FFCP PHASE1:Hg19::chr7:142498836..142498876,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1420|description=CAGE_peak_at_chr7:142498836..142498876,-|id=chr7:142498836..142498876,-|ontology_enrichment_celltype=CL:0000542!3.21e-39!53;CL:0000051!3.21e-39!53;CL:0000838!3.05e-38!52;CL:0000084!1.50e-34!25;CL:0000827!1.50e-34!25;CL:0000791!6.31e-28!18;CL:0000789!6.31e-28!18;CL:0002420!6.31e-28!18;CL:0002419!6.31e-28!18;CL:0000790!6.31e-28!18;CL:0002087!3.68e-21!119;CL:0000738!1.70e-18!140;CL:0000625!1.23e-17!11;CL:0002031!9.79e-16!124;CL:0000988!6.07e-14!182;CL:0000037!1.70e-13!172;CL:0000566!1.70e-13!172;CL:0002032!1.53e-11!165;CL:0000837!1.53e-11!165;CL:0000624!9.91e-11!6;CL:0000236!1.57e-09!14;CL:0000080!9.49e-09!6|ontology_enrichment_celltype_v019=CL:0000084;1.81e-53;25!CL:0000791;3.36e-49;18!CL:0000789;3.36e-49;18!CL:0002419;3.36e-49;18!CL:0000625;4.80e-34;11!CL:0000542;3.12e-25;53!CL:0000624;7.45e-20;6!CL:0000898;8.63e-11;3!CL:0000226;7.97e-10;3!CL:0000842;7.97e-10;3!CL:0000815;1.55e-07;2!CL:0000792;1.55e-07;2!CL:0002677;1.55e-07;2!CL:0002087;4.24e-07;104|ontology_enrichment_celltype_v019_2=CL:0000084,1.39e-53,25;CL:0000827,1.39e-53,25;CL:0000791,3.10e-49,18;CL:0000789,3.10e-49,18;CL:0002420,3.10e-49,18;CL:0002419,3.10e-49,18;CL:0000790,3.10e-49,18;CL:0000838,1.96e-42,52;CL:0000542,1.72e-41,53;CL:0000051,1.72e-41,53;CL:0000625,6.09e-34,11;CL:0002087,1.58e-20,115;CL:0000624,5.38e-20,6;CL:0000738,1.45e-17,136;CL:0002031,2.54e-15,120;CL:0000037,1.05e-12,168;CL:0000988,1.15e-11,177;CL:0000898,5.99e-11,3;CL:0000226,1.11e-09,3;CL:0000842,1.11e-09,3;CL:0002032,1.14e-09,161;CL:0000837,1.14e-09,161;CL:0000815,1.12e-07,2;CL:0000792,1.12e-07,2;CL:0002677,1.12e-07,2|ontology_enrichment_development_v019=CL:0000790;3.36e-49;18!CL:0000051;3.12e-25;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!2.76e-13!15;UBERON:0000179!2.76e-13!15;UBERON:0000463!2.76e-13!15;UBERON:0002370!1.52e-07!4;UBERON:0005058!1.52e-07!4;UBERON:0009113!1.52e-07!4;UBERON:0003295!1.52e-07!4;UBERON:0005562!1.52e-07!4|ontology_enrichment_uberon_v019=UBERON:0000178;1.09e-12;15!UBERON:0000179;1.09e-12;15!UBERON:0000463;1.09e-12;15!UBERON:0002370;5.95e-08;2!UBERON:0005058;5.95e-08;2!UBERON:0009113;5.95e-08;2!UBERON:0002390;1.21e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.25e-12,15;UBERON:0000179,1.25e-12,15;UBERON:0000463,1.25e-12,15;UBERON:0002370,1.55e-08,4;UBERON:0005058,1.55e-08,4;UBERON:0009113,1.55e-08,4;UBERON:0003295,1.55e-08,4;UBERON:0005562,1.55e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0.791300934685361,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.152826811495903,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0.142169232487422,0,1.10799081706375,0.401088894940283,0.434021741431704,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,0.889509253863555,1.70692089026603,0,1.14950487990897,0.661044872784862,2.86216126360609,0.569212969109448,0,0,1.32171328579026,0,0,1.180258620683,3.93010762749165,4.11202997999018,3.17654341242288,1.95553359980154,3.78758244587787,1.94826728407911,2.22820913770347,3.24066498222321,6.42448294292501,1.08321545506006,7.30120522436348,7.02320476823343,10.0307121808242,10.2249506580764,4.34704628602579,3.41059095272739,2.1403266247177,5.22677619024884,3.62589896632212,4.59864592322305,3.09264700934367,1.26509846009751,2.54852331459277,2.60433381542567,3.8018081777935,1.05402583354441,1.27986611154418,2.49861453104692,2.36777252044017,1.64225599384209,2.41928091869679,2.67440195783507,5.06885413589796,0,0,0,0,0,0,0,0,0,0.221729397462564,0.702678285545008,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0,1.25849830862972,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0.916008719