FFCP PHASE1:Hg19::chr1:153599994..153600045,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6284 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10490 | |||
|TSSclassifier=strong | |||
|UniProt=Q99584 | |||
|association_with_transcript=71bp_to_NM_001024211,uc001fch.2_5end | |||
|coexpression_cluster_id=C345 | |||
|description=CAGE_peak_2_at_S100A13_5end | |||
|id=chr1:153599994..153600045,- | |||
|ontology_enrichment_celltype=CL:0000055!9.62e-28!180;CL:0000222!1.24e-22!119;CL:0000220!3.14e-20!246;CL:0002321!5.97e-20!248;CL:0000183!4.88e-18!59;CL:0000680!6.31e-17!57;CL:0000056!6.31e-17!57;CL:0000355!6.31e-17!57;CL:0000187!5.41e-16!54;CL:0000393!3.84e-14!60;CL:0000211!3.84e-14!60;CL:0000192!6.53e-13!42;CL:0000514!6.53e-13!42;CL:0000359!2.75e-10!32;CL:0000115!1.47e-09!35;CL:0002078!2.31e-09!44;CL:0000066!3.48e-09!254;CL:0002139!1.05e-08!24;CL:0000548!1.20e-08!679;CL:0000004!1.20e-08!679;CL:0000255!1.20e-08!679;CL:0000012!4.11e-08!682;CL:0000213!1.02e-07!57;CL:0000215!1.02e-07!57;CL:0002371!1.28e-07!591;CL:0000071!4.75e-07!18;CL:0002546!4.75e-07!18;CL:0000057!5.91e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.05e-09;32!CL:0000192;1.50e-09;43!CL:0000187;2.65e-09;55!CL:0002139;1.06e-08;24!CL:0000115;3.93e-08;36!CL:0000393;9.48e-08;61!CL:0000211;9.48e-08;61!CL:0000071;4.86e-07;18!CL:0002078;6.28e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.99e-23,121;CL:0002321,2.89e-20,250;CL:0000680,2.97e-17,58;CL:0000056,2.97e-17,58;CL:0000355,2.97e-17,58;CL:0000187,2.59e-16,55;CL:0000393,1.87e-14,61;CL:0000211,1.87e-14,61;CL:0000192,3.27e-13,43;CL:0000514,3.27e-13,43;CL:0000359,2.51e-10,32;CL:0000115,8.42e-10,36;CL:0002078,1.31e-09,45;CL:0000066,8.60e-09,253;CL:0002139,9.77e-09,24;CL:0000213,6.06e-08,58;CL:0000215,6.06e-08,58;CL:0000057,3.96e-07,76;CL:0000071,4.47e-07,18;CL:0002546,4.47e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000355;1.50e-09;58!CL:0000514;1.50e-09;43!CL:0002546;4.86e-07;18!CL:0000222;8.09e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!2.49e-21!82;UBERON:0000914!3.24e-20!83;UBERON:0002329!3.24e-20!83;UBERON:0003077!3.24e-20!83;UBERON:0003059!3.24e-20!83;UBERON:0007282!3.24e-20!83;UBERON:0009618!3.24e-20!83;UBERON:0007285!3.24e-20!83;UBERON:0002049!1.52e-19!79;UBERON:0007798!1.52e-19!79;UBERON:0002100!6.34e-19!216;UBERON:0000490!1.90e-18!138;UBERON:0005256!2.60e-18!143;UBERON:0004290!4.38e-18!70;UBERON:0000055!1.95e-17!69;UBERON:0001134!2.17e-17!61;UBERON:0002036!2.17e-17!61;UBERON:0003082!2.17e-17!61;UBERON:0000119!5.52e-17!312;UBERON:0000483!1.02e-16!309;UBERON:0002385!1.06e-16!63;UBERON:0001015!1.06e-16!63;UBERON:0000383!1.06e-16!63;UBERON:0004872!3.75e-16!84;UBERON:0003914!1.04e-15!118;UBERON:0003104!2.79e-15!238;UBERON:0009142!2.79e-15!238;UBERON:0000475!4.14e-15!365;UBERON:0000481!6.14e-15!347;UBERON:0001981!1.29e-14!60;UBERON:0007500!1.29e-14!60;UBERON:0004537!1.29e-14!60;UBERON:0006965!1.29e-14!60;UBERON:0001009!1.54e-12!113;UBERON:0000468!3.12e-12!659;UBERON:0004535!8.46e-12!110;UBERON:0000477!1.08e-11!286;UBERON:0001637!9.84e-11!42;UBERON:0003509!9.84e-11!42;UBERON:0004572!9.84e-11!42;UBERON:0000480!8.49e-10!626;UBERON:0000467!1.47e-09!625;UBERON:0006914!8.09e-09!25;UBERON:0004111!1.22e-08!241;UBERON:0004573!5.39e-08!33;UBERON:0004571!5.39e-08!33;UBERON:0000926!6.96e-08!448;UBERON:0004120!6.96e-08!448;UBERON:0006603!6.96e-08!448;UBERON:0000487!1.88e-07!22;UBERON:0002050!3.15e-07!605;UBERON:0005423!3.15e-07!605;UBERON:0000923!3.41e-07!604;UBERON:0005291!3.41e-07!604;UBERON:0006598!3.41e-07!604;UBERON:0002532!3.41e-07!604;UBERON:0000922!3.93e-07!612;UBERON:0001986!4.75e-07!18;UBERON:0004638!4.75e-07!18;UBERON:0004852!4.75e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0006914;8.12e-09;25!UBERON:0007500;1.06e-08;56!UBERON:0001981;1.06e-08;56!UBERON:0004537;1.06e-08;56!UBERON:0002049;1.18e-08;75!UBERON:0007798;1.18e-08;75!UBERON:0000055;1.76e-08;65!UBERON:0001637;1.05e-07;42!UBERON:0003509;1.05e-07;42!UBERON:0004572;1.05e-07;42!UBERON:0000490;1.18e-07;33!UBERON:0000487;1.91e-07;22!UBERON:0003914;3.30e-07;74!UBERON:0004573;3.32e-07;33!UBERON:0004571;3.32e-07;33!UBERON:0004638;4.86e-07;18!UBERON:0001986;4.86e-07;18!UBERON:0004852;4.86e-07;18!UBERON:0002204;7.27e-07;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,1.09e-21,83;UBERON:0007503,5.35e-21,78;UBERON:0000490,8.65e-20,148;UBERON:0002049,1.67e-19,78;UBERON:0007798,1.67e-19,78;UBERON:0002329,2.01e-18,71;UBERON:0003059,2.01e-18,71;UBERON:0007282,2.01e-18,71;UBERON:0004290,2.01e-18,71;UBERON:0009618,2.01e-18,71;UBERON:0007524,2.30e-18,73;UBERON:0003077,4.23e-18,72;UBERON:0007285,4.23e-18,72;UBERON:0001134,1.01e-17,62;UBERON:0002036,1.01e-17,62;UBERON:0003082,1.01e-17,62;UBERON:0000055,2.17e-17,68;UBERON:0003104,2.30e-17,160;UBERON:0009142,2.30e-17,160;UBERON:0000119,2.38e-17,309;UBERON:0000483,4.43e-17,306;UBERON:0002385,4.98e-17,64;UBERON:0001015,4.98e-17,64;UBERON:0000383,4.98e-17,64;UBERON:0002100,1.92e-16,199;UBERON:0005256,2.12e-16,122;UBERON:0004872,4.00e-16,83;UBERON:0003914,1.98e-15,117;UBERON:0007500,1.48e-14,59;UBERON:0001981,1.48e-14,59;UBERON:0004537,1.48e-14,59;UBERON:0006965,1.48e-14,59;UBERON:0001009,1.01e-12,112;UBERON:0004535,5.67e-12,109;UBERON:0001637,8.92e-11,42;UBERON:0003509,8.92e-11,42;UBERON:0004572,8.92e-11,42;UBERON:0006914,7.48e-09,25;UBERON:0004111,1.33e-08,240;UBERON:0004573,5.03e-08,33;UBERON:0004571,5.03e-08,33;UBERON:0000487,1.76e-07,22;UBERON:0004638,4.47e-07,18;UBERON:0001986,4.47e-07,18;UBERON:0004852,4.47e-07,18 | |||
