FFCP PHASE1:Hg19::chr4:86749020..86749042,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=83478|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25361|TSSclassifier=S|UniProt=D6RCP5|association_with_transcript=-3bp_to_ENST00000514229,uc010ikf.2_5end|coexpression_cluster_id=C1945|description=CAGE_peak_12_at_ARHGAP24_5end|id=chr4:86749020..86749042,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000064;3.84e-10;3!CL:0000067;3.84e-10;3!CL:0005012;3.84e-10;3!CL:0002304;3.84e-10;3|ontology_enrichment_celltype_v019_2=CL:0000064,3.99e-10,3;CL:0000067,3.99e-10,3;CL:0005012,3.99e-10,3;CL:0002304,3.99e-10,3|ontology_enrichment_development_v019=UBERON:0003104;4.41e-08;31|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000481!2.81e-09!347;UBERON:0007625!1.43e-07!11;UBERON:0000475!5.13e-07!365|ontology_enrichment_uberon_v019=UBERON:0007625;2.67e-13;11!UBERON:0000488;8.97e-13;4!UBERON:0000020;9.45e-12;23!UBERON:0001032;3.55e-11;24!UBERON:0004456;3.55e-11;24!UBERON:0000970;4.38e-11;20!UBERON:0001456;1.28e-10;21!UBERON:0002104;1.78e-10;21!UBERON:0001778;3.84e-10;3!UBERON:0001775;3.84e-10;3!UBERON:0000019;2.37e-09;19!UBERON:0000047;2.37e-09;19!UBERON:0004088;2.37e-09;19!UBERON:0010230;2.37e-09;19!UBERON:0002203;1.58e-08;6!UBERON:0001768;1.58e-08;6!UBERON:0002200;1.58e-08;6!UBERON:0010371;8.46e-08;31!UBERON:0005090;2.64e-07;2!UBERON:0001630;2.64e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0007625,2.16e-13,11;UBERON:0000488,8.12e-13,4;UBERON:0000020,3.86e-11,24;UBERON:0001032,3.86e-11,24;UBERON:0004456,3.86e-11,24;UBERON:0000970,1.78e-10,21;UBERON:0002104,1.78e-10,21;UBERON:0001778,3.99e-10,3;UBERON:0001775,3.99e-10,3;UBERON:0001456,4.69e-10,22;UBERON:0000019,8.75e-09,20;UBERON:0000047,8.75e-09,20;UBERON:0010312,8.75e-09,20;UBERON:0004088,8.75e-09,20;UBERON:0010230,8.75e-09,20;UBERON:0003072,8.75e-09,20;UBERON:0004128,8.75e-09,20;UBERON:0003071,8.75e-09,20;UBERON:0002203,1.48e-08,6;UBERON:0001768,1.48e-08,6;UBERON:0002200,1.48e-08,6;UBERON:0005085,3.91e-08,31;UBERON:0005090,1.46e-07,2;UBERON:0001630,1.46e-07,2|phase1_expression=0.54503513781167,0.642301571672949,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.369363174230364,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0,0,0,4.34860158954712,1.77383517970051,1.14185221401064,2.22664428346111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.662045904066094,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0.23486899728753,0.323745888736263,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0.30648779579902,0,0.113432183160021,0,0.213557388818567,0.423863802319124,0,0,0,1.11670113798954,0.506328996723799,0.292311015483596,0.252433774244115,0.368199594569197,0,1.06502877754984,0.302256294682921,0.169560592310488,0,0,0,0,0.132529768321485,0,0,0,0,0,1.92972281457866,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,1.54411029268673,0,0,0,0,0,0,0,2.20267769452646,0.821860859650752,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0,0,0,1.86156681609409,1.04007436911366,0,0,0,0,0,0,0,0,0,1.50719688529793,1.74306691720059,0.799783929456456,0,0,0,0.718874566474748,1.14861935834114,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,2.07970861530807,0.713715955188647,0.315404830067869,0.234282829985426,0.601892199455438,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.744323423456331,0,0.561320188866147,0.256278298511402,0,0,0,0,0.355123450626254,0,0,0,0.362578348774867,0,0.184161977871793,0,0,0,0,1.92538342761037,0,0,1.05551628892876,0,0,0,0,0.541892875087706,0,0.254876273045038,1.66215201785745,0.223874754722178,0,0,1.79515087581472,0.656029291399411,3.57916234130733,0.9273691048295,0,0,0,0,0,0.676695028044854,0.308097234229289,1.22802939780904,0.137836572484531,0.322260734604821,0.435050081742686,0.340906509664404,0.979352392114111,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,3.95572084034114,0,0,0,0,0,0,0,0,0.779160935160341,0,0,2.78947183551498,0,0,0,0,0.311039587661807,0.269605053441981,0,0,0.493217028184668,0,0,0,0,0,0,0,0.724999575434793,0,0.762760950878299,0,0,0,0.520874984799877,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,3.49660473756833,0,4.89698424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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=83478 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25361 | |||
