FFCP PHASE1:Hg19::chr6:138412531..138412579,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C748|description=CAGE_peak_at_chr6:138412531..138412579,-|id=chr6:138412531..138412579,-|ontology_enrichment_celltype=CL:0000066!2.43e-23!254;CL:0002076!2.57e-15!43;CL:0000223!2.48e-11!59;CL:0000220!4.39e-10!246;CL:0002321!5.42e-10!248;CL:0002251!2.88e-08!21;CL:0000076!1.50e-07!62|ontology_enrichment_celltype_v019=CL:0000622;2.73e-17;5!CL:0000154;2.41e-14;6!CL:0002159;1.67e-13;14!CL:0002076;1.92e-13;42!CL:0002251;8.66e-12;20!CL:0002623;2.22e-11;3!CL:0002621;3.03e-10;3!CL:0000150;1.99e-09;9!CL:0000362;7.87e-09;9!CL:0002077;5.49e-08;34!CL:0000317;1.28e-07;2!CL:1000448;1.28e-07;2!CL:0002308;1.28e-07;2!CL:0002140;1.28e-07;2|ontology_enrichment_celltype_v019_2=CL:0002076,5.85e-18,42;CL:0000622,4.13e-17,5;CL:0000154,3.39e-14,6;CL:0002159,1.88e-13,14;CL:0000223,1.91e-13,58;CL:0002251,1.15e-11,20;CL:0002623,2.40e-11,3;CL:0000066,3.73e-11,253;CL:0002621,4.14e-10,3;CL:0000150,2.48e-09,9;CL:0002077,6.78e-09,34;CL:0000362,1.28e-08,9;CL:0000317,1.78e-07,2;CL:1000448,1.78e-07,2;CL:0002308,1.78e-07,2;CL:0002140,1.78e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!2.08e-10!143;DOID:305!2.76e-10!106;DOID:14566!4.75e-07!239|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.92e-13!169;UBERON:0000925!1.92e-13!169;UBERON:0006595!1.92e-13!169;UBERON:0001004!9.84e-12!72;UBERON:0001007!1.31e-10!155;UBERON:0001555!1.31e-10!155;UBERON:0007026!1.31e-10!155;UBERON:0004921!6.71e-09!129;UBERON:0004185!6.71e-09!129;UBERON:0000065!1.14e-08!53;UBERON:0000077!3.67e-08!130;UBERON:0000161!1.39e-07!35;UBERON:0008947!4.34e-07!38;UBERON:0003258!4.34e-07!38;UBERON:0000915!6.76e-07!52|ontology_enrichment_uberon_v019=UBERON:0001949;3.03e-10;3!UBERON:0000165;4.58e-08;28!UBERON:0000161;1.23e-07;19!UBERON:0000166;1.23e-07;19!UBERON:0002419;1.28e-07;2!UBERON:0007771;1.28e-07;2!UBERON:0003297;1.28e-07;2!UBERON:0001821;1.28e-07;2!UBERON:0003487;1.28e-07;2!UBERON:0001820;1.28e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000166,1.01e-10,22;UBERON:0001949,4.14e-10,3;UBERON:0000161,4.95e-09,36;UBERON:0001004,1.83e-08,74;UBERON:0003102,2.47e-08,99;UBERON:0004119,7.32e-08,160;UBERON:0000925,7.32e-08,160;UBERON:0006595,7.32e-08,160;UBERON:0000165,1.03e-07,29;UBERON:0000930,1.03e-07,29;UBERON:0002419,1.78e-07,2;UBERON:0007771,1.78e-07,2;UBERON:0003297,1.78e-07,2;UBERON:0001821,1.78e-07,2;UBERON:0003487,1.78e-07,2;UBERON:0001820,1.78e-07,2;UBERON:0005089,1.78e-07,2;UBERON:0005088,1.78e-07,2;UBERON:0000033,4.72e-07,56|phase1_expression=0.363356758541113,0.642301571672949,0.140954404095971,1.0007329835313,0.893922188854576,0,0,0,0,0.245733936501509,0,0.436882744260345,0.527533956456907,0.123766352960047,0.331397375727916,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0.408001382488506,0,0,0.136874425072884,0,0.0764134057479513,0,0,0,0,0,1.83884244895785,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.434539556882471,0,0.486634870302636,0.189069634328136,0,0.43917392846563,0,0,1.85392221392215,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0,0.550236083880135,0.208994966536811,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,0,0,2.18047026071267,0.496971951695318,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0.605429710579726,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0.179389635688862,0,0.423863802319124,0,0,0,0.18611685633159,0,0,0.252433774244115,0.0920498986422993,0.161646056818812,0,0,0,2.70565194428616,1.09098448236334,1.43402297694502,0.121973706129595,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0.709840800239063,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0,1.07865046528132,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0,2.74375713521564,1.1240175325762,1.10581869652794,0.833296006426766,0,0,1.44331342025273,0,0,0,0,0.380508304469197,1.58040879591855,0.858486162094873,0,0,0,1.87467667973554,2.01578553838631,0.567100388969546,0.626909658919938,0.581267877027924,1.91691339582606,0,0,0,0,0,0,0.381988425558278,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0.602878754119172,0,0.499864955910285,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0,1.07057393278297,0.157702415033935,0.234282829985426,0,0,0,0,0,0.173767228936166,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581198,0,0,2.03448089157869,0,0,0|short_description=p@chr6:138412531..138412579,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C748 | |||
