FFCP PHASE1:Hg19::chr9:114557207..114557230,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=158401|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26535|TSSclassifier=S|UniProt=Q5VXU9|association_with_transcript=0bp_to_ENST00000374287,uc004bfs.1,uc011lwt.1_5end|description=CAGE_peak_1_at_C9orf84_5end|id=chr9:114557207..114557230,-|ontology_enrichment_celltype=CL:0000066!8.38e-15!254;CL:0000076!2.47e-11!62;CL:0002150!3.01e-10!3;CL:0000861!3.01e-10!3;CL:0002097!5.98e-08!2;CL:0000039!4.28e-07!7;CL:0000586!4.28e-07!7|ontology_enrichment_celltype_v019=CL:0000076;2.57e-07;63|ontology_enrichment_celltype_v019_2=CL:0000076,1.25e-13,63;CL:0000066,5.58e-07,253|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!5.87e-35!106;DOID:0050687!8.04e-30!143;DOID:1749!4.93e-27!14;DOID:162!4.25e-23!235;DOID:14566!2.26e-22!239;DOID:4362!1.89e-11!5;DOID:1909!2.79e-07!2|ontology_enrichment_disease_v019=DOID:1749;2.03e-35;14!DOID:4362;3.31e-15;5!DOID:0060085;2.65e-09;1!DOID:0050619;2.65e-09;1!DOID:3165;2.65e-09;1!DOID:0060121;2.65e-09;1!DOID:2438;2.65e-09;1!DOID:4418;2.65e-09;1!DOID:1357;2.65e-09;1|ontology_enrichment_disease_v019_2=DOID:1749,1.21e-35,14;DOID:305,1.10e-18,106;DOID:4362,1.77e-15,5;DOID:0050687,7.47e-15,143;DOID:162,3.08e-14,235;DOID:14566,7.29e-14,239;DOID:0060085,1.99e-09,1;DOID:3165,1.99e-09,1;DOID:0060121,1.99e-09,1;DOID:2438,1.99e-09,1;DOID:4418,1.99e-09,1;DOID:0050619,3.25e-09,1;DOID:1357,3.25e-09,1|ontology_enrichment_uberon=UBERON:0001737!1.05e-21!9;UBERON:0003343!3.61e-13!4;UBERON:0004785!3.61e-13!4;UBERON:0001557!5.04e-12!19;UBERON:0003729!1.52e-10!5;UBERON:0000473!4.89e-10!8;UBERON:0000002!1.55e-09!6;UBERON:0001560!1.55e-09!6;UBERON:0001004!1.23e-08!72;UBERON:0008947!7.30e-08!38;UBERON:0003258!7.30e-08!38;UBERON:0000072!2.39e-07!46;UBERON:0003135!3.37e-07!11;UBERON:0000065!3.61e-07!53|ontology_enrichment_uberon_v019=UBERON:0000002;9.13e-13;6!UBERON:0001560;9.13e-13;6!UBERON:0000997;2.65e-09;1!UBERON:0001764;2.65e-09;1!UBERON:0005056;2.65e-09;1!UBERON:0001825;2.65e-09;1!UBERON:0004176;2.65e-09;1!UBERON:0003343;6.72e-09;4!UBERON:0004785;6.72e-09;4!UBERON:0001737;1.63e-08;9!UBERON:0001557;1.63e-08;9|ontology_enrichment_uberon_v019_2=UBERON:0000002,5.43e-13,6;UBERON:0001560,5.43e-13,6;UBERON:0001764,3.25e-09,1;UBERON:0001825,3.25e-09,1;UBERON:0000997,3.83e-09,1;UBERON:0005056,3.83e-09,1;UBERON:0003343,8.89e-09,4;UBERON:0004785,8.89e-09,4;UBERON:0001737,2.63e-08,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,1.30137480043828,1.01150814046861,0.482022059766964,0.882351781859152,0.217879444092406,0.237270619111097,1.21348177344148,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89752799121444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718946809178615,0,0,0,0,0,0,0,0,0,0,0,1.93448862085349,0,0,0,0,0,0,0,0,0,0,0,1.96089234334182,1.81250867562184,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,1.17398771359254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27390116638691,7.05179573301261,0,0,0.677294319023596,1.0232504392066,0.246346371159628,0,0,0,0,1.78843150532691,0,3.12882212375685,0,0,0,0.576361668616424,0,0.343189995723929,0,0,1.64985824231757,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,1.53532157855556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,1.41348686625211,0,0,0,0,0,0,0.138348634936231,0,0.454947352624943,0.570930667089935,0,1.87333962322753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.04501643855337,0.857766365499703,0,0,0,0,0,0,0,0,0.38582807654183,1.52048196587765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57036349601641,1.06172751012966,0.183428598521679,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96409332466223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0.36757959813938,0.752122617877125,2.04602485189246,1.60778478093707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732629417498771,0,0,0,0,0,0,0,0,0|short_description=p1@C9orf84}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=158401 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26535 | |||
|TSSclassifier=S | |||
|UniProt=Q5VXU9 | |||
|association_with_transcript=0bp_to_ENST00000374287,uc004bfs.1,uc011lwt.1_5end | |||
|description=CAGE_peak_1_at_C9orf84_5end | |||
|id=chr9:114557207..114557230,- | |||
