FFCP PHASE1:Hg19::chr10:69834924..69834935,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26091 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24521 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=47bp_to_ENST00000395187_5end | |||
|coexpression_cluster_id=C2068 | |||
|description=CAGE_peak_6_at_HERC4_5end | |||
|id=chr10:69834924..69834935,- | |||
|ontology_enrichment_celltype=CL:0000055!1.36e-11!180;CL:0000057!3.32e-11!75;CL:0002620!7.27e-10!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.27e-17;23!CL:0000515;5.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,6.65e-18,23;CL:0000057,3.38e-11,76;CL:0000048,2.95e-08,427;CL:0000723,6.74e-08,433;CL:0000034,1.95e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.34e-11;5!DOID:450;3.34e-11;5!DOID:66;3.34e-11;5!DOID:423;3.34e-11;5!DOID:0080000;3.34e-11;5!DOID:11722;3.34e-11;5!DOID:0060084;4.21e-07;3!DOID:127;4.21e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.98e-11,5;DOID:450,1.98e-11,5;DOID:66,1.98e-11,5;DOID:423,1.98e-11,5;DOID:0080000,1.98e-11,5;DOID:11722,1.98e-11,5;DOID:0060084,2.18e-07,3;DOID:127,2.18e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002204!1.54e-08!167;UBERON:0000468!1.31e-07!659;UBERON:0000467!5.01e-07!625;UBERON:0000480!7.37e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.34e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.47e-09,41;UBERON:0002199,4.60e-08,46;UBERON:0002416,4.60e-08,46 | |||
|phase1_expression=0,0.642301571672949,0.563817616383885,0,0,0,0,0,0,0.245733936501509,0,0,0,0.247532705920093,0.331397375727916,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0.204000691244253,0,0,0.136874425072884,0.251085279189606,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.868043482863407,1.11957737119962,0.32389366601898,0.515151135268373,0.581592955118259,0,0,0.464858073811369,0,0.309706370895104,2.3015391385772,0.512321413058201,1.6553756092201,0.344745680736619,0,0,0.376484679085209,0.272906150057846,0.898893937780338,0.612167784741805,0.641858054152187,0,0.989553900560148,0.797854630486527,0.426224750532694,0,0.56738522469114,0,0.502497330513487,1.0429658368404,0.65156653411535,0,0,0.316462387440884,0.633765858935825,0.425208599930087,0.628975936525128,0.22465726229299,0.450530678524519,0.64290234678832,0.285012743741249,0.99458338599545,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0.443067789167242,0,0,0,0.164437904603676,0.276350017785848,0,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,2.01210257911091,0,5.42158728576849,0,2.31754430337318,0,0.486634870302636,0.472674085820339,0.443458794925128,0.351339142772504,0.261958150995425,0,0,1.29818957461873,0.348259474598534,0.398873881556595,0,0,0,0,0.860234595106124,0.347140501607594,0.56530794192401,0,0.275118041940067,0,0.258416759169329,1.06729878806013,1.33888245105868,0.402829317109147,0,0.24406205754817,0,0,0.357198913136319,0.44905874525234,0.112611480483322,0,0,0.183201743930407,1.31780417436063,0,0.436094052142534,0.993943903390637,0.886413581652058,3.83986624358335,2.29469296599051,1.06400514659507,1.12135520028461,0,0.24666754841716,0,0.134710672069688,0.980771418680752,0.302714855289863,0,0.468642863667593,0.624320153660641,0,1.49448680551801,0.352303495931295,0.161872944368132,0.561803226808994,1.63323337003915,0.61417158655884,0.619954687054593,1.18800285728205,0.494533858557114,0,0,0.841680569770331,0.875829639103749,3.87889761677856,2.19488810440419,0.612975591598039,0.901428353439581,0.340296549480063,10.404598869954,1.70845911054854,2.11931901159562,11.4034616512073,3.81294358182224,3.60696756063881,1.48893485065272,4.55696097051419,0.876933046450788,8.83518209854401,1.19664868234989,0.323