FFCP PHASE1:Hg19::chr17:40913210..40913221,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10266 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9844 | |||
|TSSclassifier=strong | |||
|UniProt=O60895 | |||
|association_with_transcript=0bp_to_ENST00000253796,NM_005854,uc002ibg.2,uc002ibh.2,uc010cyt.2_5end | |||
|coexpression_cluster_id=C1435 | |||
|description=CAGE_peak_3_at_RAMP2_5end | |||
|id=chr17:40913210..40913221,+ | |||
|ontology_enrichment_celltype=CL:0000115!5.27e-12!35;CL:0002139!9.26e-11!24;CL:0002078!1.01e-09!44;CL:0000213!3.63e-08!57;CL:0000215!3.63e-08!57;CL:0000071!7.38e-07!18;CL:0002546!7.38e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.79e-12;24!CL:0000115;1.03e-11;36!CL:0002138;3.75e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.48e-13,36;CL:0002139,1.14e-11,24;CL:0005020,9.16e-10,6;CL:0002138,9.16e-10,6;CL:0005022,9.16e-10,6;CL:0002078,1.65e-09,45;CL:0000213,1.55e-08,58;CL:0000215,1.55e-08,58 | |||
|ontology_enrichment_development_v019=CL:0005022;3.75e-10;6!UBERON:0004872;2.59e-08;7!UBERON:0006603;1.24e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.06e-29!115;UBERON:0004111!3.03e-15!241;UBERON:0000025!2.30e-14!194;UBERON:0000477!3.38e-13!286;UBERON:0000483!1.68e-10!309;UBERON:0000119!2.43e-10!312;UBERON:0002346!3.80e-09!90;UBERON:0000468!3.94e-08!659;UBERON:0003075!4.76e-08!86;UBERON:0007284!4.76e-08!86;UBERON:0001049!8.73e-08!57;UBERON:0005068!8.73e-08!57;UBERON:0006241!8.73e-08!57;UBERON:0007135!8.73e-08!57;UBERON:0003914!1.04e-07!118;UBERON:0003103!4.36e-07!69;UBERON:0001986!7.38e-07!18;UBERON:0004638!7.38e-07!18;UBERON:0004852!7.38e-07!18;UBERON:0000055!8.24e-07!69;UBERON:0004872!9.05e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;5.94e-10;49!UBERON:0002465;2.23e-07;10!UBERON:0001473;2.37e-07;8!UBERON:0004536;2.37e-07;8!UBERON:0006558;2.37e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.72e-19,114;UBERON:0002465,3.21e-07,10;UBERON:0000055,3.95e-07,68;UBERON:0001473,4.50e-07,8;UBERON:0004536,4.50e-07,8;UBERON:0006558,4.50e-07,8;UBERON:0003103,5.96e-07,68 | |||
|phase1_expression=0.908391896352783,0.214100523890983,0.986680828671798,1.0007329835313,4.91657203870017,0.872338524100369,0,3.15859936713415,5.22371256399677,0.245733936501509,0.697801167972428,0,0,0,0,0.672325146451775,1.20538905604795,0.730310090387373,1.46379839637152,0.369363174230364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0.670700859703636,0.767175371061182,0,0,0.289693037921647,0,0,0,0.221729397462564,0.175669571386252,3.40545596294053,0,0,0,0,0,0,0.571994910780128,0.371457501329565,0.993812036833525,0,1.73570250803797,0.56530794192401,0.838998872419812,1.37559020970034,0.208994966536811,1.03366703667732,1.06729878806013,4.35136796594071,4.02829317109147,0,8.7862340717341,1.10298924103761,2.43042584364528,2.41109266367015,2.69435247151404,3.60356737546631,0,0.949265659568129,0.549605231791222,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0.74000264525148,0.311211035399766,1.0776853765575,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.340296549480063,0,0,0.423863802319124,0,0.206105058476878,0,0,0.168776332241266,0.194874010322397,0,0,0.646584227275248,0,0.201504196455281,0.169560592310488,0,0,0,0.365921118388786,0.132529768321485,0,0.414644220061482,1.00928340350251,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69077727312324,9.81692416624121,0.8231480226628,1.47008711385542,0,0,1.77236972004421,0,0.737930631258681,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0.463721619900307,0,7.36268883581476,6.48179717607255,6.27838702374174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,0.763976851116555,0,0,0.205654985406647,0.901029173531752,0,0.336393253036082,0,0,0,0,2.535908257668,0,0,0,0,0.532844358032199,0,0.542621605391443,0,0.325736184293735,0.355391948742546,0,0,0,1.09970290300263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