FFCP PHASE1:Hg19::chr14:61191018..61191048,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51804 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10890 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc010app.1_5end | |||
|description=CAGE_peak_1_at_SIX4_5end | |||
|id=chr14:61191018..61191048,- | |||
|ontology_enrichment_celltype=CL:0000055!1.18e-12!180;CL:0000066!2.42e-10!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.90e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.71e-16!143;DOID:305!4.43e-15!106;DOID:162!4.52e-07!235;DOID:14566!7.77e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.14e-14,143;DOID:305,9.08e-14,106 | |||
|ontology_enrichment_uberon=UBERON:0000475!3.19e-17!365;UBERON:0000481!5.81e-14!347;UBERON:0002100!5.00e-13!216;UBERON:0003104!2.90e-11!238;UBERON:0009142!2.90e-11!238;UBERON:0004119!3.53e-09!169;UBERON:0000925!3.53e-09!169;UBERON:0006595!3.53e-09!169;UBERON:0000914!7.77e-09!83;UBERON:0002329!7.77e-09!83;UBERON:0003077!7.77e-09!83;UBERON:0003059!7.77e-09!83;UBERON:0007282!7.77e-09!83;UBERON:0009618!7.77e-09!83;UBERON:0007285!7.77e-09!83;UBERON:0000119!1.03e-08!312;UBERON:0000486!1.13e-08!82;UBERON:0001444!1.24e-08!48;UBERON:0005256!1.67e-08!143;UBERON:0003102!2.04e-08!95;UBERON:0001007!4.07e-08!155;UBERON:0001555!4.07e-08!155;UBERON:0007026!4.07e-08!155;UBERON:0000483!4.08e-08!309;UBERON:0000468!8.46e-08!659;UBERON:0000161!1.02e-07!35;UBERON:0001048!1.52e-07!168;UBERON:0004290!3.64e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.71e-08;31!UBERON:0001015;1.71e-08;31!UBERON:0000383;1.71e-08;31!UBERON:0001134;3.05e-07;16!UBERON:0002036;3.05e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,5.55e-10,199;UBERON:0000486,2.65e-09,83;UBERON:0000161,1.88e-08,36;UBERON:0007524,2.96e-08,73;UBERON:0001444,4.76e-08,49;UBERON:0002329,6.81e-08,71;UBERON:0003059,6.81e-08,71;UBERON:0007282,6.81e-08,71;UBERON:0004290,6.81e-08,71;UBERON:0009618,6.81e-08,71;UBERON:0003102,6.99e-08,99;UBERON:0003077,7.40e-08,72;UBERON:0007285,7.40e-08,72;UBERON:0005256,7.71e-08,122;UBERON:0007503,7.74e-07,78;UBERON:0000033,8.49e-07,56;UBERON:0001134,8.53e-07,62;UBERON:0002036,8.53e-07,62;UBERON:0003082,8.53e-07,62 | |||
|phase1_expression=1.09007027562334,0.642301571672949,0.986680828671798,1.0007329835313,1.34088328328186,4.36169262050184,0,0.631719873426831,0.261185628199839,1.47440361900905,2.09340350391728,0.655324116390517,1.31883489114227,11.5102708252843,17.8954582893075,4.03395087871065,1.20538905604795,2.19093027116212,3.90346239032406,6.52541607806976,4.08001382488506,4.07491137921514,1.43117993565528,2.32686522623903,2.13422487311165,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,0,2.10844143144775,2.21852406100073,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,2.1686349143074,4.51204119572301,2.89693037921647,1.5905718941022,8.75942766544745,6.99557647014102,5.98669373148923,7.64162635530197,0.654895377488563,0.728590576585084,1.48313777113772,0,0,0,0,0,0,1.19257444420023,1.72046919021225,0.347140501607594,2.26123176769604,0,0.275118041940067,0.626984899610432,0.516833518338658,2.13459757612026,1.00416183829401,0,0.760272105718513,0.488124115096339,0,1.62028389576352,0.625098097988558,1.79623498100936,0.337834441449967,0,0,1.28241220751285,0,0,0.872188104285069,2.98183171017191,1.39293562831038,1.72131935057184,3.15520282823695,0.709336764396714,2.80338800071154,1.06748995729705,1.72667283892012,1.8672662123986,0.269421344139376,0.490385709340376,5.90293967815232,8.64263886719998,3.04617861383936,2.18512053781224,1.71141546463335,1.64393548606981,3.28816596202542,1.94247533241758,2.66856532734272,2.44985005505872,4.17636678860011,1.65321249881225,2.37600571456411,3.21447008062124,0,0,4.20840284885166,4.62938523526267,2.77064115484183,1.31693286264251,1.83892677479412,2.25357088359895,0.680593098960126,1.79389635688862,1.2813443329114,1.69545520927649,1.20036438433761,2.16410311400722,3.09168648054755,2.79175284497385,2.02531598689519,1.46155507741798,2.52433774244115,1.84099797284599,2.26304479546337,1.42003837006646,1.61203357164224,2.54340888465731,