|TSSclassifier=S | |||
|UniProt=D6RCP5 | |||
|association_with_transcript=-3bp_to_ENST00000514229,uc010ikf.2_5end | |||
|coexpression_cluster_id=C1945 | |||
|description=CAGE_peak_12_at_ARHGAP24_5end | |||
|id=chr4:86749020..86749042,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;3.84e-10;3!CL:0000067;3.84e-10;3!CL:0005012;3.84e-10;3!CL:0002304;3.84e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,3.99e-10,3;CL:0000067,3.99e-10,3;CL:0005012,3.99e-10,3;CL:0002304,3.99e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0003104;4.41e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!2.81e-09!347;UBERON:0007625!1.43e-07!11;UBERON:0000475!5.13e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;2.67e-13;11!UBERON:0000488;8.97e-13;4!UBERON:0000020;9.45e-12;23!UBERON:0001032;3.55e-11;24!UBERON:0004456;3.55e-11;24!UBERON:0000970;4.38e-11;20!UBERON:0001456;1.28e-10;21!UBERON:0002104;1.78e-10;21!UBERON:0001778;3.84e-10;3!UBERON:0001775;3.84e-10;3!UBERON:0000019;2.37e-09;19!UBERON:0000047;2.37e-09;19!UBERON:0004088;2.37e-09;19!UBERON:0010230;2.37e-09;19!UBERON:0002203;1.58e-08;6!UBERON:0001768;1.58e-08;6!UBERON:0002200;1.58e-08;6!UBERON:0010371;8.46e-08;31!UBERON:0005090;2.64e-07;2!UBERON:0001630;2.64e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,2.16e-13,11;UBERON:0000488,8.12e-13,4;UBERON:0000020,3.86e-11,24;UBERON:0001032,3.86e-11,24;UBERON:0004456,3.86e-11,24;UBERON:0000970,1.78e-10,21;UBERON:0002104,1.78e-10,21;UBERON:0001778,3.99e-10,3;UBERON:0001775,3.99e-10,3;UBERON:0001456,4.69e-10,22;UBERON:0000019,8.75e-09,20;UBERON:0000047,8.75e-09,20;UBERON:0010312,8.75e-09,20;UBERON:0004088,8.75e-09,20;UBERON:0010230,8.75e-09,20;UBERON:0003072,8.75e-09,20;UBERON:0004128,8.75e-09,20;UBERON:0003071,8.75e-09,20;UBERON:0002203,1.48e-08,6;UBERON:0001768,1.48e-08,6;UBERON:0002200,1.48e-08,6;UBERON:0005085,3.91e-08,31;UBERON:0005090,1.46e-07,2;UBERON:0001630,1.46e-07,2 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.369363174230364,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0,0,0,4.34860158954712,1.77383517970051,1.14185221401064,2.22664428346111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.662045904066094,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0.23486899728753,0.323745888736263,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0.30648779579902,0,0.113432183160021,0,0.213557388818567,0.423863802319124,0,0,0,1.11670113798954,0.506328996723799,0.292311015483596,0.252433774244115,0.368199594569197,0,1.06502877754984,0.302256294682921,0.169560592310488,0,0,0,0,0.132529768321485,0,0,0,0,0,1.92972281457866,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,1.54411029268673,0,0,0,0,0,0,0,2.20267769452646,0.821860859650752,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0,0,0,1.86156681609409,1.04007436911366,0,0,0,0,0,0,0,0,0,1.50719688529793,1.74306691720059,0.799783929456456,0,0,0,0.718874566474748,1.14861935834114,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,2.07970861530807,0.713715955188647,0.315404830067869,0.234282829985426,0.601892199455438,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.744323423456331,0,0.561320188866147,0.256278298511402,0,0,0,0,0.355123450626254,0,0,0,0.362578348774867,0,0.184161977871793,0,0,0,0,1.92538342761037,0,0,1.05551628892876,0,0,0,0,0.541892875087706,0,0.254876273045038,1.66215201785745,0.223874754722178,0,0,1.79515087581472,0.656029291399411,3.57916234130733,0.9273691048295,0,0,0,0,0,0.676695028044854,0.308097234229289,1.22802939780904,0.137836572484531,0.322260734604