FFCP PHASE1:Hg19::chr7:120628828..120628878,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79974|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26159|TSSclassifier=S|UniProt=A4D0V7|association_with_transcript=77bp_to_NM_024913,uc003vjq.3_5end|coexpression_cluster_id=C4648|description=CAGE_peak_2_at_C7orf58_5end|id=chr7:120628828..120628878,+|ontology_enrichment_celltype=CL:0000055!1.14e-15!180;CL:0000057!6.34e-12!75;CL:0002620!7.42e-10!23;CL:0000680!1.61e-08!57;CL:0000056!1.61e-08!57;CL:0000355!1.61e-08!57;CL:0000187!1.34e-07!54;CL:0000183!6.19e-07!59|ontology_enrichment_celltype_v019=CL:0002620;3.36e-11;23|ontology_enrichment_celltype_v019_2=CL:0000057,6.16e-12,76;CL:0002620,2.70e-11,23;CL:0000680,1.35e-07,58;CL:0000056,1.35e-07,58;CL:0000355,1.35e-07,58|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!2.00e-14!83;UBERON:0002329!2.00e-14!83;UBERON:0003077!2.00e-14!83;UBERON:0003059!2.00e-14!83;UBERON:0007282!2.00e-14!83;UBERON:0009618!2.00e-14!83;UBERON:0007285!2.00e-14!83;UBERON:0004290!1.04e-12!70;UBERON:0002385!1.01e-10!63;UBERON:0001015!1.01e-10!63;UBERON:0000383!1.01e-10!63;UBERON:0007023!1.57e-10!115;UBERON:0000486!7.51e-10!82;UBERON:0001134!8.12e-10!61;UBERON:0002036!8.12e-10!61;UBERON:0003082!8.12e-10!61;UBERON:0000468!1.74e-09!659;UBERON:0000062!7.31e-09!511;UBERON:0005256!7.35e-09!143;UBERON:0000480!9.61e-09!626;UBERON:0003102!9.77e-09!95;UBERON:0000467!1.07e-08!625;UBERON:0002204!3.53e-08!167;UBERON:0000479!3.66e-08!787;UBERON:0000475!3.92e-07!365;UBERON:0000481!9.61e-07!347|ontology_enrichment_uberon_v019=UBERON:0002385;7.66e-08;31!UBERON:0001015;7.66e-08;31!UBERON:0000383;7.66e-08;31|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.94e-12,73;UBERON:0003077,3.23e-12,72;UBERON:0007285,3.23e-12,72;UBERON:0002329,3.92e-12,71;UBERON:0003059,3.92e-12,71;UBERON:0007282,3.92e-12,71;UBERON:0004290,3.92e-12,71;UBERON:0009618,3.92e-12,71;UBERON:0002385,6.01e-10,64;UBERON:0001015,6.01e-10,64;UBERON:0000383,6.01e-10,64;UBERON:0003102,8.27e-10,99;UBERON:0007503,8.65e-10,78;UBERON:0005256,4.49e-09,122;UBERON:0000479,4.72e-09,773;UBERON:0001134,5.55e-09,62;UBERON:0002036,5.55e-09,62;UBERON:0003082,5.55e-09,62;UBERON:0000486,8.74e-09,83;UBERON:0002097,2.11e-08,41;UBERON:0002199,4.98e-08,46;UBERON:0002416,4.98e-08,46;UBERON:0003104,5.80e-08,160;UBERON:0009142,5.80e-08,160;UBERON:0007023,1.86e-07,114|phase1_expression=1.2717486548939,2.35510576280081,2.53717927372748,0,0.446961094427288,0,0,1.89515962028049,1.30592814099919,0.491467873003018,0,0,0,3.7129905888014,1.65698687863958,5.3786011716142,0.602694528023977,0,1.46379839637152,0.123121058076788,0,0,1.43117993565528,0.136874425072884,0.627713197974014,0,0,0,0,0,0.928896739896456,0,0,0,0,0,0.587200878669695,0,1.00272223735071,0.217010870715852,1.11957737119962,2.26725566213286,2.57575567634187,0.290796477559129,0,0.242584061187816,0.464858073811369,0,0,1.1507695692886,0.256160706529101,0.709446689665756,0.689491361473237,0.645484683583826,1.35426