0.386521706326594,0.545492241181669,2.00763216772303,5.00092195131341,5.4337205011809,3.36962434321603,4.04278114559945,5.2987378683882,2.18986415445498,1.56449532329816,3.21620469096443,1.38134921352481,5.57241513638375,2.88751792667834,1.41968160047813,1.18009283054671,1.92808823906786,1.54411561825352,1.30727666455444,1.18635309555548,1.48314438976181,0.784885860501384,1.53898862778556,0,7.01208869017229,0.4115740113314,0,0,0,0,0,1.8448265781467,3.77449182656756,0.548751427043128,1.1240175325762,0.703702806881416,1.38882667737794,4.56131627434455,2.07986957055916,2.88662684050547,1.85488647960123,8.21860859650752,0.288732895522148,0.462985512576611,0.380508304469197,7.90204397959275,7.72637545885385,0,0,0,0,1.17587489739202,1.13420077793909,1.97028749946266,0.581267877027924,3.06706143332169,0,0.088048434013226,0.207328115540772,0,0.25248486685276,0.063497894292169,0,0,1.71072446022705,0,0.300343057843917,0,2.69114602428866,3.92364061949952,4.18028229179415,1.03417372606222,0,0,1.06375246633948,4.16029747645464,1.80045161983499,4.25547396069835,2.1313774321288,0.714889968290738,0,0,0.65147236858747,0.355391948742546,1.58390374586686,0.904318131178758,1.74306691720059,0.799783929456456,0,0,0,0.479249710983165,1.14861935834114,7.13184525203592,2.17171960001369,6.57524232161227,1.96967059563885,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,24.9063728189854,5.50187573165645,7.5954206635926,3.95144636908534,4.81758269752337,3.15404830067869,6.32563640960651,4.8151375956435,6.82222512167955,4.1389228517002,1.32845119707087,4.79359838208428,5.47366771148922,7.04884166865866,3.0882908142977,0,0,0,0.909382714338778,1.66435439510497,0.30239029332968,2.72918588600655,1.2276957863045,0.841980283299221,1.53766979106841,1.53512174720011,1.93024705372329,2.96836132889982,1.85051632563187,1.06537035187876,0.821271560138091,1.03850885836724,0.929683027679674,2.05461064305758,1.00253235151642,2.94659164594868,3.21480454860899,3.27764102412091,2.75361271414791,0.902399225814824,1.38627606787947,1.56869953835371,2.92278449306521,1.47772280450026,0,0.340187410553031,1.94324324491925,0,1.62567862526312,0.501689773854853,0,0,0.895499018888713,0,0,1.79515087581472,1.96808787419823,0.650756789328606,2.26690225624989,1.00726411300178,0.907604499126468,0,0,0,7.25030387190915,1.23238893691716,3.53058451870098,3.44591431211326,3.43744783578476,3.19036726611303,3.23861184181183,6.58837063785856,1.15699440752685,2.11409074101617,2.67986696238627,2.73126008309985,2.78907329578371,4.09256050879832,8.3644472419272,0.616067160352178,2.12922412126809,4.34966496037536,1.66791797193528,2.00374841438788,4.09374206295634,3.79655309662471,0.571890581771475,2.04718233049067,14.1219866051194,1.90921948755562,0,2.33834194858309,1.37268514868027,4.00562167975334,1.01091240786658,1.58510321173008,0.842516912477962,2.43816869544795,1.46228093778771,2.11300293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| |||
|short_description=p1@SIX4 | |||
}} |
Revision as of 20:24, 11 January 2014
Short description: | p1@SIX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SIX4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc010app.1_5end |
EntrezGene: | SIX4 |
HGNC: | 10890 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.90e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
trunk | 5.55e-10 | 199 |
multilaminar epithelium | 2.65e-09 | 83 |
orifice | 1.88e-08 | 36 |
dense mesenchyme tissue | 2.96e-08 | 73 |
subdivision of head | 4.76e-08 | 49 |
somite | 6.81e-08 | 71 |
presomitic mesoderm | 6.81e-08 | 71 |
presumptive segmental plate | 6.81e-08 | 71 |
dermomyotome | 6.81e-08 | 71 |
trunk paraxial mesoderm | 6.81e-08 | 71 |
surface structure | 6.99e-08 | 99 |
paraxial mesoderm | 7.40e-08 | 72 |
presumptive paraxial mesoderm | 7.40e-08 | 72 |
trunk mesenchyme | 7.71e-08 | 122 |
epithelial vesicle | 7.74e-07 | 78 |
head | 8.49e-07 | 56 |
skeletal muscle tissue | 8.53e-07 | 62 |
striated muscle tissue | 8.53e-07 | 62 |
myotome | 8.53e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.14e-14 | 143 |
carcinoma | 9.08e-14 | 106 |