670065061337395,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0.178428988797162,0,0,0,0,3.10419213877515,0,0,0,0.391602314925481,0.686286847621712,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0.561320188866147,0.512556597022804,0,0,0,0,0.532685175939381,0.0821271560138091,0,0,2.05461064305758,0,0,0.114814448164607,0,0.131124414959424,0,0.385076685522074,0.784349769176855,0,0,5.68666920354483,0.680374821106063,2.15915916102139,32.3877230649608,0.270946437543853,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0,0,0,0,1.64865618636356,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0.460511024178389,0,0,0,0.340906509664404,0.623224249527161,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0.379473173765715,0,0,0,0,1.12972560932135,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0.191505370132367,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,5.27429445378818,0,0,0,0,0.296964680832639,0,0,0.422008249231538,0,0,0.422250816255987,2.39097585901284,1.38141957765574,1.25966373927138,0,0,0,0,0,0,2.66337195219721,0,0,0,0.556608588971108,1.99613798001194,0,0,4.34999745260876,0,0,0,0,0,0.520874984799877,0.885741385813839,0.361789315876224,0,0.221158519862449,0.591095237907095,1.75508317723178,0,0,2.92410982314429,0,0,0.179515288819544,0.54323685961004,1.5950057986596,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,1.41353071433941,0,0,1.14994833854341,2.4441205797345,0,0,0,1.21322039365219,1.60515529459758,0.468528891450678,0,0,0,0.394584402849391,2.41981432097328,1.83643656978294,5.37085926842148,0,0,0,0,0,0,0.284609546029793,0,0,0,0,3.66926003308263,0,0,0,0,3.006659511141,0,4.97157629717171,0,0,0.569797163602908,0.195551382734803,0,1.70762395791482,0,0,0,2.9171149636534,0,0.124252535565433,0,0,0,0.101998217636322,0.288950589901519,0.600420288709789,0.821432273351958,0,0,0,4.18923601908381,2.06244381610515,1.43574604915363,2.59582700648688,1.71690419254628,2.23171457441873,3.89664140423012,0.720599767084807,0,0.236349546921671,0.247247575143499,0.404421263125109,0,0,0.795229689809303,0.136203406111576,0.160753148465019,0.412618309791701,0,0,0,0.485996453264197,0,1.57611414598396,4.24882163893485,0,0,0,3.57347663186684,3.97255182219259,0,0,0,0,4.7892076624995,0,0,1.81299346432201,2.05173127149315,0,0.387848869084652,0.66116300871345,0.171086837884329,0,4.59185874041087,7.3886023396843,4.55662960881915,0.992332043623902,0,0,0,1.63205341010842,1.7548292581589,0.919036730290385,4.91808946064707,0,0,0.244052529803926,0,0,0.443716206147409,1.4903136705932,0.415045904808692,0,1.21319294033318,0,0,0,0.144921028610825,0,0.467426619694449,0,0.189403005275089,0,0.889811221596536,0,0,0,0.591420599958536,0,0.449803112163605,0.310525913752519,0,0,0,2.10360652596106,0,0,0.727394636810238,0.96669501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| |||
|short_description=p3@RAMP2 | |||
}} |
Revision as of 15:30, 20 January 2014
Short description: | p3@RAMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RAMP2_5end |
Coexpression cluster: | C1435_Renal_lung_retina_Mesenchymal_placenta_Hepatic_uterus |
Association with transcript: | 0bp_to_ENST00000253796, NM_005854, uc002ibg.2, uc002ibh.2, uc010cyt.2_5end |
EntrezGene: | RAMP2 |
HGNC: | 9844 |
UniProt: | O60895 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.48e-13 | 36 |
endothelial cell of vascular tree | 1.14e-11 | 24 |
lymphangioblast | 9.16e-10 | 6 |
endothelial cell of lymphatic vessel | 9.16e-10 | 6 |
vascular lymphangioblast | 9.16e-10 | 6 |
meso-epithelial cell | 1.65e-09 | 45 |
lining cell | 1.55e-08 | 58 |
barrier cell | 1.55e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.72e-19 | 114 |
lymphoid system | 3.21e-07 | 10 |
vessel | 3.95e-07 | 68 |
lymphatic vessel | 4.50e-07 | 8 |
lymph vasculature | 4.50e-07 | 8 |
lymphatic part of lymphoid system | 4.50e-07 | 8 |
compound organ | 5.96e-07 | 68 |