FFCP PHASE1:Hg19::chr9:113800817..113800828,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1902|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3166|TSSclassifier=S|UniProt=B1AP63|association_with_transcript=-79bp_to_ENST00000441240_5end|description=CAGE_peak_17_at_LPAR1_5end|id=chr9:113800817..113800828,-|ontology_enrichment_celltype=CL:0000057!9.88e-14!75;CL:0000055!9.84e-13!180;CL:0000136!3.18e-07!15|ontology_enrichment_celltype_v019=CL:0000136;1.66e-13;13!CL:0002552;1.71e-11;5!CL:0002615;1.93e-08;3!CL:0002564;1.18e-07;3!CL:0000499;1.87e-07;28!CL:0002622;2.81e-07;3!CL:0002521;3.84e-07;3!CL:0000515;3.84e-07;3|ontology_enrichment_celltype_v019_2=CL:0000136,6.59e-17,15;CL:0002552,1.16e-11,5;CL:0000057,5.47e-10,76;CL:0002615,2.09e-08,3;CL:0002564,9.54e-08,3;CL:0000499,1.31e-07,28;CL:0002622,1.49e-07,3;CL:0002521,3.48e-07,3;CL:0002320,5.41e-07,361|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!6.32e-13!365;UBERON:0003102!5.98e-11!95;UBERON:0007023!6.48e-10!115;UBERON:0000468!8.37e-09!659;UBERON:0000033!1.97e-08!123;UBERON:0000153!3.48e-08!129;UBERON:0007811!3.48e-08!129;UBERON:0000914!5.23e-08!83;UBERON:0002329!5.23e-08!83;UBERON:0003077!5.23e-08!83;UBERON:0003059!5.23e-08!83;UBERON:0007282!5.23e-08!83;UBERON:0009618!5.23e-08!83;UBERON:0007285!5.23e-08!83;UBERON:0000161!3.10e-07!35;UBERON:0001049!8.17e-07!57;UBERON:0005068!8.17e-07!57;UBERON:0006241!8.17e-07!57;UBERON:0007135!8.17e-07!57;UBERON:0000955!8.32e-07!69;UBERON:0006238!8.32e-07!69;UBERON:0002616!8.34e-07!59|ontology_enrichment_uberon_v019=UBERON:0004905;4.29e-14;8!UBERON:0000982;4.29e-14;8!UBERON:0004770;4.29e-14;8!UBERON:0000075;7.28e-13;16!UBERON:0004457;1.14e-12;9!UBERON:0000042;1.14e-12;9!UBERON:0011135;4.78e-12;5!UBERON:0002216;4.78e-12;5!UBERON:0011134;4.78e-12;5!UBERON:0002209;4.78e-12;5!UBERON:0002213;4.78e-12;5!UBERON:0007844;4.78e-12;5!UBERON:0011138;4.78e-12;5!UBERON:0001130;4.78e-12;5!UBERON:0001066;4.78e-12;5!UBERON:0001468;4.78e-12;5!UBERON:0003688;2.89e-10;6!UBERON:0002358;2.89e-10;6!UBERON:0003684;2.89e-10;6!UBERON:0001178;2.89e-10;6!UBERON:0001434;4.98e-10;36!UBERON:0001013;9.36e-09;14!UBERON:0004765;7.27e-08;26!UBERON:0002242;1.18e-07;3!UBERON:0002190;3.84e-07;3!UBERON:0001828;5.40e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0004905,3.05e-14,8;UBERON:0000982,3.05e-14,8;UBERON:0004770,3.05e-14,8;UBERON:0000075,5.59e-13,16;UBERON:0011135,3.46e-12,5;UBERON:0002216,3.46e-12,5;UBERON:0011134,3.46e-12,5;UBERON:0002209,3.46e-12,5;UBERON:0002213,3.46e-12,5;UBERON:0005856,3.46e-12,5;UBERON:0005866,3.46e-12,5;UBERON:0005863,3.46e-12,5;UBERON:0007844,3.46e-12,5;UBERON:0011138,3.46e-12,5;UBERON:0001130,3.46e-12,5;UBERON:0001066,3.46e-12,5;UBERON:0001468,3.46e-12,5;UBERON:0003688,3.69e-10,6;UBERON:0002358,3.69e-10,6;UBERON:0003684,3.69e-10,6;UBERON:0001178,3.69e-10,6;UBERON:0011137,1.78e-09,14;UBERON:0004457,4.16e-09,12;UBERON:0000042,4.16e-09,12;UBERON:0001013,6.86e-09,14;UBERON:0002242,9.54e-08,3;UBERON:0003068,9.54e-08,3;UBERON:0002328,9.54e-08,3;UBERON:0004880,9.54e-08,3;UBERON:0002384,2.51e-07,371;UBERON:0002190,3.48e-07,3;UBERON:0001828,4.28e-07,8|phase1_expression=7.26713517082227,3.21150785836475,14.518303621885,5.00366491765652,8.93922188854576,8.72338524100369,2.53299878168311,2.52687949370732,1.30592814099919,0,0,0,0,5.81701858912219,5.63375538737457,0,0,0,0,0,1.02000345622126,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