FFCP PHASE1:Hg19::chr19:46894342..46894354,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C193 | |||
|description=CAGE_peak_at_chr19:46894342..46894354,+ | |||
|id=chr19:46894342..46894354,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.14e-38!75;CL:0000055!3.17e-26!180;CL:0002620!3.65e-26!23;CL:0002334!8.99e-24!12;CL:0002570!1.40e-16!8;CL:0000048!1.14e-15!430;CL:0000723!3.76e-15!436;CL:0000034!1.75e-14!444;CL:0002320!3.99e-13!365;CL:0000134!3.74e-11!358;CL:0000136!1.44e-10!15;CL:0000219!1.10e-08!390;CL:1000306!4.23e-08!4;CL:0002547!4.23e-08!4;CL:0002551!4.96e-08!6;CL:0000135!1.55e-07!3;CL:0000386!1.55e-07!3;CL:0000388!1.55e-07!3;CL:0000569!1.70e-07!4;CL:0000011!1.70e-07!4;CL:0002371!2.11e-07!591;CL:0002580!2.22e-07!3;CL:0002579!5.98e-07!3;CL:0002582!7.77e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.24e-35;12!CL:0002570;1.79e-20;8!CL:0000135;1.53e-14;3!CL:0000388;1.53e-14;3!CL:0002580;4.25e-14;3!CL:0000057;2.95e-10;73!CL:0002583;5.54e-10;2!CL:0000136;9.76e-09;13!CL:0002620;1.42e-08;23!CL:0000214;1.96e-07;3!CL:0002521;2.40e-07;3!CL:0002579;3.69e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.26e-35,12;CL:0000057,7.79e-26,76;CL:0002570,1.33e-20,8;CL:0000135,2.17e-14,3;CL:0000388,2.17e-14,3;CL:0000136,2.25e-14,15;CL:0002580,4.67e-14,3;CL:0002320,7.68e-13,361;CL:0000134,2.00e-11,354;CL:0000048,2.89e-11,427;CL:0000723,5.46e-11,433;CL:0000034,1.24e-10,441;CL:0002583,4.04e-10,2;CL:0000219,1.05e-09,386;CL:0002620,1.01e-08,23;CL:0000214,2.00e-07,3;CL:0002521,2.33e-07,3;CL:0002579,3.93e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.98e-10!5;DOID:450!1.98e-10!5;DOID:66!1.98e-10!5;DOID:423!1.98e-10!5;DOID:0080000!1.98e-10!5;DOID:11722!1.98e-10!5 | |||
|ontology_enrichment_disease_v019=DOID:17;2.38e-08;5!DOID:450;2.38e-08;5!DOID:66;2.38e-08;5!DOID:423;2.38e-08;5!DOID:0080000;2.38e-08;5!DOID:11722;2.38e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.57e-08,5;DOID:450,1.57e-08,5;DOID:66,1.57e-08,5;DOID:423,1.57e-08,5;DOID:0080000,1.57e-08,5;DOID:11722,1.57e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001013!4.59e-24!14;UBERON:0002199!1.60e-17!45;UBERON:0002416!1.60e-17!45;UBERON:0002384!1.57e-13!375;UBERON:0002097!8.94e-13!40;UBERON:0003102!7.03e-09!95;UBERON:0003688!9.01e-09!6;UBERON:0002358!9.01e-09!6;UBERON:0003684!9.01e-09!6;UBERON:0001178!9.01e-09!6;UBERON:0000415!4.23e-08!4;UBERON:0007240!4.23e-08!4;UBERON:0005742!4.23e-08!4;UBERON:0005734!4.23e-08!4;UBERON:0004664!4.23e-08!4;UBERON:0004663!4.23e-08!4;UBERON:0004457!4.55e-08!12;UBERON:0000042!4.55e-08!12;UBERON:0002072!1.02e-07!5;UBERON:0000043!1.55e-07!3;UBERON:0004905!2.09e-07!5;UBERON:0000982!2.09e-07!5;UBERON:0004770!2.09e-07!5;UBERON:0000947!2.14e-07!21;UBERON:0010191!2.14e-07!21;UBERON:0000914!2.71e-07!83;UBERON:0002329!2.71e-07!83;UBERON:0003077!2.71e-07!83;UBERON:0003059!2.71e-07!83;UBERON:0007282!2.71e-07!83;UBERON:0009618!2.71e-07!83;UBERON:0007285!2.71e-07!83;UBERON:0004573!2.97e-07!33;UBERON:0004571!2.97e-07!33;UBERON:0001135!6.79e-07!15;UBERON:0004290!6.92e-07!70;UBERON:0000486!8.88e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.41e-31;14!UBERON:0002072;4.04e-15;5!UBERON:0007846;1.53e-14;3!UBERON:0000043;1.53e-14;3!UBERON:0007845;1.53e-14;3!UBERON:0004457;5.10e-13;9!UBERON:0000042;5.10e-13;9!UBERON:0005406;2.43e-10;2!UBERON:0004905;2.28e-09;8!UBERON:0000982;2.28e-09;8!UBERON:0004770;2.28e-09;8!UBERON:0003688;1.53e-07;6!UBERON:0002358;1.53e-07;6!UBERON:0003684;1.53e-07;6!UBERON:0001178;1.53e-07;6!UBERON:0006915;1.96e-07;3!UBERON:0007616;1.96e-07;3!UBERON:0002217;1.96e-07;3!UBERON:0002018;1.96e-07;3!UBERON:0002190;2.40e-07;3!UBERON:0000310;2.82e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,7.70e-32,14;UBERON:0002072,3.03e-15,5;UBERON:0007846,2.17e-14,3;UBERON:0000043,2.17e-14,3;UBERON:0007845,2.17e-14,3;UBERON:0002384,2.87e-12,371;UBERON:0005406,1.60e-10,2;UBERON:0002199,8.32e-10,46;UBERON:0002416,8.32e-10,46;UBERON:0004457,1.29e-09,12;UBERON:0000042,1.29e-09,12;UBERON:0004905,3.00e-09,8;UBERON:0000982,3.00e-09,8;UBERON:0004770,3.00e-09,8;UBERON:0003688,1.83e-07,6;UBERON:0002358,1.83e-07,6;UBERON:0003684,1.83e-07,6;UBERON:0001178,1.83e-07,6;UBERON:0006915,2.00e-07,3;UBERON:0007616,2.00e-07,3;UBERON:0002217,2.00e-07,3;UBERON:0002018,2.00e-07,3;UBERON:0002190,2.33e-07,3;UBERON:0000310,3.07e-07,10 | |||