|phase1_expression=79.3934517412332,29.1176712491737,37.9167347018162,45.0329842589087,23.6889380046463,53.2126499701225,78.5229622321763,24.6370750636464,20.3724789995874,32.1911456816977,61.4065027815736,28.8342611211827,34.289707169699,78.5916341296296,43.0816588446291,20.842079540005,23.5050865929351,16.7971320789096,17.5655807564582,40.0143438749561,48.348163824888,34.4800193625897,27.7648907517125,20.8049126110784,21.7188766499009,0.152826811495903,0.328402357799783,0.236132343941038,0.393364276848904,0.383829398097213,0.464448369948228,57.0041159176935,43.373652304068,27.7315507625091,0,0,1.46800219667424,0,0,0,2.91090116511902,1.94336199611388,1.28787783817093,0.145398238779565,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0.639337125799041,0,0.398927315243264,0,0.290209238628584,0,0,0,0,0.217188844705117,0.605399502633369,0,0.316462387440884,0.211255286311942,0,0,0.112328631146495,0,0,0,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0,0,0,3.96513985737078,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,21.9426179682566,44.9369576001436,28.0019010437331,31.4452062574573,47.1257635997736,32.4456202472245,62.8275898170368,51.0966613817768,39.04287948876,30.1551980549087,25.4720878510066,12.312033096785,40.4367770004722,24.8425576665568,2.27183175558278,2.08955684759121,2.92507513141503,0.476981248610684,0,0.371457501329565,34.1871340670733,74.8404097742328,37.8383146752278,59.357333902021,28.5259616622736,15.1314923067037,33.8571845789633,38.2456803570607,28.8170672776235,26.4429284084089,45.1168835162245,110.239455329184,52.9614664879528,27.942394106286,52.6592266123144,27.950814952917,28.7397596961497,16.3286646700817,50.5944903637415,60.7530022123603,46.8996464461843,0,0,37.0679944321154,29.8183171017191,27.9853430778721,8.87141511448566,4.58938593198102,14.1867352879343,25.2304920064038,26.6872489324262,39.7134752951628,18.3614510885862,22.4966822356379,29.7500663666495,25.4280478443485,21.31850920576,20.3859645695403,36.2105689123172,48.4901048312782,45.8807449294029,20.5510372626589,20.0722451016483,19.803563745017,26.3358880918812,22.23301143343,19.7352242045712,34.4520828611796,34.8646370282765,29.1251635820168,76.8921411743375,35.0139117024458,15.6398149839955,9.6972440419464,31.6063887034203,63.7494615261961,35.0054677252371,36.2982986112067,7.17558542755448,36.7318708767936,34.1210360866895,12.3037349394605,27.7211303651401,9.53269998168828,37.4094881226496,6.75105328965065,24.1643772799773,6.31084435610286,42.6191030713846,22.6304479546337,9.9402685904652,24.3820077710889,21.3646346311214,30.7284756529642,29.729327144401,22.9443676311203,9.27000166584925,12.3252684538981,16.2671520017326,10.4697665565524,14.8869302016621,17.8838905947157,17.2094485562798,14.7945415784364,22.1015874163969,57.5816230759654,64.2472738685931,27.4471776092438,23.0961025406999,22.4140257791638,27.6837871558309,22.6594621856102,26.3370387213317,30.337044336037,28.2558909780498,25.7780595154082,33.9551509127338,57.4991272594128,52.2698994390878,82.3248783759035,5.07020139287323,8.84544495009863,10.0434284135839,0,8.36321382093172,19.7302981843304,16.7917936675197,29.2244558469811,13.4708823031585,25.9247646443883,23.1323896770331,28.0782392025486,25.9796415645492,34.8950