652036,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0365774853663,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0.591092280605782,1.72502059887614,2.95188983443421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.2942852049117,1.06727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949138274156178,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573645408816206,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0.443430153536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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1420 | |||
|description=CAGE_peak_at_chr7:142498836..142498876,- | |||
|id=chr7:142498836..142498876,- | |||
|ontology_enrichment_celltype=CL:0000542!3.21e-39!53;CL:0000051!3.21e-39!53;CL:0000838!3.05e-38!52;CL:0000084!1.50e-34!25;CL:0000827!1.50e-34!25;CL:0000791!6.31e-28!18;CL:0000789!6.31e-28!18;CL:0002420!6.31e-28!18;CL:0002419!6.31e-28!18;CL:0000790!6.31e-28!18;CL:0002087!3.68e-21!119;CL:0000738!1.70e-18!140;CL:0000625!1.23e-17!11;CL:0002031!9.79e-16!124;CL:0000988!6.07e-14!182;CL:0000037!1.70e-13!172;CL:0000566!1.70e-13!172;CL:0002032!1.53e-11!165;CL:0000837!1.53e-11!165;CL:0000624!9.91e-11!6;CL:0000236!1.57e-09!14;CL:0000080!9.49e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.81e-53;25!CL:0000791;3.36e-49;18!CL:0000789;3.36e-49;18!CL:0002419;3.36e-49;18!CL:0000625;4.80e-34;11!CL:0000542;3.12e-25;53!CL:0000624;7.45e-20;6!CL:0000898;8.63e-11;3!CL:0000226;7.97e-10;3!CL:0000842;7.97e-10;3!CL:0000815;1.55e-07;2!CL:0000792;1.55e-07;2!CL:0002677;1.55e-07;2!CL:0002087;4.24e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.39e-53,25;CL:0000827,1.39e-53,25;CL:0000791,3.10e-49,18;CL:0000789,3.10e-49,18;CL:0002420,3.10e-49,18;CL:0002419,3.10e-49,18;CL:0000790,3.10e-49,18;CL:0000838,1.96e-42,52;CL:0000542,1.72e-41,53;CL:0000051,1.72e-41,53;CL:0000625,6.09e-34,11;CL:0002087,1.58e-20,115;CL:0000624,5.38e-20,6;CL:0000738,1.45e-17,136;CL:0002031,2.54e-15,120;CL:0000037,1.05e-12,168;CL:0000988,1.15e-11,177;CL:0000898,5.99e-11,3;CL:0000226,1.11e-09,3;CL:0000842,1.11e-09,3;CL:0002032,1.14e-09,161;CL:0000837,1.14e-09,161;CL:0000815,1.12e-07,2;CL:0000792,1.12e-07,2;CL:0002677,1.12e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;3.36e-49;18!CL:0000051;3.12e-25;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.76e-13!15;UBERON:0000179!2.76e-13!15;UBERON:0000463!2.76e-13!15;UBERON:0002370!1.52e-07!4;UBERON:0005058!1.52e-07!4;UBERON:0009113!1.52e-07!4;UBERON:0003295!1.52e-07!4;UBERON:0005562!1.52e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.09e-12;15!UBERON:0000179;1.09e-12;15!UBERON:0000463;1.09e-12;15!UBERON:0002370;5.95e-08;2!UBERON:0005058;5.95e-08;2!UBERON:0009113;5.95e-08;2!UBERON:0002390;1.21e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.25e-12,15;UBERON:0000179,1.25e-12,15;UBERON:0000463,1.25e-12,15;UBERON:0002370,1.55e-08,4;UBERON:0005058,1.55e-08,4;UBERON:0009113,1.55e-08,4;UBERON:0003295,1.55e-08,4;UBERON:0005562,1.55e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0.791300934685361,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.152826811495903,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0.142169232487422,0,1.10799081706375,0.401088894940283,0.434021741431704,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,0.889509253863555,1.70692089026603,0,1.14950487990897,0.661044872784862,2.86216126360609,0.569212969109448,0,0,1.32171328579026,0,0,1.180258620683,3.93010762749165,4.11202997999018,3.17654341242288,1.95553359980154,3.78758244587787,1.94826728407911,2.22820913770347,3.24066498222321,6.42448294292501,1.08321545506006,7.30120522436348,7.02320476823343,10.0307121808242,10.2249506580764,4.34704628602579,3.41059095