0.217010870715852,0.223915474239924,0.32389366601898,1.03030227053675,0,0,0.242584061187816,0,0,0.619412741790207,0.28769239232215,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0.641858054152187,0,0,0,0,0,0,0,0.75374599577023,0,0.65156653411535,0.605399502633369,0,0.632924774881769,0.211255286311942,0,0.209658645508376,0,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,2.1686349143074,2.00535164254356,2.462390822334,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.529636723252875,0.573673241497627,1.06400514659507,1.12135520028461,0,0,0.311211035399766,0.134710672069688,0,0.756787138224657,1.72852777344,0,0.624320153660641,0,1.04614076386261,0.117434498643765,0.161872944368132,0.702254033511242,2.65400422631361,1.47401180774122,3.30642499762449,4.75201142912821,3.95627086845691,0.910161361938026,4.31170885089743,0,0.750711119231785,3.87889761677856,3.07284334616587,1.5324389789951,6.30999847407706,0.113432183160021,0.358779271377724,0.427114777637135,0.211931901159562,0,0.618315175430633,1.28820270022815,1.11670113798954,0.506328996723799,0.0974370051611986,0.252433774244115,0.644349290496095,1.2931684545505,0.710019185033229,0.201504196455281,1.3564847384839,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,1.85747171212792,5.77503585335668,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0.426467963801962,0.23806443146374,0,0.0620747142958579,0.112131862580613,0.25458863311266,1.41482032270754,0.435433495793923,0.684466602170562,0.5388164241167,1.00411087549747,0.332660356546013,0,0.747091421144008,3.8614456457388,0,0,0.733448665097199,0,0.665756774185513,0.603821380773079,0|short_description=p17@LPAR1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=1902 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3166 | |||
|TSSclassifier=S | |||
|UniProt=B1AP63 | |||
|association_with_transcript=-79bp_to_ENST00000441240_5end | |||
|description=CAGE_peak_17_at_LPAR1_5end | |||
|id=chr9:113800817..113800828,- | |||
|ontology_enrichment_celltype=CL:0000057!9.88e-14!75;CL:0000055!9.84e-13!180;CL:0000136!3.18e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.66e-13;13!CL:0002552;1.71e-11;5!CL:0002615;1.93e-08;3!CL:0002564;1.18e-07;3!CL:0000499;1.87e-07;28!CL:0002622;2.81e-07;3!CL:0002521;3.84e-07;3!CL:0000515;3.84e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.59e-17,15;CL:0002552,1.16e-11,5;CL:0000057,5.47e-10,76;CL:0002615,2.09e-08,3;CL:0002564,9.54e-08,3;CL:0000499,1.31e-07,28;CL:0002622,1.49e-07,3;CL:0002521,3.48e-07,3;CL:0002320,5.41e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.32e-13!365;UBERON:0003102!5.98e-11!95;UBERON:0007023!6.48e-10!115;UBERON:0000468!8.37e-09!659;UBERON:0000033!1.97e-08!123;UBERON:0000153!3.48e-08!129;UBERON:0007811!3.48e-08!129;UBERON:0000914!5.23e-08!83;UBERON:0002329!5.23e-08!83;UBERON:0003077!5.23e-08!83;UBERON:0003059!5.23e-08!83;UBERON:0007282!5.23e-08!83;UBERON:0009618!5.23e-08!83;UBERON:0007285!5.23e-08!83;UBERON:0000161!3.10e-07!35;UBERON:0001049!8.17e-07!57;UBERON:0005068!8.17e-07!57;UBERON:0006241!8.17e-07!57;UBERON:0007135!8.17e-07!57;UBERON:0000955!8.32e-07!69;UBERON:0006238!8.32e-07!69;UBERON:0002616!8.34e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;4.29e-14;8!UBERON:0000982;4.29e-14;8!UBERON:0004770;4.29e-14;8!UBERON:0000075;7.28e-13;16!UBERON:0004457;1.14e-12;9!UBERON:0000042;1.14e-12;9!UBERON:0011135;4.78e-12;5!UBERON