|description=CAGE_peak_at_chr6:138412531..138412579,- | |||
|id=chr6:138412531..138412579,- | |||
|ontology_enrichment_celltype=CL:0000066!2.43e-23!254;CL:0002076!2.57e-15!43;CL:0000223!2.48e-11!59;CL:0000220!4.39e-10!246;CL:0002321!5.42e-10!248;CL:0002251!2.88e-08!21;CL:0000076!1.50e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000622;2.73e-17;5!CL:0000154;2.41e-14;6!CL:0002159;1.67e-13;14!CL:0002076;1.92e-13;42!CL:0002251;8.66e-12;20!CL:0002623;2.22e-11;3!CL:0002621;3.03e-10;3!CL:0000150;1.99e-09;9!CL:0000362;7.87e-09;9!CL:0002077;5.49e-08;34!CL:0000317;1.28e-07;2!CL:1000448;1.28e-07;2!CL:0002308;1.28e-07;2!CL:0002140;1.28e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,5.85e-18,42;CL:0000622,4.13e-17,5;CL:0000154,3.39e-14,6;CL:0002159,1.88e-13,14;CL:0000223,1.91e-13,58;CL:0002251,1.15e-11,20;CL:0002623,2.40e-11,3;CL:0000066,3.73e-11,253;CL:0002621,4.14e-10,3;CL:0000150,2.48e-09,9;CL:0002077,6.78e-09,34;CL:0000362,1.28e-08,9;CL:0000317,1.78e-07,2;CL:1000448,1.78e-07,2;CL:0002308,1.78e-07,2;CL:0002140,1.78e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.08e-10!143;DOID:305!2.76e-10!106;DOID:14566!4.75e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.92e-13!169;UBERON:0000925!1.92e-13!169;UBERON:0006595!1.92e-13!169;UBERON:0001004!9.84e-12!72;UBERON:0001007!1.31e-10!155;UBERON:0001555!1.31e-10!155;UBERON:0007026!1.31e-10!155;UBERON:0004921!6.71e-09!129;UBERON:0004185!6.71e-09!129;UBERON:0000065!1.14e-08!53;UBERON:0000077!3.67e-08!130;UBERON:0000161!1.39e-07!35;UBERON:0008947!4.34e-07!38;UBERON:0003258!4.34e-07!38;UBERON:0000915!6.76e-07!52 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;3.03e-10;3!UBERON:0000165;4.58e-08;28!UBERON:0000161;1.23e-07;19!UBERON:0000166;1.23e-07;19!UBERON:0002419;1.28e-07;2!UBERON:0007771;1.28e-07;2!UBERON:0003297;1.28e-07;2!UBERON:0001821;1.28e-07;2!UBERON:0003487;1.28e-07;2!UBERON:0001820;1.28e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,1.01e-10,22;UBERON:0001949,4.14e-10,3;UBERON:0000161,4.95e-09,36;UBERON:0001004,1.83e-08,74;UBERON:0003102,2.47e-08,99;UBERON:0004119,7.32e-08,160;UBERON:0000925,7.32e-08,160;UBERON:0006595,7.32e-08,160;UBERON:0000165,1.03e-07,29;UBERON:0000930,1.03e-07,29;UBERON:0002419,1.78e-07,2;UBERON:0007771,1.78e-07,2;UBERON:0003297,1.78e-07,2;UBERON:0001821,1.78e-07,2;UBERON:0003487,1.78e-07,2;UBERON:0001820,1.78e-07,2;UBERON:0005089,1.78e-07,2;UBERON:0005088,1.78e-07,2;UBERON:0000033,4.72e-07,56 | |||
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| |||
|short_description=p@chr6:138412531..138412579,- | |||
}} |
Revision as of 18:19, 13 September 2013
Short description: | p@chr6:138412531..138412579, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:138412531..138412579, - |
Coexpression cluster: | C748_amniotic_keratoacanthoma_salivary_Keratinocyte_maxillary_Corneal_esophagus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 5.85e-18 | 42 |
acinar cell | 4.13e-17 | 5 |
protein secreting cell | 3.39e-14 | 6 |
general ecto-epithelial cell | 1.88e-13 | 14 |
endodermal cell | 1.91e-13 | 58 |
epithelial cell of alimentary canal | 1.15e-11 | 20 |
acinar cell of salivary gland | 2.40e-11 | 3 |
epithelial cell | 3.73e-11 | 253 |
gingival epithelial cell | 4.14e-10 | 3 |
glandular epithelial cell | 2.48e-09 | 9 |
ecto-epithelial cell | 6.78e-09 | 34 |
epidermal cell | 1.28e-08 | 9 |
sebum secreting cell | 1.78e-07 | 2 |
epithelial cell of sweat gland | 1.78e-07 | 2 |
epithelial cell of skin gland | 1.78e-07 | 2 |
acinar cell of sebaceous gland | 1.78e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
oral opening | 1.01e-10 | 22 |
gingival epithelium | 4.14e-10 | 3 |
orifice | 4.95e-09 | 36 |
respiratory system | 1.83e-08 | 74 |
surface structure | 2.47e-08 | 99 |
endoderm-derived structure | 7.32e-08 | 160 |
endoderm | 7.32e-08 | 160 |
presumptive endoderm | 7.32e-08 | 160 |
mouth | 1.03e-07 | 29 |
stomodeum | 1.03e-07 | 29 |
skin gland | 1.78e-07 | 2 |
epidermis gland | 1.78e-07 | 2 |
gland of integumental system | 1.78e-07 | 2 |
sebaceous gland | 1.78e-07 | 2 |
skin sebaceous gland | 1.78e-07 | 2 |
sweat gland | 1.78e-07 | 2 |
sweat gland placode | 1.78e-07 | 2 |
sebaceous gland placode | 1.78e-07 | 2 |
head | 4.72e-07 | 56 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.