486594342,0.376484679085209,0,0.674170453335254,0.612167784741805,0,0.639337125799041,0.989553900560148,0.199463657621632,0.426224750532694,0.290209238628584,0.56738522469114,0,0.502497330513487,0,0.65156653411535,0.605399502633369,0.368277635987565,0.632924774881769,1.90129757680748,0.850417199860174,1.46761051855863,1.46027220490444,1.35159203557356,2.25015821375912,0.855038231223746,1.19350006319454,2.37463399894024,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,1.68152568894461,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.383587685530591,2.53007406669196,1.00267582127178,0.869079113764942,0,0.486634870302636,1.32348744029695,0,0.351339142772504,2.75056058545197,0,0,0,0,0.132957960518865,7.3932093534656,4.57595928624102,6.68623502393217,0,0,0,0,0,0,0,0,1.77883131343355,1.00416183829401,0.402829317109147,0,0,1.10298924103761,0,0.714397826272638,0.22452937262617,0,0,0,0.183201743930407,0,0,0,1.98788780678127,4.43206790826029,3.70745706277013,4.30254931123221,4.25602058638028,1.12135520028461,0,0.24666754841716,2.17847724779836,0.538842688278752,0.980771418680752,4.54072282934794,6.33793516927999,3.51482147750695,1.87296046098192,2.85235910772225,3.43731965269142,8.33784940370731,11.0073602170329,12.5001217965001,12.2492502752936,9.70391106762967,7.02615311995205,11.8800285728205,3.4617370098998,0,0.718618141816238,14.4769058000497,12.3867334673245,23.8275139316397,8.77955241761676,11.3400484445637,3.00476117813194,2.94923676216055,10.2252092342651,2.56268866582281,1.48352330811693,7.50227740211006,7.00757198821385,5.66809188100384,5.95573940261087,11.6455669246474,4.09235421677034,6.56327813034698,5.24684422261106,7.75901072730297,2.84007674013291,3.32481924151213,2.37384829234683,0.193260853163297,0,0.860413786167011,0,0,0.348581828608555,0.414644220061482,0.252320850875628,0,4.69348596989448,3.85944562915731,2.7626984270496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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79974 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26159 | |||
|TSSclassifier=S | |||
|UniProt=A4D0V7 | |||
|association_with_transcript=77bp_to_NM_024913,uc003vjq.3_5end | |||
|coexpression_cluster_id=C4648 | |||
|description=CAGE_peak_2_at_C7orf58_5end | |||
|id=chr7:120628828..120628878,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.14e-15!180;CL:0000057!6.34e-12!75;CL:0002620!7.42e-10!23;CL:0000680!1.61e-08!57;CL:0000056!1.61e-08!57;CL:0000355!1.61e-08!57;CL:0000187!1.34e-07!54;CL:0000183!6.19e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.36e-11;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.16e-12,76;CL:0002620,2.70e-11,23;CL:0000680,1.35e-07,58;CL:0000056,1.35e-07,58;CL:0000355,1.35e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.00e-14!83;UBERON:0002329!2.00e-14!83;UBERON:0003077!2.00e-14!83;UBERON:0003059!2.00e-14!83;UBERON:0007282!2.00e-14!83;UBERON:0009618!2.00e-14!83;UBERON:0007285!2.00e-14!83;UBERON:0004290!1.04e-12!70;UBERON