|ontology_enrichment_celltype=CL:0000066!8.38e-15!254;CL:0000076!2.47e-11!62;CL:0002150!3.01e-10!3;CL:0000861!3.01e-10!3;CL:0002097!5.98e-08!2;CL:0000039!4.28e-07!7;CL:0000586!4.28e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000076;2.57e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000076,1.25e-13,63;CL:0000066,5.58e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.87e-35!106;DOID:0050687!8.04e-30!143;DOID:1749!4.93e-27!14;DOID:162!4.25e-23!235;DOID:14566!2.26e-22!239;DOID:4362!1.89e-11!5;DOID:1909!2.79e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.03e-35;14!DOID:4362;3.31e-15;5!DOID:0060085;2.65e-09;1!DOID:0050619;2.65e-09;1!DOID:3165;2.65e-09;1!DOID:0060121;2.65e-09;1!DOID:2438;2.65e-09;1!DOID:4418;2.65e-09;1!DOID:1357;2.65e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.21e-35,14;DOID:305,1.10e-18,106;DOID:4362,1.77e-15,5;DOID:0050687,7.47e-15,143;DOID:162,3.08e-14,235;DOID:14566,7.29e-14,239;DOID:0060085,1.99e-09,1;DOID:3165,1.99e-09,1;DOID:0060121,1.99e-09,1;DOID:2438,1.99e-09,1;DOID:4418,1.99e-09,1;DOID:0050619,3.25e-09,1;DOID:1357,3.25e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.05e-21!9;UBERON:0003343!3.61e-13!4;UBERON:0004785!3.61e-13!4;UBERON:0001557!5.04e-12!19;UBERON:0003729!1.52e-10!5;UBERON:0000473!4.89e-10!8;UBERON:0000002!1.55e-09!6;UBERON:0001560!1.55e-09!6;UBERON:0001004!1.23e-08!72;UBERON:0008947!7.30e-08!38;UBERON:0003258!7.30e-08!38;UBERON:0000072!2.39e-07!46;UBERON:0003135!3.37e-07!11;UBERON:0000065!3.61e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0000002;9.13e-13;6!UBERON:0001560;9.13e-13;6!UBERON:0000997;2.65e-09;1!UBERON:0001764;2.65e-09;1!UBERON:0005056;2.65e-09;1!UBERON:0001825;2.65e-09;1!UBERON:0004176;2.65e-09;1!UBERON:0003343;6.72e-09;4!UBERON:0004785;6.72e-09;4!UBERON:0001737;1.63e-08;9!UBERON:0001557;1.63e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,5.43e-13,6;UBERON:0001560,5.43e-13,6;UBERON:0001764,3.25e-09,1;UBERON:0001825,3.25e-09,1;UBERON:0000997,3.83e-09,1;UBERON:0005056,3.83e-09,1;UBERON:0003343,8.89e-09,4;UBERON:0004785,8.89e-09,4;UBERON:0001737,2.63e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,1.30137480043828,1.01150814046861,0.482022059766964,0.882351781859152,0.217879444092406,0.237270619111097,1.21348177344148,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89752799121444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718946809178615,0,0,0,0,0,0,0,0,0,0,0,1.93448862085349,0,0,0,0,0,0,0,0,0,0,0,1.96089234334182,1.81250867562184,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,1.17398771359254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27390116638691,7.05179573301261,0,0,0.677294319023596,1.0232504392066,0.246346371159628,0,0,0,0,1.78843150532691,0,3.12882212375685,0,0,0,0.576361668616424,0,0.343189995723929,0,0,1.64985824231757,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,1.53532157855556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,1.41348686625211,0,0,0,0,0,0,0.138348634936231,0,0.454947352624943,0.570930667089935,0,1.87333962322753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.04501643855337,0.857766365499703,0,0,0,0,0,0,0,0,0.38582807654183,1.52048196587765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57036349601641,1.06172751012966,0.183428598521679,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96409332466223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0.36757959813938,0.752122617877125,2.04602485189246,1.60778478093707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732629417498771,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@C9orf84 | |||
}} |
Revision as of 06:59, 14 September 2013
Short description: | p1@C9orf84 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_C9orf84_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000374287, uc004bfs.1, uc011lwt.1_5end |
EntrezGene: | C9orf84 |
HGNC: | 26535 |
UniProt: | Q5VXU9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 1.25e-13 | 63 |
epithelial cell | 5.58e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 5.43e-13 | 6 |
neck of organ | 5.43e-13 | 6 |
maxillary sinus | 3.25e-09 | 1 |
paranasal sinus | 3.25e-09 | 1 |
mammalian vulva | 3.83e-09 | 1 |
external female genitalia | 3.83e-09 | 1 |
mucosa of oral region | 8.89e-09 | 4 |
respiratory system mucosa | 8.89e-09 | 4 |
larynx | 2.63e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.21e-35 | 14 |
carcinoma | 1.10e-18 | 106 |
cervical cancer | 1.77e-15 | 5 |
cell type cancer | 7.47e-15 | 143 |
cancer | 3.08e-14 | 235 |
disease of cellular proliferation | 7.29e-14 | 239 |
organ system benign neoplasm | 1.99e-09 | 1 |
skin benign neoplasm | 1.99e-09 | 1 |
integumentary system benign neoplasm | 1.99e-09 | 1 |
dermis tumor | 1.99e-09 | 1 |
cutaneous fibrous histiocytoma | 1.99e-09 | 1 |
paranasal sinus cancer | 3.25e-09 | 1 |
maxillary sinus cancer | 3.25e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.