FFCP PHASE1:Hg19::chr18:55470341..55470410,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5205 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3706 | |||
|TSSclassifier=strong | |||
|UniProt=O43520 | |||
|association_with_transcript=-14bp_to_ENST00000536015,NM_005603_5end | |||
|coexpression_cluster_id=C3730 | |||
|description=CAGE_peak_2_at_ATP8B1_5end | |||
|id=chr18:55470341..55470410,- | |||
|ontology_enrichment_celltype=CL:0000066!7.55e-15!254;CL:0002076!8.14e-08!43;CL:0000223!3.92e-07!59;CL:0000076!6.26e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002076;5.37e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.52e-11,253;CL:0002076,1.95e-08,42;CL:0000223,7.52e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;3.00e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.23e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000468!6.57e-19!659;UBERON:0004119!9.77e-19!169;UBERON:0000925!9.77e-19!169;UBERON:0006595!9.77e-19!169;UBERON:0001007!1.53e-15!155;UBERON:0001555!1.53e-15!155;UBERON:0007026!1.53e-15!155;UBERON:0000467!1.96e-14!625;UBERON:0000480!2.40e-14!626;UBERON:0000481!1.42e-13!347;UBERON:0004111!1.56e-13!241;UBERON:0000475!2.55e-13!365;UBERON:0002100!1.30e-12!216;UBERON:0000477!1.64e-12!286;UBERON:0003104!2.72e-12!238;UBERON:0009142!2.72e-12!238;UBERON:0003102!4.47e-11!95;UBERON:0000483!2.63e-10!309;UBERON:0000161!3.15e-10!35;UBERON:0000119!4.42e-10!312;UBERON:0004921!7.69e-10!129;UBERON:0004185!7.69e-10!129;UBERON:0000077!8.73e-10!130;UBERON:0000922!3.82e-09!612;UBERON:0002050!8.31e-09!605;UBERON:0005423!8.31e-09!605;UBERON:0003914!8.39e-09!118;UBERON:0000923!1.53e-08!604;UBERON:0005291!1.53e-08!604;UBERON:0006598!1.53e-08!604;UBERON:0002532!1.53e-08!604;UBERON:0000466!1.65e-08!126;UBERON:0004923!1.97e-08!57;UBERON:0000464!2.21e-08!104;UBERON:0005256!2.75e-08!143;UBERON:0000062!3.48e-08!511;UBERON:0005911!5.56e-08!82;UBERON:0000165!6.29e-08!28;UBERON:0000930!6.29e-08!28;UBERON:0000490!9.24e-08!138;UBERON:0004872!1.17e-07!84;UBERON:0000064!1.68e-07!219;UBERON:0005156!1.92e-07!59;UBERON:0000990!1.92e-07!59;UBERON:0000166!2.81e-07!21;UBERON:0001004!3.10e-07!72;UBERON:0000915!3.97e-07!52;UBERON:0000055!9.25e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001555;6.27e-08;54!UBERON:0000165;6.50e-08;28!UBERON:0004921;5.93e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.17e-18,160;UBERON:0000925,1.17e-18,160;UBERON:0006595,1.17e-18,160;UBERON:0001007,2.99e-15,145;UBERON:0001555,2.99e-15,145;UBERON:0007026,2.99e-15,145;UBERON:0003102,4.12e-12,99;UBERON:0004923,2.89e-10,66;UBERON:0000161,3.24e-10,36;UBERON:0004921,2.87e-09,118;UBERON:0002100,2.50e-08,199;UBERON:0000165,7.51e-08,29;UBERON:0000930,7.51e-08,29;UBERON:0005911,1.49e-07,82;UBERON:0000915,1.63e-07,52;UBERON:0004111,1.95e-07,240;UBERON:0000166,2.92e-07,22;UBERON:0001004,2.98e-07,74 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.422863212287913,1.0007329835313,0.893922188854576,2.61701557230111,0,0.631719873426831,0.261185628199839,1.72013755551056,3.48900583986214,5.89791704751465,2.63766978228454,1.23766352960047,0.994192127183747,0.672325146451775,1.20538905604795,2.92124036154949,1.46379839637152,0.123121058076788,0.612002073732759,0,0,0.547497700291537,0,0,0,0,0,0,0.464448369948228,3.67768489791571,3.0120591877825,1.47901604066715,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.02290049474824,1.80719576192283,2.00535164254356,0.579386075843295,1.5905718941022,0.486634870302636,0.378139268656271,0.221729397462564,0.43917392846563,2.42311289670768,1.09288586487763,3.33705998505986,0,0,0,0,0,0,3.9752481473341,4.30117297553062,4.51282652089873,6.21838736116411,2.51699661725944,2.20094433552054,2.50793959844173,3.6178346283706,6.40379272836078,3.68192674041137,0,0.760272105718513,2.92874469057803,2.94130464276695,1.62028389576352,5.44728342532887,6.06229306090659,5.51796254368279,3.06633274931766,0.949265659568129,4.21364011039937,0,0,2.61656431285521,3.47880366186723,2.40597972162702,5.82600395578163,3.15520282823695,1.41867352879343,1.12135520028461,1.06748995729705,1.48000529050296,1.24484414159907,2.02066008104532,0.980771418680752,0.605429710579726,0,0,1.24864030732128,2.2818872861778,1.19558944441441,1.52664848236894,1.13311061057692,1.54495887372473,2.44985005505872,0.982674538494144,1.65321249881225,4.75201142912821,1.23633464639278,0.910161361938026,0,0.505008341862199,1.00094815897571,3.04770527032601,2.19488810440419,4.29082