FFCP PHASE1:Hg19::chr12:71551564..71551596,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7103 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11855 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=23bp_to_uc009zrt.1_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_TSPAN8_5end | |||
|id=chr12:71551564..71551596,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000306;4.94e-10;4!CL:0002547;4.94e-10;4!CL:0002595;9.81e-09;5!CL:0002178;1.41e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,3.84e-10,4;CL:0002547,3.84e-10,4;CL:0002595,9.82e-09,5;CL:0002178,1.39e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!6.89e-16!129;UBERON:0004185!6.89e-16!129;UBERON:0007023!5.80e-15!115;UBERON:0001007!2.32e-13!155;UBERON:0001555!2.32e-13!155;UBERON:0007026!2.32e-13!155;UBERON:0000481!4.61e-13!347;UBERON:0004119!1.93e-11!169;UBERON:0000925!1.93e-11!169;UBERON:0006595!1.93e-11!169;UBERON:0003104!2.14e-11!238;UBERON:0009142!2.14e-11!238;UBERON:0005409!3.12e-11!35;UBERON:0000077!1.03e-10!130;UBERON:0000160!1.46e-09!27;UBERON:0000059!1.58e-09!11;UBERON:0002050!8.93e-09!605;UBERON:0005423!8.93e-09!605;UBERON:0004111!1.02e-08!241;UBERON:0000477!1.03e-08!286;UBERON:0000922!1.04e-08!612;UBERON:0000923!2.09e-08!604;UBERON:0005291!2.09e-08!604;UBERON:0006598!2.09e-08!604;UBERON:0002532!2.09e-08!604;UBERON:0000926!2.76e-08!448;UBERON:0004120!2.76e-08!448;UBERON:0006603!2.76e-08!448;UBERON:0001637!3.08e-08!42;UBERON:0003509!3.08e-08!42;UBERON:0004572!3.08e-08!42;UBERON:0000025!3.56e-08!194;UBERON:0001041!4.58e-08!98;UBERON:0000063!1.11e-07!97;UBERON:0004907!1.64e-07!5;UBERON:0001155!3.58e-07!9;UBERON:0000062!4.38e-07!511;UBERON:0000468!5.50e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;2.67e-23;22!UBERON:0004921;2.36e-18;33!UBERON:0000160;1.98e-16;17!UBERON:0000059;2.35e-11;11!UBERON:0004797;4.94e-10;4!UBERON:0000415;4.94e-10;4!UBERON:0007240;4.94e-10;4!UBERON:0005742;4.94e-10;4!UBERON:0005734;4.94e-10;4!UBERON:0004664;4.94e-10;4!UBERON:0004663;4.94e-10;4!UBERON:0000945;8.97e-09;5!UBERON:0010039;8.97e-09;5!UBERON:0003834;9.81e-09;5!UBERON:0001533;9.81e-09;5!UBERON:0004907;1.09e-08;5!UBERON:0004573;4.64e-08;33!UBERON:0004571;4.64e-08;33!UBERON:0001637;5.08e-08;42!UBERON:0003509;5.08e-08;42!UBERON:0004572;5.08e-08;42!UBERON:0001041;7.42e-08;14!UBERON:0001155;1.64e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.08e-20,25;UBERON:0000160,2.00e-16,17;UBERON:0004921,3.72e-12,118;UBERON:0000059,2.37e-11,11;UBERON:0001007,6.20e-11,145;UBERON:0001555,6.20e-11,145;UBERON:0007026,6.20e-11,145;UBERON:0000415,3.84e-10,4;UBERON:0007240,3.84e-10,4;UBERON:0005742,3.84e-10,4;UBERON:0005734,3.84e-10,4;UBERON:0004664,3.84e-10,4;UBERON:0004663,3.84e-10,4;UBERON:0004573,1.03e-09,33;UBERON:0004571,1.03e-09,33;UBERON:0001637,1.95e-09,42;UBERON:0003509,1.95e-09,42;UBERON:0004572,1.95e-09,42;UBERON:0004119,3.99e-09,160;UBERON:0000925,3.99e-09,160;UBERON:0006595,3.99e-09,160;UBERON:0003834,9.82e-09,5;UBERON:0001533,9.82e-09,5;UBERON:0004907,1.11e-08,5;UBERON:0004797,2.25e-08,7;UBERON:0007500,1.53e-07,59;UBERON:0001981,1.53e-07,59;UBERON:0004537,1.53e-07,59;UBERON:0006965,1.53e-07,59;UBERON:0001155,1.63e-07,9;UBERON:0001046,2.64e-07,19 | |||
|phase1_expression=0.181678379270557,0,0.704772020479856,1.0007329835313,0.893922188854576,4.36169262050184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,1.44076983047484,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65924074495618,3.97227542439656,7.74458876021797,2.83734705758686,1.68203280042692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680593098960126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709840800239063,0.337169380156203,0.241011029883482,0.330881918197182,0.217879444092406,0.237270619111097,0.674156540800822,0.588664395376038,0,0,0,0,0,1.26755034821831,0,0,0,128.891883593183,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,1.04007436911366,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0.160853921143607,2.96836132889982,0,0,0,0.519254429183621,0,32.632051389738,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97637867556789,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0.464845549297286,0.31481234683064,0,2.46426864140871,1.59691809095107,0,0,6.5837447901316,0,0.949138274156178,0,0,0,0,0,0.179872457583315,0,0,0.202182481573316,6.34041284692033,0,0,11.2108205230391,0,0,0.141405431