FFCP PHASE1:Hg19::chr16:30102849..30102865,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6911 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11605 | |||
|TSSclassifier=weak | |||
|UniProt=O95947 | |||
|association_with_transcript=-279bp_to_ENST00000279386_5end | |||
|description=CAGE_peak_2_at_TBX6_5end | |||
|id=chr16:30102849..30102865,- | |||
|ontology_enrichment_celltype=CL:0002322!5.23e-10!5;CL:0000240!4.17e-08!6;CL:0000311!4.17e-08!6;CL:0000079!4.17e-08!6;CL:0000237!4.17e-08!6;CL:0000036!4.17e-08!6;CL:0000357!4.17e-08!6;CL:0000114!4.17e-08!6;CL:0000066!7.41e-08!254;CL:0002328!3.76e-07!3;CL:0002076!6.77e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000575;3.28e-19;2!CL:0002537;3.15e-17;5!CL:0002328;6.55e-13;3!CL:0002336;2.62e-10;1!CL:0002261;2.62e-10;1!CL:0002170;2.62e-10;1!CL:0000244;6.53e-10;4!CL:0000731;6.53e-10;4!CL:0002202;1.56e-09;9!CL:0002632;1.56e-09;9!CL:0000240;6.88e-07;6!CL:0000311;6.88e-07;6!CL:0000079;6.88e-07;6!CL:0000237;6.88e-07;6!CL:0002368;9.52e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,3.44e-19,2;CL:0002537,2.60e-17,5;CL:0002328,4.29e-13,3;CL:0002336,4.75e-10,1;CL:0002261,4.75e-10,1;CL:0002170,4.75e-10,1;CL:0000244,7.83e-10,4;CL:0000731,7.83e-10,4;CL:0002202,1.11e-09,9;CL:0002632,1.11e-09,9;CL:0002368,7.56e-07,13;CL:0000240,9.81e-07,6;CL:0000311,9.81e-07,6;CL:0000079,9.81e-07,6;CL:0000237,9.81e-07,6;CL:0000036,9.81e-07,6;CL:0000357,9.81e-07,6;CL:0000114,9.81e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0008425;6.73e-11;1!UBERON:0009143;9.37e-11;1!CL:0000357;6.88e-07;6!CL:0000114;6.88e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.91e-13!169;UBERON:0000925!4.91e-13!169;UBERON:0006595!4.91e-13!169;UBERON:0004921!3.06e-10!129;UBERON:0004185!3.06e-10!129;UBERON:0001007!3.33e-10!155;UBERON:0001555!3.33e-10!155;UBERON:0007026!3.33e-10!155;UBERON:0000077!7.07e-09!130;UBERON:0005178!1.92e-08!34;UBERON:0002224!1.92e-08!34;UBERON:0005631!2.00e-08!14;UBERON:0000158!2.00e-08!14;UBERON:0005181!4.21e-08!35;UBERON:0000305!9.85e-08!7;UBERON:0005911!1.09e-07!82;UBERON:0000065!2.20e-07!53;UBERON:0004815!3.76e-07!3;UBERON:0002031!3.76e-07!3;UBERON:0000365!8.40e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;6.55e-13;3!UBERON:0002031;6.55e-13;3!UBERON:0000305;1.80e-12;7!UBERON:0002372;9.37e-11;1!UBERON:0001961;9.37e-11;1!UBERON:0001744;9.37e-11;1!UBERON:0001042;9.37e-11;1!UBERON:0001735;9.37e-11;1!UBERON:0000996;2.62e-10;1!UBERON:0000964;4.44e-10;4!UBERON:0010409;4.44e-10;4!UBERON:0007196;8.91e-10;15!UBERON:0001558;8.91e-10;15!UBERON:0005631;6.94e-09;10!UBERON:0000158;6.94e-09;10!UBERON:0005178;1.93e-08;34!UBERON:0002224;1.93e-08;34!UBERON:0000365;4.21e-08;5!UBERON:0002185;4.21e-08;5!UBERON:0005181;7.85e-08;35!UBERON:0005910;6.88e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,4.29e-13,3;UBERON:0002031,4.29e-13,3;UBERON:0000305,1.57e-12,7;UBERON:0004871,4.96e-11,8;UBERON:0002372,9.84e-11,1;UBERON:0001961,9.84e-11,1;UBERON:0001744,9.84e-11,1;UBERON:0001735,9.84e-11,1;UBERON:0000996,1.43e-10,1;UBERON:0000964,4.55e-10,4;UBERON:0010409,4.55e-10,4;UBERON:0004348,4.55e-10,4;UBERON:0005427,4.55e-10,4;UBERON:0007196,7.57e-10,15;UBERON:0001558,7.57e-10,15;UBERON:0005178,2.95e-09,34;UBERON:0002224,2.95e-09,34;UBERON:0005181,5.60e-09,35;UBERON:0002185,3.27e-08,5;UBERON:0000365,4.86e-08,5;UBERON:0000915,6.20e-08,52;UBERON:0005910,7.75e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0.873765488520689,0.263766978228454,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,1.83884244895785,0.30120591877825,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0.130979075497713,1.45718115317017,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