:0002216;4.78e-12;5!UBERON:0011134;4.78e-12;5!UBERON:0002209;4.78e-12;5!UBERON:0002213;4.78e-12;5!UBERON:0007844;4.78e-12;5!UBERON:0011138;4.78e-12;5!UBERON:0001130;4.78e-12;5!UBERON:0001066;4.78e-12;5!UBERON:0001468;4.78e-12;5!UBERON:0003688;2.89e-10;6!UBERON:0002358;2.89e-10;6!UBERON:0003684;2.89e-10;6!UBERON:0001178;2.89e-10;6!UBERON:0001434;4.98e-10;36!UBERON:0001013;9.36e-09;14!UBERON:0004765;7.27e-08;26!UBERON:0002242;1.18e-07;3!UBERON:0002190;3.84e-07;3!UBERON:0001828;5.40e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,3.05e-14,8;UBERON:0000982,3.05e-14,8;UBERON:0004770,3.05e-14,8;UBERON:0000075,5.59e-13,16;UBERON:0011135,3.46e-12,5;UBERON:0002216,3.46e-12,5;UBERON:0011134,3.46e-12,5;UBERON:0002209,3.46e-12,5;UBERON:0002213,3.46e-12,5;UBERON:0005856,3.46e-12,5;UBERON:0005866,3.46e-12,5;UBERON:0005863,3.46e-12,5;UBERON:0007844,3.46e-12,5;UBERON:0011138,3.46e-12,5;UBERON:0001130,3.46e-12,5;UBERON:0001066,3.46e-12,5;UBERON:0001468,3.46e-12,5;UBERON:0003688,3.69e-10,6;UBERON:0002358,3.69e-10,6;UBERON:0003684,3.69e-10,6;UBERON:0001178,3.69e-10,6;UBERON:0011137,1.78e-09,14;UBERON:0004457,4.16e-09,12;UBERON:0000042,4.16e-09,12;UBERON:0001013,6.86e-09,14;UBERON:0002242,9.54e-08,3;UBERON:0003068,9.54e-08,3;UBERON:0002328,9.54e-08,3;UBERON:0004880,9.54e-08,3;UBERON:0002384,2.51e-07,371;UBERON:0002190,3.48e-07,3;UBERON:0001828,4.28e-07,8 | |||
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| |||
|short_description=p17@LPAR1 | |||
}} |
Revision as of 06:57, 14 September 2013
Short description: | p17@LPAR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_LPAR1_5end |
Coexpression cluster: | NA |
Association with transcript: | -79bp_to_ENST00000441240_5end |
EntrezGene: | LPAR1 |
HGNC: | 3166 |
UniProt: | B1AP63 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.59e-17 | 15 |
fibroblast of gingiva | 1.16e-11 | 5 |
fibroblast | 5.47e-10 | 76 |
adipocyte of omentum tissue | 2.09e-08 | 3 |
nucleus pulposus cell of intervertebral disc | 9.54e-08 | 3 |
stromal cell | 1.31e-07 | 28 |
prostate stromal cell | 1.49e-07 | 3 |
subcutaneous fat cell | 3.48e-07 | 3 |
connective tissue cell | 5.41e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
articulation | 3.05e-14 | 8 |
skeletal joint | 3.05e-14 | 8 |
articular system | 3.05e-14 | 8 |
subdivision of skeletal system | 5.59e-13 | 16 |
intervertebral cartilage | 3.46e-12 | 5 |
symphysis | 3.46e-12 | 5 |
nonsynovial joint | 3.46e-12 | 5 |
fibrous joint | 3.46e-12 | 5 |
cartilaginous joint | 3.46e-12 | 5 |
developing mesenchymal condensation | 3.46e-12 | 5 |
pre-cartilage condensation | 3.46e-12 | 5 |
cartilaginous condensation | 3.46e-12 | 5 |
cartilage element | 3.46e-12 | 5 |
post-cranial axial skeletal system | 3.46e-12 | 5 |
vertebral column | 3.46e-12 | 5 |
intervertebral disk | 3.46e-12 | 5 |
intervertebral joint | 3.46e-12 | 5 |
omentum | 3.69e-10 | 6 |
peritoneum | 3.69e-10 | 6 |
abdominal cavity | 3.69e-10 | 6 |
visceral peritoneum | 3.69e-10 | 6 |
axial skeletal system | 1.78e-09 | 14 |
cavity lining | 4.16e-09 | 12 |
serous membrane | 4.16e-09 | 12 |
adipose tissue | 6.86e-09 | 14 |
nucleus pulposus | 9.54e-08 | 3 |
axial mesoderm | 9.54e-08 | 3 |
notochord | 9.54e-08 | 3 |
chordamesoderm | 9.54e-08 | 3 |
connective tissue | 2.51e-07 | 371 |
subcutaneous adipose tissue | 3.48e-07 | 3 |
gingiva | 4.28e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.