FFCP PHASE1:Hg19::chr1:155225028..155225037,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10712 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1233 | |||
|TSSclassifier=strong | |||
|UniProt=Q96AD8 | |||
|association_with_transcript=-46bp_to_ENST00000487649_5end | |||
|description=CAGE_peak_7_at_FAM189B_5end | |||
|id=chr1:155225028..155225037,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002504;6.88e-17;3!CL:1000279;6.88e-17;3!CL:1000280;6.88e-17;3!CL:0000669;1.54e-12;4!CL:0002195;1.85e-12;2!CL:0002571;1.85e-12;2!CL:0002575;1.32e-11;2!CL:0002586;2.20e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,8.36e-17,3;CL:1000279,8.36e-17,3;CL:1000280,8.36e-17,3;CL:0000669,6.73e-13,4;CL:0002195,1.71e-12,2;CL:0002571,1.71e-12,2;CL:0002575,4.95e-12,2;CL:0002586,1.76e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.64e-15!365;UBERON:0000481!1.59e-12!347;UBERON:0000477!1.63e-12!286;UBERON:0000483!1.60e-11!309;UBERON:0000119!2.57e-11!312;UBERON:0002100!6.70e-11!216;UBERON:0000064!1.07e-09!219;UBERON:0000480!4.82e-09!626;UBERON:0000468!5.00e-09!659;UBERON:0000467!9.80e-09!625;UBERON:0005256!1.06e-08!143;UBERON:0000922!1.47e-08!612;UBERON:0000923!2.36e-08!604;UBERON:0005291!2.36e-08!604;UBERON:0006598!2.36e-08!604;UBERON:0002532!2.36e-08!604;UBERON:0002050!3.12e-08!605;UBERON:0005423!3.12e-08!605;UBERON:0003104!1.39e-07!238;UBERON:0009142!1.39e-07!238;UBERON:0004111!2.91e-07!241;UBERON:0000063!8.32e-07!97;UBERON:0000062!8.96e-07!511;UBERON:0006554!9.01e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.93e-10;19!UBERON:0006925;6.93e-10;19!UBERON:0001781;2.20e-08;3!UBERON:0001782;2.20e-08;3!UBERON:0002423;2.26e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.85e-10,19;UBERON:0006925,7.85e-10,19;UBERON:0008836,7.85e-10,19;UBERON:0001782,1.76e-08,3;UBERON:0005424,1.76e-08,3;UBERON:0008835,2.07e-08,22;UBERON:0003894,2.07e-08,22;UBERON:0009854,5.08e-08,23;UBERON:0007499,2.48e-07,25;UBERON:0009497,2.48e-07,25;UBERON:0000015,2.48e-07,25;UBERON:0002423,2.48e-07,25;UBERON:0006235,2.48e-07,25;UBERON:0004161,2.48e-07,25;UBERON:0002417,2.64e-07,60;UBERON:0000916,2.64e-07,60;UBERON:0009856,5.00e-07,26 | |||
|phase1_expression=0.181678379270557,12.631930909568,0.704772020479856,0,1.78784437770915,0,2.53299878168311,0,0.783556884599516,0,3.48900583986214,0.218441372130172,0.527533956456907,0.247532705920093,0.331397375727916,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0.547497700291537,0.87879847716362,0,0,0.0787107813136792,0,0,0,0,0.6024118375565,0.369754010166788,0.0774672005803016,0,0,0,0,0,0.223915474239924,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0.567208902984407,0.443458794925128,1.14185221401064,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.516833518338658,0,0,0,0.760272105718513,0,0.367663080345869,0,0.17859945656816,0.44905874525234,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0.436094052142534,0.496971951695318,0.25326102332916,0,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0.151357427644931,0,0.468642863667593,0.624320153660641,0,1.64393548606981,0.704606991862589,0.323745888736263,0.561803226808994,0.61246251376468,0.982674538494144,0.929932030581889,1.18800285728205,0,0,2.15585442544872,0.673344455816265,1.00094815897571,0.554128230968366,0.438977620880838,0,0.901428353439581,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0.194874010322397,0.252433774244115,0,0.161646056818812,0,0,0,0.193260853163297,0.272746120590835,0,0.243947412259191,0.132529768321485,0.232387885739037,0.207322110030741,0,0.36497735907583,0,0,0,0.464367928031979,0.721879481669586,0.473227200159376,0.168584690078102,0,0.661763836394364,0.435758888184812,0,0.539325232640658,0.196221465125346,0.769494313892781,0,0,0.8231480226628,2.94017422771084,0,0,0,0,0.245976877086227,0.686271241194102,0.658501712451753,0,0.100528972411631,0.185176890317059,0.325808305310325,0,0,0.695582429850461,0,0.577465791044295,0.462985512576611,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0.283550194484773,0.179117045405697,0,0.766765358330422,0,