FFCP PHASE1:Hg19::chr12:133405393..133405404,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2802 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4426 | |||
|TSSclassifier=strong | |||
|UniProt=Q08378 | |||
|association_with_transcript=21bp_to_ENST00000545875,NM_001172557_5end | |||
|description=CAGE_peak_3_at_GOLGA3_5end | |||
|id=chr12:133405393..133405404,- | |||
|ontology_enrichment_celltype=CL:0000055!2.73e-21!180;CL:0000057!1.31e-16!75;CL:0000222!3.92e-12!119;CL:0000144!1.30e-11!625;CL:0000192!1.82e-11!42;CL:0000514!1.82e-11!42;CL:0000548!9.47e-11!679;CL:0000004!9.47e-11!679;CL:0000255!9.47e-11!679;CL:0000220!1.37e-10!246;CL:0002371!1.49e-10!591;CL:0002321!2.60e-10!248;CL:0000012!3.14e-10!682;CL:0000680!6.57e-10!57;CL:0000056!6.57e-10!57;CL:0000355!6.57e-10!57;CL:0000187!3.30e-09!54;CL:0000183!3.36e-09!59;CL:0000359!2.17e-08!32;CL:0000003!4.64e-07!722;CL:0000393!8.69e-07!60;CL:0000211!8.69e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000057;2.82e-08;73!CL:0000359;8.53e-08;32!CL:0002334;2.32e-07;12!CL:0000192;2.33e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.60e-19,76;CL:0000192,9.72e-12,43;CL:0000514,9.72e-12,43;CL:0000222,4.09e-11,121;CL:0000680,1.13e-09,58;CL:0000056,1.13e-09,58;CL:0000355,1.13e-09,58;CL:0000048,1.44e-09,427;CL:0000723,2.97e-09,433;CL:0000187,7.72e-09,55;CL:0000359,1.55e-08,32;CL:0000034,1.75e-08,441;CL:0000136,1.28e-07,15;CL:0002321,1.77e-07,250;CL:0002334,2.77e-07,12;CL:0000393,3.41e-07,61;CL:0000211,3.41e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;2.33e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.35e-13!365;UBERON:0002049!6.80e-12!79;UBERON:0007798!6.80e-12!79;UBERON:0000055!2.11e-11!69;UBERON:0001637!6.28e-11!42;UBERON:0003509!6.28e-11!42;UBERON:0004572!6.28e-11!42;UBERON:0000490!1.31e-10!138;UBERON:0003914!6.59e-10!118;UBERON:0001981!2.81e-09!60;UBERON:0007500!2.81e-09!60;UBERON:0004537!2.81e-09!60;UBERON:0006965!2.81e-09!60;UBERON:0004872!3.31e-09!84;UBERON:0002100!4.12e-09!216;UBERON:0000914!4.66e-09!83;UBERON:0002329!4.66e-09!83;UBERON:0003077!4.66e-09!83;UBERON:0003059!4.66e-09!83;UBERON:0007282!4.66e-09!83;UBERON:0009618!4.66e-09!83;UBERON:0007285!4.66e-09!83;UBERON:0005256!9.80e-09!143;UBERON:0000119!1.36e-08!312;UBERON:0004573!1.90e-08!33;UBERON:0004571!1.90e-08!33;UBERON:0000483!3.25e-08!309;UBERON:0001134!4.76e-08!61;UBERON:0002036!4.76e-08!61;UBERON:0003082!4.76e-08!61;UBERON:0002385!8.80e-08!63;UBERON:0001015!8.80e-08!63;UBERON:0000383!8.80e-08!63;UBERON:0004535!1.39e-07!110;UBERON:0004111!1.44e-07!241;UBERON:0003102!1.77e-07!95;UBERON:0000486!1.97e-07!82;UBERON:0004290!2.12e-07!70;UBERON:0000477!3.52e-07!286;UBERON:0002199!3.63e-07!45;UBERON:0002416!3.63e-07!45;UBERON:0000468!6.72e-07!659;UBERON:0001009!7.96e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.11e-08;42!UBERON:0003509;1.11e-08;42!UBERON:0004572;1.11e-08;42!UBERON:0004573;3.57e-08;33!UBERON:0004571;3.57e-08;33!UBERON:0001013;2.82e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.85e-12,42;UBERON:0003509,1.85e-12,42;UBERON:0004572,1.85e-12,42;UBERON:0002049,3.02e-12,78;UBERON:0007798,3.02e-12,78;UBERON:0000055,8.19e-12,68;UBERON:0003914,7.64e-11,117;UBERON:0004872,7.64e-10,83;UBERON:0007500,1.43e-09,59;UBERON:0001981,1.43e-09,59;UBERON:0004537,1.43e-09,59;UBERON:0006965,1.43e-09,59;UBERON:0004573,2.42e-09,33;UBERON:0004571,2.42e-09,33;UBERON:0004535,3.88e-09,109;UBERON:0000490,4.02e-09,148;UBERON:0001009,2.23e-08,112;UBERON:0003102,3.35e-08,99;UBERON:0001134,3.57e-08,62;UBERON:0002036,3.57e-08,62;UBERON:0003082,3.57e-08,62;UBERON:0002199,4.08e-08,46;UBERON:0002416,4.08e-08,46;UBERON:0007524,7.52e-08,73;UBERON:0002329,7.56e-08,71;UBERON:0003059,7.56e-08,71;UBERON:0007282,7.56e-08,71;UBERON:0004290,7.56e-08,71;UBERON:0009618,7.56e-08,71;UBERON:0005256,7.77e-08,122;UBERON:0001013,8.76e-08,14;UBERON:0003077,1.51e-07,72;UBERON:0007285,1.51e-07,72;UBERON:0000486,1.53e-07,83;UBERON:0002385,1.63e-07,64;UBERON:0001015,1.63e-07,64;UBERON:0000383,1.63e-07,64;UBERON:0004111,1.72e-07,240;UBERON:0002100,1.75e-07,199;UBERON:0000119,2.58e-07,309;UBERON:0007503,3.01e-07,78;UBERON:0000483,5.15e-07,306 | |||
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| |||
|short_description=p3@GOLGA3 | |||
}} |
Revision as of 16:49, 11 January 2014
Short description: | p3@GOLGA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GOLGA3_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000545875, NM_001172557_5end |
EntrezGene: | GOLGA3 |
HGNC: | 4426 |
UniProt: | Q08378 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.60e-19 | 76 |
smooth muscle cell | 9.72e-12 | 43 |
smooth muscle myoblast | 9.72e-12 | 43 |
mesodermal cell | 4.09e-11 | 121 |
muscle precursor cell | 1.13e-09 | 58 |
myoblast | 1.13e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.13e-09 | 58 |
multi fate stem cell | 1.44e-09 | 427 |
somatic stem cell | 2.97e-09 | 433 |
muscle cell | 7.72e-09 | 55 |
vascular associated smooth muscle cell | 1.55e-08 | 32 |
stem cell | 1.75e-08 | 441 |
fat cell | 1.28e-07 | 15 |
embryonic cell | 1.77e-07 | 250 |
preadipocyte | 2.77e-07 | 12 |
electrically responsive cell | 3.41e-07 | 61 |
electrically active cell | 3.41e-07 | 61 |