518974981,21.0161562682121,39.5564066865342,49.0764643331207,31.3919351187087,18.1747011530633,18.8866955660872,1.23108503043699,2.34004265139238,1.0404181360211,52.4909470325951,17.1341770762837,20.4156140029037,11.7321664740731,13.3691611716422,22.6195780707475,3.4486426652716,8.01240749520357,11.6103744702832,3.17063897517315,4.79721247020244,23.2402293109339,27.1211782146377,57.436549132923,42.7681115056763,12.7506090952121,24.9284738010452,14.0054951988983,20.519988435201,16.1305225468314,28.3819166127077,28.0519623194378,432.764299480778,38.03862386502,24.2003686092232,16.6411899058186,63.273014068487,29.7883177248884,57.5471906674775,33.5998285096647,48.8359444852299,38.6922958286961,34.5280355351359,34.4730190280269,38.0136899008046,30.7468164600778,54.9066078918185,15.795732606765,1.2162378064119,0,0,24.2021104046498,20.6751484501405,24.2482738569221,43.4343920002738,37.3966907041698,28.2916321919035,0.112085143993527,0.197030760201927,0,0.385029108839245,7.36874410245144,9.10978977003352,5.41302168944387,5.36052049069916,7.65526501983796,0,0,0,44.6597029857669,71.5243845115338,33.0943328913677,22.2528821837964,20.3409047228764,23.3399574250223,29.8710608231419,74.6346327324743,140.992652514711,78.6395341823037,27.2332495399529,42.22053959605,26.3257351838291,97.7047775739075,71.0306887288472,0,0,0.106727557803444,30.9190122875185,64.9098214090939,31.4485905062867,50.1177771793929,15.8065832486704,29.4693099154727,37.288492433409,44.0068234197365,14.4768529029247,54.9146845846467,22.9772443765957,25.3913267197772,23.5704937759632,27.0012303175483,25.7987040181109,7.493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| |||
|short_description=p2@S100A13 | |||
}} |
Revision as of 21:02, 10 January 2014
Short description: | p2@S100A13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_S100A13_5end |
Coexpression cluster: | C345_Mesenchymal_Fibroblast_Alveolar_Renal_Pericytes_Hepatic_Smooth |
Association with transcript: | 71bp_to_NM_001024211, uc001fch.2_5end |
EntrezGene: | S100A13 |
HGNC: | 10490 |
UniProt: | Q99584 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.99e-23 | 121 |
embryonic cell | 2.89e-20 | 250 |
muscle precursor cell | 2.97e-17 | 58 |
myoblast | 2.97e-17 | 58 |
multi-potent skeletal muscle stem cell | 2.97e-17 | 58 |
muscle cell | 2.59e-16 | 55 |
electrically responsive cell | 1.87e-14 | 61 |
electrically active cell | 1.87e-14 | 61 |
smooth muscle cell | 3.27e-13 | 43 |
smooth muscle myoblast | 3.27e-13 | 43 |
vascular associated smooth muscle cell | 2.51e-10 | 32 |
endothelial cell | 8.42e-10 | 36 |
meso-epithelial cell | 1.31e-09 | 45 |
epithelial cell | 8.60e-09 | 253 |
endothelial cell of vascular tree | 9.77e-09 | 24 |
lining cell | 6.06e-08 | 58 |
barrier cell | 6.06e-08 | 58 |
fibroblast | 3.96e-07 | 76 |
blood vessel endothelial cell | 4.47e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.47e-07 | 18 |