:0002385!1.01e-10!63;UBERON:0001015!1.01e-10!63;UBERON:0000383!1.01e-10!63;UBERON:0007023!1.57e-10!115;UBERON:0000486!7.51e-10!82;UBERON:0001134!8.12e-10!61;UBERON:0002036!8.12e-10!61;UBERON:0003082!8.12e-10!61;UBERON:0000468!1.74e-09!659;UBERON:0000062!7.31e-09!511;UBERON:0005256!7.35e-09!143;UBERON:0000480!9.61e-09!626;UBERON:0003102!9.77e-09!95;UBERON:0000467!1.07e-08!625;UBERON:0002204!3.53e-08!167;UBERON:0000479!3.66e-08!787;UBERON:0000475!3.92e-07!365;UBERON:0000481!9.61e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;7.66e-08;31!UBERON:0001015;7.66e-08;31!UBERON:0000383;7.66e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.94e-12,73;UBERON:0003077,3.23e-12,72;UBERON:0007285,3.23e-12,72;UBERON:0002329,3.92e-12,71;UBERON:0003059,3.92e-12,71;UBERON:0007282,3.92e-12,71;UBERON:0004290,3.92e-12,71;UBERON:0009618,3.92e-12,71;UBERON:0002385,6.01e-10,64;UBERON:0001015,6.01e-10,64;UBERON:0000383,6.01e-10,64;UBERON:0003102,8.27e-10,99;UBERON:0007503,8.65e-10,78;UBERON:0005256,4.49e-09,122;UBERON:0000479,4.72e-09,773;UBERON:0001134,5.55e-09,62;UBERON:0002036,5.55e-09,62;UBERON:0003082,5.55e-09,62;UBERON:0000486,8.74e-09,83;UBERON:0002097,2.11e-08,41;UBERON:0002199,4.98e-08,46;UBERON:0002416,4.98e-08,46;UBERON:0003104,5.80e-08,160;UBERON:0009142,5.80e-08,160;UBERON:0007023,1.86e-07,114 | |||
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| |||
|short_description=p2@C7orf58 | |||
}} |
Revision as of 22:56, 13 September 2013
Short description: | p2@C7orf58 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_C7orf58_5end |
Coexpression cluster: | C4648_chronic_smooth_mature_aorta_bladder_heart_mesenchymal |
Association with transcript: | 77bp_to_NM_024913, uc003vjq.3_5end |
EntrezGene: | C7orf58 |
HGNC: | 26159 |
UniProt: | A4D0V7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.16e-12 | 76 |
skin fibroblast | 2.70e-11 | 23 |
muscle precursor cell | 1.35e-07 | 58 |
myoblast | 1.35e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.35e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 1.94e-12 | 73 |
paraxial mesoderm | 3.23e-12 | 72 |
presumptive paraxial mesoderm | 3.23e-12 | 72 |
somite | 3.92e-12 | 71 |
presomitic mesoderm | 3.92e-12 | 71 |
presumptive segmental plate | 3.92e-12 | 71 |
dermomyotome | 3.92e-12 | 71 |
trunk paraxial mesoderm | 3.92e-12 | 71 |
muscle tissue | 6.01e-10 | 64 |
musculature | 6.01e-10 | 64 |
musculature of body | 6.01e-10 | 64 |
surface structure | 8.27e-10 | 99 |
epithelial vesicle | 8.65e-10 | 78 |
trunk mesenchyme | 4.49e-09 | 122 |
tissue | 4.72e-09 | 773 |
skeletal muscle tissue | 5.55e-09 | 62 |
striated muscle tissue | 5.55e-09 | 62 |
myotome | 5.55e-09 | 62 |
multilaminar epithelium | 8.74e-09 | 83 |
skin of body | 2.11e-08 | 41 |
integument | 4.98e-08 | 46 |
integumental system | 4.98e-08 | 46 |
mesenchyme | 5.80e-08 | 160 |
entire embryonic mesenchyme | 5.80e-08 | 160 |
adult organism | 1.86e-07 | 114 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.