953713,0,4.96228809191512,19.2397302819954,8.33056681982149,0,0,1.42037263873893,0.30982349809975,0,0,0,1.426684205925,0,0,0,0,0,0,0.670302275535787,0,6.59006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,172.730718796787,1.61158997199083,0,0,0,0,0,0,0,0.281338832821026,0,0,0,2.39097585901284,59.6773257547279,0.251932747854276,0,0,0,0.629078458031288,0.179021174675609,0,2.26879832964947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67517985728246,0.865554558968364,252.79653049394,390.982435104759,336.066579713494,0,0,0,0.471807930864739,2.40773294189637,0,0,0,0,0.789168805698781,248.030967899761,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,3.67674058898524,2.70430473218887,3.530964653288,0.387956065953678,0,0.90392296312213,0,0,0.0633107959558787,7.62650392665732,0,23.0529234318501,3.79638258206047,197.547961918279,0,0,0,0,0,0,0,0,0,0,0,0,7.30601250413927,0,1.11712960508902,0.687481272035051,0,0.199679000498991,0,0,0.268733889946905,0,0,0,0,0,10.6301680035929,0,0,0,0,0,0,0,0,0.121499113316049,0,7.88057072991982,3.40954822877488,0,1.43429871466276,0,0.714695326373367,0,0,0,5.18532894720761,0,0,0,0,0,1.31897010310274,0,0.129282956361551,0,0,0.704815022316672,3.52398461473392,0.314408610199332,6.62782488555513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457680136793847,0.151230923763239,0,0.887130899937803,0,0,0.310525913752519,0.829412415681711,0,0,0,0,0,0,0.107410557042488,0.464033759878494,1.19428766609585,0,0,0,0,0.192619830407303,3.21662387062389,0,8.61482516946635,0.694567422971502,0,0,0,0.877136198314828,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,79.5667606542794,0,0,0,184.931842853943,0,0,0.256916900385838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98614740251063,0,1.56302802246618,0,0,0.443568258651136,0,0,0,0,0,1.64477330057155,0.496211178389294,0,0,0,0,0.606965604236632,0,0,0,0.171488009437418,0.135939465953663,0,0,1.66847102838104,9.10519877065963,0,39.798647190558,6.39211104356647,0,0,1.28657779517981,0,0,0,0,0,0,0,2.58136415292167,0,0,0,0,0,0,0,7.16496705391274,68.0302021401063,0,3.79852385368114,0,0.485710993059139,0,0,0,0,0,0,658.758613609416,198.014961816585,0.470317296361523,0.735444965261716,9.89841497826829,0.196308467114945,0.297046400327086,1.2679671827502,0,0,0,0,0,0,0.0802413666891683,27.7527827533677,3.21110498383179,0.430018749454354,0,0,0,223.249326697499,0,0,0,0,0,0,0,0,0,0,1.21245917149183,0,0,0.20686599172379,0.213233981900981,0,0,0,0,0.445530107947154,1.21270313374932,0.870866991587845,0.684466602170562,0.673520530145875,3.37094365345579,1.66330178273007,0,0.320182037633146,0,137.971510435717,2.34640942403454,0.366724332548599,0.813792356631477,0,1.20764276154616,0 | |||
|short_description=p1@TSPAN8 | |||
}} |
Revision as of 14:40, 11 January 2014
Short description: | p1@TSPAN8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TSPAN8_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 23bp_to_uc009zrt.1_5end |
EntrezGene: | TSPAN8 |
HGNC: | 11855 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 3.84e-10 | 4 |
fibroblast of the aortic adventitia | 3.84e-10 | 4 |
smooth muscle cell of the subclavian artery | 9.82e-09 | 5 |
epithelial cell of stomach | 1.39e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 4.08e-20 | 25 |
intestine | 2.00e-16 | 17 |
subdivision of digestive tract | 3.72e-12 | 118 |
large intestine | 2.37e-11 | 11 |
digestive system | 6.20e-11 | 145 |
digestive tract | 6.20e-11 | 145 |
primitive gut | 6.20e-11 | 145 |
artery wall | 3.84e-10 | 4 |
tunica adventitia of artery | 3.84e-10 | 4 |
adventitia | 3.84e-10 | 4 |
tunica adventitia of blood vessel | 3.84e-10 | 4 |
aorta tunica adventitia | 3.84e-10 | 4 |
aorta wall | 3.84e-10 | 4 |
systemic artery | 1.03e-09 | 33 |
systemic arterial system | 1.03e-09 | 33 |
artery | 1.95e-09 | 42 |
arterial blood vessel | 1.95e-09 | 42 |
arterial system | 1.95e-09 | 42 |
endoderm-derived structure | 3.99e-09 | 160 |
endoderm | 3.99e-09 | 160 |
presumptive endoderm | 3.99e-09 | 160 |
thoracic segment blood vessel | 9.82e-09 | 5 |
subclavian artery | 9.82e-09 | 5 |
lower digestive tract | 1.11e-08 | 5 |
blood vessel layer | 2.25e-08 | 7 |
epithelial tube open at both ends | 1.53e-07 | 59 |
blood vessel | 1.53e-07 | 59 |
blood vasculature | 1.53e-07 | 59 |
vascular cord | 1.53e-07 | 59 |
colon | 1.63e-07 | 9 |
hindgut | 2.64e-07 | 19 |