!35;CL:0005020!3.29e-11!6;CL:0002138!3.29e-11!6;CL:0005022!3.29e-11!6;CL:0002078!1.24e-08!44;CL:0002545!1.48e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002138;1.89e-28;6!CL:0002139;1.42e-15;24!CL:0002144;2.70e-15;3!CL:0000115;5.43e-15;36!CL:0002078;6.23e-10;45!CL:0000213;3.75e-07;58!CL:0000215;3.75e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.64e-28,6;CL:0002138,1.64e-28,6;CL:0005022,1.64e-28,6;CL:0000115,7.55e-18,36;CL:0002139,1.37e-15,24;CL:0002144,2.80e-15,3;CL:0002078,4.21e-14,45;CL:0000213,9.79e-11,58;CL:0000215,9.79e-11,58 | |||
|ontology_enrichment_development_v019=CL:0005022;1.89e-28;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!4.85e-14!10;UBERON:0007023!4.85e-10!115;UBERON:0000341!9.70e-09!2;UBERON:0005800!1.48e-08!2;UBERON:0001515!1.48e-08!2;UBERON:0001473!2.12e-08!8;UBERON:0004536!2.12e-08!8;UBERON:0006558!2.12e-08!8;UBERON:0000477!5.70e-08!286;UBERON:0000055!9.52e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002465;3.12e-26;10!UBERON:0001473;1.99e-21;8!UBERON:0004536;1.99e-21;8!UBERON:0006558;1.99e-21;8!UBERON:0010523;2.70e-15;3!UBERON:0001915;2.70e-15;3!UBERON:0001982;2.70e-15;3!UBERON:0001723;5.48e-15;3!UBERON:0001033;5.48e-15;3!UBERON:0000029;1.07e-11;1!UBERON:0002405;1.11e-09;27!UBERON:0000055;4.97e-08;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,2.81e-26,10;UBERON:0001473,1.79e-21,8;UBERON:0004536,1.79e-21,8;UBERON:0006558,1.79e-21,8;UBERON:0010523,2.80e-15,3;UBERON:0001915,2.80e-15,3;UBERON:0001982,2.80e-15,3;UBERON:0001723,7.53e-15,3;UBERON:0001033,7.53e-15,3;UBERON:0010056,7.53e-15,3;UBERON:0000029,1.07e-11,1;UBERON:0000055,5.04e-09,68;UBERON:0002049,9.59e-08,78;UBERON:0007798,9.59e-08,78 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,1.33888245105868,3.22263453687318,0,2.19655851793353,0.367663080345869,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.35212370148725,1.85194205030644,7.22965778491473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,1.53036380815245,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,1.82631744101899,0,0,0,0,27.7817006629819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0.905777061400041,0,0.218559560503957,0,0,0,0,0,1.2679671827502,0,0.0939839179798536,0.128915775947154,0,0,0,0,0.730336388246517,0.917458566809082,0,0,0,0.872701380680755,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0.426467963801962,1.42838658878244,0,0.0620747142958579,0,0.381882949668989,2.42540626749863,1.08858373948481,2.39563310759697,0.5388164241167,0.215166616178029,0,0,0,0,0,0,0.366724332548599,0,0,1.61019034872821,0 | |||
|short_description=p1@LOC285205 | |||
}} |
Revision as of 20:38, 12 September 2013
Short description: | p1@LOC285205 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC285205_5end |
Coexpression cluster: | C100_rhabdomyosarcoma_gastric_pineal_Wilms_cervical_mesodermal_endometrial |
Association with transcript: | -7bp_to_NR_015394, uc003dws.3_5end |
EntrezGene: | LOC285205 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.64e-28 | 6 |
endothelial cell of lymphatic vessel | 1.64e-28 | 6 |
vascular lymphangioblast | 1.64e-28 | 6 |
endothelial cell | 7.55e-18 | 36 |
endothelial cell of vascular tree | 1.37e-15 | 24 |
capillary endothelial cell | 2.80e-15 | 3 |
meso-epithelial cell | 4.21e-14 | 45 |
lining cell | 9.79e-11 | 58 |
barrier cell | 9.79e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 2.81e-26 | 10 |
lymphatic vessel | 1.79e-21 | 8 |
lymph vasculature | 1.79e-21 | 8 |
lymphatic part of lymphoid system | 1.79e-21 | 8 |
microcirculatory vessel | 2.80e-15 | 3 |
endothelium of capillary | 2.80e-15 | 3 |
capillary | 2.80e-15 | 3 |
tongue | 7.53e-15 | 3 |
gustatory system | 7.53e-15 | 3 |
future tongue | 7.53e-15 | 3 |
lymph node | 1.07e-11 | 1 |
vessel | 5.04e-09 | 68 |
vasculature | 9.59e-08 | 78 |
vascular system | 9.59e-08 | 78 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.