|phase1_expression=0.726713517082227,1.2846031433459,0.986680828671798,2.00146596706261,0,2.61701557230111,12.6649939084155,0,2.35067065379855,0,0,0,0,0.618831764800233,1.32558950291166,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.886413581652058,0.529636723252875,0.286836620748814,0.709336764396714,0,0,0,0,0,0,0,0,0,0.312160076830321,2.2818872861778,1.94283284717341,0.23486899728753,0,0.140450806702248,2.04154171254893,0.122834317311768,2.16984140469107,0,0,0.910161361938026,0,0,0,1.10825646193673,0,0,0,0,0.358779271377724,1.70845911054854,1.69545520927649,0.600182192168805,1.33968288009971,0.515281080091258,4.65292140828975,0.168776332241266,0.779496041289589,0.252433774244115,1.56484827691909,0.161646056818812,0,0,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,71.5312891703765,6.762422020448,0,0,0,0,0,0,0,0,1.30294473717494,0,0,0,0,0,0,0,0,0,0,0,1.44781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,1.00034104211935,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,3.96972492510043,1.53461973288062,1.12264037773229,2.05022638809122,2.55853624533352,0.160853921143607,2.96836132889982,1.69630663182921,2.30830242907065,1.14978018419333,0.519254429183621,1.16210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0.580066775656914,0,0,0,0,0,0,1.39453664789186,0,0.6970372701606,0.308033580176089,0,0,0,0,0.372158369359667,0,0,0.255897791311334,0,0.636406495851874,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,1.99031692572366,0,0.578775534266688,0.655894752046633,0,0,0,0,0,0,0,3.16661452946496,8.23237232399755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0.447764408660622,0.233713309847224,1.66441758450784,0.378806010550178,0.251567901752575,2.66943366478961,0.457680136793847,0.302461847526478,0.310874401165561,0.147855149989634,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,2.74716564146234,3.36749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,1.11598505450025,2.31087814315709,8.21990468035199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:46894342..46894354,+ | |||
}} |
Revision as of 00:03, 21 January 2014
Short description: | p@chr19:46894342..46894354, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:46894342..46894354, + |
Coexpression cluster: | C193_Mesenchymal_Adipocyte_mature_Cardiac_heart_CD14CD16_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.26e-35 | 12 |
fibroblast | 7.79e-26 | 76 |
mesenchymal stem cell of adipose | 1.33e-20 | 8 |
fibrocyte | 2.17e-14 | 3 |
tendon cell | 2.17e-14 | 3 |
fat cell | 2.25e-14 | 15 |
preadipocyte of the breast | 4.67e-14 | 3 |
connective tissue cell | 7.68e-13 | 361 |
mesenchymal cell | 2.00e-11 | 354 |
multi fate stem cell | 2.89e-11 | 427 |
somatic stem cell | 5.46e-11 | 433 |
stem cell | 1.24e-10 | 441 |
subcutaneous preadipocyte | 4.04e-10 | 2 |
motile cell | 1.05e-09 | 386 |
skin fibroblast | 1.01e-08 | 23 |
synovial cell | 2.00e-07 | 3 |
subcutaneous fat cell | 2.33e-07 | 3 |
omentum preadipocyte | 3.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 7.70e-32 | 14 |
hypodermis | 3.03e-15 | 5 |
dense regular connective tissue | 2.17e-14 | 3 |
tendon | 2.17e-14 | 3 |
regular connective tissue | 2.17e-14 | 3 |
connective tissue | 2.87e-12 | 371 |
perirenal fat | 1.60e-10 | 2 |
integument | 8.32e-10 | 46 |
integumental system | 8.32e-10 | 46 |
cavity lining | 1.29e-09 | 12 |
serous membrane | 1.29e-09 | 12 |
articulation | 3.00e-09 | 8 |
skeletal joint | 3.00e-09 | 8 |
articular system | 3.00e-09 | 8 |
omentum | 1.83e-07 | 6 |
peritoneum | 1.83e-07 | 6 |
abdominal cavity | 1.83e-07 | 6 |
visceral peritoneum | 1.83e-07 | 6 |
stratified squamous epithelium | 2.00e-07 | 3 |
layer of synovial tissue | 2.00e-07 | 3 |
synovial joint | 2.00e-07 | 3 |
synovial membrane of synovial joint | 2.00e-07 | 3 |
subcutaneous adipose tissue | 2.33e-07 | 3 |
breast | 3.07e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.57e-08 | 5 |
myotonic disease | 1.57e-08 | 5 |
muscle tissue disease | 1.57e-08 | 5 |
myopathy | 1.57e-08 | 5 |
muscular disease | 1.57e-08 | 5 |
myotonic dystrophy | 1.57e-08 | 5 |