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.1466765716419,0.129271715757778,3.57656445851882,0,0.26593811658487,0,1.54324424557285,0,0.266422179016099,2.43062589218851,0,4.11620168390384,0,3.55391948742546,0,0,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0.300946099727719,2.27407504055985,1.03473071292505,0,0.184369168541703,0.521301686808497,1.95801157462741,1.71571711905428,0,0,0,0.303127571446259,0,0.907170879989041,0,0,0,0.512556597022804,0.511707249066704,0.321707842287215,0,0.308419387605311,0.355123450626254,0.328508624055237,0.519254429183621,0.116210378459959,0.241718899183244,0.40101294060657,0.460404944679482,0.229628896329213,0.182091168006717,0.393373244878272,1.35359883872224,0.693138033939733,0,0,0.73886140225013,0,0.680374821106063,0.215915916102139,0,0.541892875087706,1.50506932156456,0.254876273045038,0,0.895499018888713,0,0,4.35965212697862,1.64007322849853,0.325378394664303,0.103041011647722,0.640986253728404,0.990113999047056,0.574265537996172,0,0,0.193341436584244,0.308097234229289,0.15350367472613,0,0.644521469209642,0.870100163485371,0.340906509664404,0.0890320356467374,0.495854746082934,0.192190067365106,0.127612712494584,0.10115778085555,0.464845549297286,0,0,0,0,0.869932992075073,0.37064843820784,0,0,0.316379424718726,0.762520775695299,1.535386747868,0.42793898803392,0.636406495851874,0,1.2591072030832,1.37268514868027,2.12062324222236,0.606547444719948,0,0,0,0.487426979262569,0,0.272999822815972,0.848432591722276,0,0,0,0,0.578775534266688,0,0.405820753925408,0,0,0.860468113224309,0.196498082026242,0,0,0.211107635297664,0,0.75894634753143,0.349934720244983,0.192444225451024,0.670302275535787,0,0,0.86101074534246,0,1.33029046061003,0.918893600827838,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0.156679895773023,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0.270455678475983,0.66614393599564,0,0.18714054040822,0.146508179271894,0.606802608747567,0,0,0,0,0,0,0.422008249231538,0.111308705022906,0,0,0,0,0,0,0.246169610922139,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.371072392647405,0,0,0.174919999992391,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0.10893846351899,0.139423744278603,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0.676786981851542,0.588187602953219,0.167821586975843,0,0,0,0,0,0,0,0.176915129006678,0,0,0.123563938946503,0,0.202203398942031,0,0.468528891450678,0,0,0.971121518136371,0.394584402849391,0,0,0,0.450970258243478,0.207376382794494,0,0,0,0,0.569219092059585,0,0,0.293977192243133,0,0.34945333648406,0,0.290268993867255,0,0.0821154570532092,0.0969890164884194,0,0,0,0.19871461170299,0.18993238786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| |||
|short_description=p7@FAM189B | |||
}} |
Revision as of 21:16, 10 January 2014
Short description: | p7@FAM189B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_FAM189B_5end |
Coexpression cluster: | NA |
Association with transcript: | -46bp_to_ENST00000487649_5end |
EntrezGene: | FAM189B |
HGNC: | 1233 |
UniProt: | Q96AD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 8.36e-17 | 3 |
smooth muscle cell of large intestine | 8.36e-17 | 3 |
smooth muscle cell of colon | 8.36e-17 | 3 |
pericyte cell | 6.73e-13 | 4 |
hepatic stem cell | 1.71e-12 | 2 |
hepatic mesenchymal stem cell | 1.71e-12 | 2 |
central nervous system pericyte | 4.95e-12 | 2 |
retinal pigment epithelial cell | 1.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 7.85e-10 | 19 |
digestive gland | 7.85e-10 | 19 |
liver bud | 7.85e-10 | 19 |
pigmented layer of retina | 1.76e-08 | 3 |
presumptive retinal pigmented epithelium | 1.76e-08 | 3 |
hepatic diverticulum | 2.07e-08 | 22 |
liver primordium | 2.07e-08 | 22 |
digestive tract diverticulum | 5.08e-08 | 23 |
epithelial sac | 2.48e-07 | 25 |
epithelium of foregut-midgut junction | 2.48e-07 | 25 |
anatomical boundary | 2.48e-07 | 25 |
hepatobiliary system | 2.48e-07 | 25 |
foregut-midgut junction | 2.48e-07 | 25 |
septum transversum | 2.48e-07 | 25 |
abdominal segment of trunk | 2.64e-07 | 60 |
abdomen | 2.64e-07 | 60 |
sac | 5.00e-07 | 26 |