FFCP PHASE1:Hg19::chrX:17755696..17755727,+: Difference between revisions
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{{FFCP | 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741982,0,0.275684698604535,0,13.9432804721561,27.6003054060864,5.80418607621146,1.86179392551411,5.33084954752452,1.66645102024618,1.22718928688412,1.73809200028402,5.38232940386944,0.954707374172474,1.0105859447911,3.9189014621453,7.1868993227909,1.01028079521881,2.438554983351,3.32660356546013,2.68630786416216,2.98836568457603,3.8614456457388,2.96423166951737,0,1.95586310692586,0.406896178315738,5.3260541934841,2.01273793591026,0.641136984606466|short_description=p3@SCML1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6322 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10580 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=25bp_to_ENST00000427362_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_SCML1_5end | |||
|id=chrX:17755696..17755727,+ | |||
|ontology_enrichment_celltype=CL:0000766!7.06e-24!76;CL:0000860!1.79e-23!45;CL:0002057!9.38e-23!42;CL:0000557!1.26e-22!71;CL:0002009!1.08e-21!65;CL:0002194!1.71e-20!63;CL:0000576!1.71e-20!63;CL:0000040!1.71e-20!63;CL:0000559!1.71e-20!63;CL:0000839!1.90e-20!70;CL:0000763!6.32e-08!112;CL:0000049!6.32e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.21e-19;33!CL:0002057;2.21e-19;33!CL:0000473;2.49e-16;39!CL:0000234;2.49e-16;39!CL:0000576;2.42e-14;48!CL:0000766;5.16e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.84e-24,72;CL:0000473,4.21e-24,48;CL:0000234,4.21e-24,48;CL:0000860,1.40e-23,42;CL:0002057,1.40e-23,42;CL:0000557,2.35e-23,67;CL:0002009,3.04e-22,61;CL:0000839,3.25e-21,66;CL:0002194,5.50e-21,59;CL:0000576,5.50e-21,59;CL:0000040,5.50e-21,59;CL:0000559,5.50e-21,59;CL:0000763,8.05e-09,108;CL:0000049,8.05e-09,108;CL:0000134,5.05e-08,354;CL:0002320,4.55e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.60e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!1.60e-22!511;UBERON:0004765!2.73e-20!101;UBERON:0001434!2.73e-20!101;UBERON:0002371!5.08e-20!80;UBERON:0001474!1.39e-19!86;UBERON:0002405!4.67e-19!115;UBERON:0000467!3.12e-13!625;UBERON:0000480!6.41e-13!626;UBERON:0000926!1.14e-12!448;UBERON:0004120!1.14e-12!448;UBERON:0006603!1.14e-12!448;UBERON:0002204!1.32e-12!167;UBERON:0002390!1.75e-11!102;UBERON:0003061!1.75e-11!102;UBERON:0000468!6.27e-11!659;UBERON:0002193!5.34e-10!112;UBERON:0000923!2.82e-08!604;UBERON:0005291!2.82e-08!604;UBERON:0006598!2.82e-08!604;UBERON:0002532!2.82e-08!604;UBERON:0002050!4.06e-08!605;UBERON:0005423!4.06e-08!605;UBERON:0000922!2.86e-07!612 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.31e-20,76;UBERON:0001474,6.01e-20,82;UBERON:0001434,7.22e-19,100;UBERON:0004765,4.26e-17,90;UBERON:0002405,3.03e-16,93;UBERON:0002390,1.61e-12,98;UBERON:0003061,1.61e-12,98;UBERON:0002193,5.53e-11,108;UBERON:0002204,8.65e-11,167;UBERON:0002384,4.58e-07,371;UBERON:0001007,9.80e-07,145;UBERON:0001555,9.80e-07,145;UBERON:0007026,9.80e-07,145 | |||
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| |||
|short_description=p3@SCML1 | |||
}} |
Revision as of 11:30, 14 September 2013
Short description: | p3@SCML1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SCML1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 25bp_to_ENST00000427362_5end |
EntrezGene: | SCML1 |
HGNC: | 10580 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.84e-24 | 72 |
defensive cell | 4.21e-24 | 48 |
phagocyte | 4.21e-24 | 48 |
classical monocyte | 1.40e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.40e-23 | 42 |
granulocyte monocyte progenitor cell | 2.35e-23 | 67 |
macrophage dendritic cell progenitor | 3.04e-22 | 61 |
myeloid lineage restricted progenitor cell | 3.25e-21 | 66 |
monopoietic cell | 5.50e-21 | 59 |
monocyte | 5.50e-21 | 59 |
monoblast | 5.50e-21 | 59 |
promonocyte | 5.50e-21 | 59 |
myeloid cell | 8.05e-09 | 108 |
common myeloid progenitor | 8.05e-09 | 108 |
mesenchymal cell | 5.05e-08 | 354 |
connective tissue cell | 4.55e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.31e-20 | 76 |
bone element | 6.01e-20 | 82 |
skeletal system | 7.22e-19 | 100 |
skeletal element | 4.26e-17 | 90 |
immune system | 3.03e-16 | 93 |
hematopoietic system | 1.61e-12 | 98 |
blood island | 1.61e-12 | 98 |
hemolymphoid system | 5.53e-11 | 108 |
musculoskeletal system | 8.65e-11 | 167 |
connective tissue | 4.58e-07 | 371 |
digestive system | 9.80e-07 | 145 |
digestive tract | 9.80e-07 | 145 |
primitive gut | 9.80e-07 | 145 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.