821,0.435050081742686,0.340906509664404,0.979352392114111,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,3.95572084034114,0,0,0,0,0,0,0,0,0.779160935160341,0,0,2.78947183551498,0,0,0,0,0.311039587661807,0.269605053441981,0,0,0.493217028184668,0,0,0,0,0,0,0,0.724999575434793,0,0.762760950878299,0,0,0,0.520874984799877,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,3.49660473756833,0,4.89698424477443,0,0,0,0.530745387020035,0,0,0,0,0.134802265961354,2.40773294189637,0,0,0,0,0,2.41981432097328,0,0.252746318513952,0.150323419414493,0,0.664653872707185,0.330991955875499,0,0,0.284609546029793,0.554698692052555,0.347119476670262,0,0,1.57254001417827,0,0,0,0,0.0969890164884194,0,1.58186518546373,0,0,0.0633107959558787,0,0.721429382263803,0.426905989478705,0.39961921916426,1.29681375438695,15.4624404823986,0,0.14405479798815,0,0,0,0,0,0,0,0,0,3.0083580899397,0,0.279282401272254,1.14580212005842,0,0,0.429226048136571,0.223171457441873,1.2764859772478,0,1.16495949527454,0,0,0,1.08270229666224,0,0,0.136203406111576,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0.182248669974074,0,12.8453302897693,6.76664186941476,0.211200673038813,0,0,0.714695326373367,0.662091970365432,0,0,0,0.979762080328227,0,0,0,0,0.293104467356165,0,0.129282956361551,0.13223260174269,0.342173675768659,0,1.28144895081234,0.471612915298998,0,0,0,0,0,0.544017803369474,2.7575888342497,0.919036730290385,0.327872630709804,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,1.51522404220071,2.0125432140206,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.214821114084977,0,0,0,1.37358282073117,1.01024846629776,6.30924491143255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0.318004350653419,0,0.80057074828547,0,0.3062454773532,0.128458450192919,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,2.66967466827017,0,0,0,0.20170506870352,2.34454203369928,0,1.14640342257068,0.147856086217045,0.202612753855184,0,0,0,0,2.74128883428591,0.992422356778588,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,5.14464028312255,0.40781839786099,0,0,0.111231401892069,0.078493092850514,0.157115589916002,0,0,1.72742072974897,0.47775168788705,1.00067161847319,0,0,0.173858272302579,0,0,0,0,0,0,0,0.423387050190929,0.68732060563215,0,0,1.78968690876468,0.098150233615243,0,1.94228651156368,2.25858175083743,2.3196288626764,1.94284397223656,0,0.198950775161368,0,0,0,1.50962843566674,0.3858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| |||
|short_description=p12@ARHGAP24 | |||
}} |
Revision as of 12:08, 13 September 2013
Short description: | p12@ARHGAP24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_ARHGAP24_5end |
Coexpression cluster: | C1945_gastric_kidney_throat_chronic_acute_diaphragm_temporal |
Association with transcript: | -3bp_to_ENST00000514229, uc010ikf.2_5end |
EntrezGene: | ARHGAP24 |
HGNC: | 25361 |
UniProt: | D6RCP5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 3.99e-10 | 3 |
ciliated epithelial cell | 3.99e-10 | 3 |
multi-ciliated epithelial cell | 3.99e-10 | 3 |
non-pigmented ciliary epithelial cell | 3.99e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 2.16e-13 | 11 |
atypical epithelium | 8.12e-13 | 4 |
sense organ | 3.86e-11 | 24 |
sensory system | 3.86e-11 | 24 |
entire sense organ system | 3.86e-11 | 24 |
eye | 1.78e-10 | 21 |
visual system | 1.78e-10 | 21 |
ciliary epithelium | 3.99e-10 | 3 |
ciliary body | 3.99e-10 | 3 |
face | 4.69e-10 | 22 |
camera-type eye | 8.75e-09 | 20 |
simple eye | 8.75e-09 | 20 |
immature eye | 8.75e-09 | 20 |
ocular region | 8.75e-09 | 20 |
eyeball of camera-type eye | 8.75e-09 | 20 |
optic cup | 8.75e-09 | 20 |
optic vesicle | 8.75e-09 | 20 |
eye primordium | 8.75e-09 | 20 |
vasculature of eye | 1.48e-08 | 6 |
uvea | 1.48e-08 | 6 |
vasculature of head | 1.48e-08 | 6 |
ectodermal placode | 3.91e-08 | 31 |
muscle structure | 1.46e-07 | 2 |
muscle organ | 1.46e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.