914118628,2.10333282469236,0.226864366320042,2.87023417102179,1.06778694409284,2.96704661623387,2.10063767259082,2.16410311400722,2.31876486041066,3.35010341396862,3.88185564154912,2.24105111870757,3.78650661366172,3.31379635112278,3.23292113637624,2.4850671476163,2.51880245569101,2.20428770003634,4.63826047591912,4.63668405004419,7.1701148847251,0.121973706129595,0,0.580969714347592,0.725627385107593,1.00928340350251,0,1.56449532329816,1.28648187638577,0,0.928735856063958,0.721879481669586,0.709840800239063,0.674338760312407,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0.38474715694639,1.4763109092493,0,0.8231480226628,0,7.60530208930985,7.86261773342101,14.7697476670351,0,5.53447973444011,0.171567810298526,1.53650399572076,1.1240175325762,2.21163739305588,4.81459914824354,0,0,1.44331342025273,0,0.587043471179108,2.16549671641611,1.38895653772983,0.951270761172991,4.74122638775565,5.15091697256924,0,0,0.148631162288728,4.68669169933885,6.04735661515894,6.52165447314978,0.895585227028483,3.48760726216754,4.98397482914775,0,0,0,0,0,0,0,0,1.71072446022705,0.616964956219941,0,0,1.00917975910825,0,0.66004457238855,3.23179289394444,0,0,2.39344304926383,2.08014873822732,0.771622122786426,0,0.266422179016099,0.57191197463259,0,0,0.65147236858747,0.355391948742546,0,1.50719688529793,0,0.499864955910285,0,0,0,2.39624855491583,2.29723871668228,7.13184525203592,2.46128221334885,2.67119219315498,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,1.47229790062968,0.500170521059677,1.62759014219841,8.94274704582471,4.46072471992904,7.88512075169673,4.91993942969395,1.20378439891088,0,2.0694614258501,1.32845119707087,0.553107505625109,2.86715927744673,0,0.343143423810856,0,0,0,1.5156378572313,8.32177197552485,3.0239029332968,3.2254015016441,1.53461973288062,1.96462066103151,1.79394808957981,2.04682899626681,2.0911009748669,1.48418066444991,1.07946785661859,1.06537035187876,1.39616165223476,0,0.697262270759755,4.59265908448164,6.41620704970512,3.22283461275637,1.14814448164607,1.63882051206045,1.31124414959424,1.80479845162965,3.54270550680308,0,1.46139224653261,1.47772280450026,2.27466768141793,0.850468526382578,2.80690690932781,0,0.270946437543853,1.00337954770971,4.07802036872061,3.3243040357149,0.895499018888713,0,0,0.769350375349168,0.328014645699706,1.30151357865721,7.62503486193145,0,0.082509499920588,4.59412430396938,1.95018073810956,4.82051789532479,0.386682873168488,0.770243085573222,0.767518373630648,0.964856007391714,0.214840489736547,1.0151168573996,0.596586391912706,0.445160178233687,5.95025695299521,2.88285101047659,6.89108647470754,6.4740979747552,1.39453664789186,3.77774816196768,1.3940745403212,0.924100740528266,1.06461206063404,0,1.8532421910392,2.43312307461385,0.744316738719335,1.2655176988749,1.14378116354295,0.255897791311334,2.1396949401696,1.27281299170375,0,0.899362287916574,0.54907405947211,0.706874414074119,1.01091240786658,3.17020642346017,1.26377536871694,0,1.70599442741899,3.16950440270266,2.04749867111979,0.141405431953713,2.26016233240486,0.551365343546124,3.3171948762061,3.5076070820301,0.578775534266688,1.31178950409327,1.01455188481352,0.30982349809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| |||
|short_description=p2@ATP8B1 | |||
}} |
Revision as of 19:30, 20 January 2014
Short description: | p2@ATP8B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ATP8B1_5end |
Coexpression cluster: | C3730_colon_stomach_pancreas_salivary_parotid_rectum_small |
Association with transcript: | -14bp_to_ENST00000536015, NM_005603_5end |
EntrezGene: | ATP8B1 |
HGNC: | 3706 |
UniProt: | O43520 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.52e-11 | 253 |
endo-epithelial cell | 1.95e-08 | 42 |
endodermal cell | 7.52e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.17e-18 | 160 |
endoderm | 1.17e-18 | 160 |
presumptive endoderm | 1.17e-18 | 160 |
digestive system | 2.99e-15 | 145 |
digestive tract | 2.99e-15 | 145 |
primitive gut | 2.99e-15 | 145 |
surface structure | 4.12e-12 | 99 |
organ component layer | 2.89e-10 | 66 |
orifice | 3.24e-10 | 36 |
subdivision of digestive tract | 2.87e-09 | 118 |
trunk | 2.50e-08 | 199 |
mouth | 7.51e-08 | 29 |
stomodeum | 7.51e-08 | 29 |
endo-epithelium | 1.49e-07 | 82 |
thoracic segment of trunk | 1.63e-07 | 52 |
anatomical conduit | 1.95e-07 | 240 |
oral opening | 2.92e-07 | 22 |
respiratory system | 2.98e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.23e-07 | 14 |