292113637624,9.58525899794859,5.74286959897549,4.23901480776219,0.386521706326594,0.272746120590835,0,0.487894824518382,0.132529768321485,0.348581828608555,0,0.252320850875628,0,0,0,0,0.464367928031979,0,0.591534000199219,0.505754070234305,1.44606617930089,0.330881918197182,0.871517776369625,0.71181185733329,0.674156540800822,1.17732879075208,0.38474715694639,0,0,0.4115740113314,0,0,0,2.36315962672562,0,0.368965315629341,0.343135620597051,0,0,0.301586917234893,0.462942225792648,0.325808305310325,1.03993478527958,0,0.115930404975077,0.117408694235822,0.288732895522148,0,0.570762456703795,0,0,0.492434012174795,1.63802985597466,1.0404181360211,0,0.839910640994298,0.425325291727159,0.53735113621709,0.290633938513962,0,0.985326475791887,0.176096868026452,0.621984346622316,0.288239906833923,0.12624243342638,0.253991577168676,0.763976851116555,0,0,0.308482478109971,0.901029173531752,0.285826432630578,0.112131084345361,0,0.1466765716419,0.775630294546667,0,0,0.26593811658487,3.12022310734098,0.771622122786426,0,1.0656887160644,0.428933980974443,0,0.823240336780769,0.325736184293735,0.710783897485092,0,1.20575750823834,0.871533458600294,0.599837947092342,0,0.502257091432126,4.21667878966063,0.718874566474748,1.14861935834114,0,2.75084482668401,3.08214483825575,1.07436577943937,0.112085143993527,0.394061520403854,0.215627574859517,0.256686072559497,0.254094624222463,0,0,0.335032530668698,1.27587750330633,0,5.9832291840805,0.414415513436035,0.36807447515742,0,0,1.03985430765404,1.78428988797162,1.10391690523754,0.819989904948992,0.300946099727719,0,0,2.65690239414175,1.29058417979192,1.82455590382974,0.195801157462741,0,0.413536052245775,0.215714200818617,0.213455115606889,0.606255142892519,0,0.30239029332968,0.496215615637554,0.460385919864187,0,0.384417447767103,0,0.160853921143607,0,0.308419387605311,0.710246901252508,0.9033987161519,0.519254429183621,0.464841513839837,0.241718899183244,0,0.0920809889358963,1.49258782613989,0.910455840033585,1.18011973463482,0.451199612907412,0.462092022626489,0,0,0.105551628892876,0,0.340187410553031,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0.9273691048295,0,0.082509499920588,0,0,0,0.193341436584244,0.308097234229289,0.15350367472613,0.551346289938122,1.07420244868274,0.290033387828457,0.340906509664404,0.267096106940212,0.330569830721956,0.576570202095319,0.765676274967505,0.10115778085555,2.32422774648643,3.46293581513704,1.3940745403212,0.308033580176089,1.06461206063404,0.869932992075073,0.55597265731176,0.858749320451947,0.372158369359667,0.316379424718726,0.953150969619124,0.511795582622668,0,0,0,1.07923474549989,0.8236110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| |||
|short_description=p6@HERC4 | |||
}} |
Revision as of 03:10, 11 January 2014
Short description: | p6@HERC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HERC4_5end |
Coexpression cluster: | C2068_Fibroblast_Chondrocyte_leiomyoma_spindle_mesenchymal_basal_mesothelioma |
Association with transcript: | 47bp_to_ENST00000395187_5end |
EntrezGene: | HERC4 |
HGNC: | 24521 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 6.65e-18 | 23 |
fibroblast | 3.38e-11 | 76 |
multi fate stem cell | 2.95e-08 | 427 |
somatic stem cell | 6.74e-08 | 433 |
stem cell | 1.95e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.47e-09 | 41 |
integument | 4.60e-08 | 46 |
integumental system | 4.60e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.98e-11 | 5 |
myotonic disease | 1.98e-11 | 5 |
muscle tissue disease | 1.98e-11 | 5 |
myopathy | 1.98e-11 | 5 |
muscular disease | 1.98e-11 | 5 |
myotonic dystrophy | 1.98e-11 | 5 |
cell type benign neoplasm | 2.18e-07 | 3 |
leiomyoma | 2.18e-07 | 3 |