272739,2.1403266247177,5.22677619024884,3.62589896632212,4.59864592322305,3.09264700934367,1.26509846009751,2.54852331459277,2.60433381542567,3.8018081777935,1.05402583354441,1.27986611154418,2.49861453104692,2.36777252044017,1.64225599384209,2.41928091869679,2.67440195783507,5.06885413589796,0,0,0,0,0,0,0,0,0,0.221729397462564,0.702678285545008,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0,1.25849830862972,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0.916008719652036,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0365774853663,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0.591092280605782,1.72502059887614,2.95188983443421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.2942852049117,1.06727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949138274156178,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573645408816206,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0.443430153536676,0,3.55213326462519,0.764637207142375,2.84823593587081,2.38231775457789,2.87953591160336,0,0,3.17250070517708,0,0,0,0.185803175125719,0,17.4297516203615,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.66866030566487,0,0,0,0,0,0,0,0.329607748453519,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,8.17546385565892,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0.611030144933625,0.296521128680622,0.494255755786011,0.208843899010911,0,0,0,0.729819156862664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.213574825135389,0,0,1.48849806543585,0.790446527591777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39991177098451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0.0657727735628491,0,0.444925607568277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754814217833368,0,0,0.940634592723046,0,0,0.196308467114945,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,5.81300188524055,2.60713800042603,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,1.20764276154616,0 | |||
|short_description=p@chr7:142498836..142498876,- | |||
}} |
Revision as of 23:42, 13 September 2013
Short description: | p@chr7:142498836..142498876, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:142498836..142498876, - |
Coexpression cluster: | C1420_CD4_acute_Hodgkin_chronic_thymus_CD8_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.39e-53 | 25 |
pro-T cell | 1.39e-53 | 25 |
mature alpha-beta T cell | 3.10e-49 | 18 |
alpha-beta T cell | 3.10e-49 | 18 |
immature T cell | 3.10e-49 | 18 |
mature T cell | 3.10e-49 | 18 |
immature alpha-beta T cell | 3.10e-49 | 18 |
lymphoid lineage restricted progenitor cell | 1.96e-42 | 52 |
lymphocyte | 1.72e-41 | 53 |
common lymphoid progenitor | 1.72e-41 | 53 |
CD8-positive, alpha-beta T cell | 6.09e-34 | 11 |
nongranular leukocyte | 1.58e-20 | 115 |
CD4-positive, alpha-beta T cell | 5.38e-20 | 6 |
leukocyte | 1.45e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 2.54e-15 | 120 |
hematopoietic stem cell | 1.05e-12 | 168 |
hematopoietic cell | 1.15e-11 | 177 |
naive T cell | 5.99e-11 | 3 |
single nucleate cell | 1.11e-09 | 3 |
mononuclear cell | 1.11e-09 | 3 |
hematopoietic oligopotent progenitor cell | 1.14e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.14e-09 | 161 |
regulatory T cell | 1.12e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.12e-07 | 2 |
naive regulatory T cell | 1.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.25e-12 | 15 |
haemolymphatic fluid | 1.25e-12 | 15 |
organism substance | 1.25e-12 | 15 |
thymus | 1.55e-08 | 4 |
hemolymphoid system gland | 1.55e-08 | 4 |
thymic region | 1.55e-08 | 4 |
pharyngeal gland | 1.55e-08 | 4 |
thymus primordium | 1.55e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.