0.487894824518382,0.927708378250397,0.348581828608555,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0.109750285408626,1.1240175325762,0.301586917234893,1.01847289674383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460404944679482,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,0,1.63577591633371,0.670302275535787,0,0,0.43050537267123,0,1.33029046061003,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,2.62618933211459,1.48482340416319,5.22173193568695,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0.295930216910801,0,0,0,0,0,0,9.00837999960816,0,0.227586896570999,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0.217294743844016,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0,0,0,0,0,0,0,3.87956065953678,0.0882561266915003,0,0,0,0,0,0.0801588202515337,0,0,0.432271251462318,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.550157746388935,0.415440338029185,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9337051562167,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53867458491389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,2.34454203369928,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.455324382702595,0,0,0,0,0,0,0,0.470958557103084,0,0.560544326627578,0,0,0,0.428859265059938,0.316027223465453,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0.227336094654718,0.535928260312357,0,0,1.27940389140589,0.23806443146374,0.0645889098360061,0.186224142887574,0,0.0636471582781649,0,0.217716747896961,0.342233301085281,3.09819443867103,1.2192774916755,0.665320713092027,0.162806537221949,0,0,0,0,0,0,1.99727032255654,0.402547587182052,0 | |||
|short_description=p2@TBX6 | |||
}} |
Revision as of 03:08, 12 January 2014
Short description: | p2@TBX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TBX6_5end |
Coexpression cluster: | NA |
Association with transcript: | -279bp_to_ENST00000279386_5end |
EntrezGene: | TBX6 |
HGNC: | 11605 |
UniProt: | O95947 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 3.44e-19 | 2 |
amnion mesenchymal stem cell | 2.60e-17 | 5 |
bronchial epithelial cell | 4.29e-13 | 3 |
buccal mucosa cell | 4.75e-10 | 1 |
endothelial cell of viscerocranial mucosa | 4.75e-10 | 1 |
keratinized cell of the oral mucosa | 4.75e-10 | 1 |
transitional epithelial cell | 7.83e-10 | 4 |
urothelial cell | 7.83e-10 | 4 |
epithelial cell of tracheobronchial tree | 1.11e-09 | 9 |
epithelial cell of lower respiratory tract | 1.11e-09 | 9 |
respiratory epithelial cell | 7.56e-07 | 13 |
stratified squamous epithelial cell | 9.81e-07 | 6 |
keratin accumulating cell | 9.81e-07 | 6 |
stratified epithelial cell | 9.81e-07 | 6 |
keratinizing barrier epithelial cell | 9.81e-07 | 6 |
epithelial fate stem cell | 9.81e-07 | 6 |
stratified epithelial stem cell | 9.81e-07 | 6 |
surface ectodermal cell | 9.81e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 4.29e-13 | 3 |
epithelium of bronchus | 4.29e-13 | 3 |
amnion | 1.57e-12 | 7 |
somatic layer of lateral plate mesoderm | 4.96e-11 | 8 |
tonsil | 9.84e-11 | 1 |
mucosa-associated lymphoid tissue | 9.84e-11 | 1 |
lymphoid tissue | 9.84e-11 | 1 |
tonsillar ring | 9.84e-11 | 1 |
vagina | 1.43e-10 | 1 |
cornea | 4.55e-10 | 4 |
eye surface | 4.55e-10 | 4 |
optic eminence | 4.55e-10 | 4 |
corneal primordium | 4.55e-10 | 4 |
tracheobronchial tree | 7.57e-10 | 15 |
lower respiratory tract | 7.57e-10 | 15 |
thoracic cavity element | 2.95e-09 | 34 |
thoracic cavity | 2.95e-09 | 34 |
thoracic segment organ | 5.60e-09 | 35 |
bronchus | 3.27e-08 | 5 |
urothelium | 4.86e-08 | 5 |
thoracic segment of trunk | 6.20e-08 | 52 |
transitional epithelium | 7.75e-07 | 6 |