FFCP PHASE1:Hg19::chr1:17575584..17575598,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51702 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18337 | |||
|TSSclassifier=weak | |||
|UniProt=Q9ULW8 | |||
|association_with_transcript=0bp_to_ENST00000375460,NM_016233,uc001bai.2_5end | |||
|coexpression_cluster_id=C3356 | |||
|description=CAGE_peak_1_at_PADI3_5end | |||
|id=chr1:17575584..17575598,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.72e-17!254;CL:0002076!6.57e-13!43;CL:0000223!9.01e-11!59;CL:0002202!2.40e-10!9;CL:0002632!2.40e-10!9;CL:0002368!3.66e-10!13;CL:0002322!2.61e-08!5;CL:0000244!4.86e-08!4;CL:0000731!4.86e-08!4;CL:0000082!8.21e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002322;7.18e-15;5!CL:0000244;1.61e-14;4!CL:0000731;1.61e-14;4!CL:0002202;1.19e-11;9!CL:0002632;1.19e-11;9!CL:0002076;2.59e-11;42!CL:0002368;1.48e-10;13!CL:0000307;7.33e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.65e-15,5;CL:0002076,6.69e-15,42;CL:0000223,1.39e-14,58;CL:0000244,1.61e-14,4;CL:0000731,1.61e-14,4;CL:0000066,3.31e-12,253;CL:0002202,1.33e-11,9;CL:0002632,1.33e-11,9;CL:0002368,1.59e-10,13;CL:0000068,8.30e-10,3;CL:0000069,8.30e-10,3;CL:0000307,8.30e-10,3;CL:0000377,8.30e-10,3 | |||
|ontology_enrichment_development_v019=CL:0000377;7.33e-10;3!CL:0000223;7.41e-09;58!UBERON:0007297;4.84e-07;2 | |||
|ontology_enrichment_disease=DOID:1749!1.74e-11!14;DOID:305!2.97e-11!106;DOID:0050687!3.08e-10!143;DOID:162!2.65e-09!235;DOID:14566!8.92e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.18e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.12e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0007196!2.79e-09!14;UBERON:0001558!2.79e-09!14;UBERON:0005178!3.47e-09!34;UBERON:0002224!3.47e-09!34;UBERON:0005181!8.70e-09!35;UBERON:0000464!2.26e-08!104;UBERON:0004119!3.10e-08!169;UBERON:0000925!3.10e-08!169;UBERON:0006595!3.10e-08!169;UBERON:0003135!1.10e-07!11;UBERON:0000466!1.91e-07!126;UBERON:0005177!2.49e-07!107;UBERON:0004802!8.21e-07!19;UBERON:0000115!8.21e-07!19;UBERON:0005153!8.77e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.32e-11;5!UBERON:0001264;1.81e-11;10!UBERON:0006947;7.33e-10;3!UBERON:0004054;7.33e-10;3!UBERON:0005910;1.17e-09;6!UBERON:0002075;4.02e-08;18!UBERON:0005904;1.71e-07;4!UBERON:0000486;8.18e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.32e-11,5;UBERON:0001264,1.80e-11,10;UBERON:0006947,1.03e-09,3;UBERON:0004054,1.03e-09,3;UBERON:0005910,1.17e-09,6;UBERON:0002075,4.00e-08,18;UBERON:0005177,2.01e-07,101;UBERON:0005904,2.19e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0.919421224478927,2.71085326900425,1.10926203050036,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.130979075497713,0.364295288292542,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,1.72082757233402,2.92736894711029,1.32529768321485,1.97529702878181,2.38420426535352,4.03713361401005,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20725313949488,0,0.100528972411631,2.31471112896324,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,3.74935335947108,0,0.141775097242386,0.0895585227028483,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979005787313703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,41.1038264121734,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,2.55225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,2.79044126903985,9.38423185750102,1.08890984861323,0,68.4503542547256,62.3344459970215,99.3283543922154,46.8635736422197,0,0,0,0,0,0,0,0,0,0,26.4643433259514,0,0,0,0,0.199579371432817,0,0.846694330895531,0,0,0,0,0,0,0,0,0,6.87010689511529,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,1.22587722705226,0.568272293612826,0,0,0,0,0,0,0,0,0,0,0,0.511343412510774,0,0,0.0898683511473268,0.179021174675609,0,14.9937976568139,0,0,0,0,0,1.30213880542617,0.0874599999961957,0,8.07933482827048,3.55955110409873,7.09163045303809,1.72371686620732,0,0,0,0,0,0,0,0,0,52.702175337312,0.153900517007594,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,51.4597947791396,0,3.15667522279512,0,0,0,0.901940516486955,0,9.30515421790059,3.30991955875499,12.557316736289,9.55779438183671,0,3.05084280628905,1.04135843001079,0.293977192243133,0.0870592065804026,2.09672001890436,0,0.483781656445426,0.146178634172371,0.328461828212837,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.951329442515298,1.67364554099733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0.643012593860077,0.412618309791701,0,0,0,0,7.37956312718385,0.236417121897595,0.262272940674991,0,0,0,0,0,0,0,0,0,1.19730191562487,0.082092520749339,0,0.226624183040251,0,0,0,0,0.171086837884329,1.40963004463334,0,0,0,0,0,0.121792598380896,2.55336503108073,0,0,0,0,0,0,0,0,0,0,0,0,1.8747061194316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358177682162975,2.47041157728778,0.219284049578707,0,0.192914038270915,0,0.76872455576384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0.619678821295011,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,18.1573279226897,0.589848616738702,26.2302895886001,0,0,0,0,0,0.20170506870352,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,30.2796953505841,0,0,0,0,0,0,5.14464028312255,0,0,0.236387681767936,0,5.18054412813393,0,0.280272163313789,0,15.5467865677407,0,0,0.316027223465453,0,1.04314963381548,0,0,0,0,0.430227358820278,0,0,2.11693525095465,0,0.31020638566432,0,0,0,0,0,0,0,4.37139893753226,0,0,0,0,0.109940516745429,0,0,0,0,5.63841140033983,0,0,0,0,0,0,0,0,9.46335874609985,3.52894871715692,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0.98339014767326,0,1.1218771271618,0.26721740526556,0.551369397209069,2.25636785363138,0.530450887527676,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0.430333232356058,0.665320713092027,0,0,0,5.83863813692815,0,0,0.813792356631477,3.32878387092756,0,0 | |||
|short_description=p1@PADI3 | |||
}} |
Revision as of 16:39, 10 January 2014
Short description: | p1@PADI3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PADI3_5end |
Coexpression cluster: | C3356_Urothelial_cervical_tongue_Neutrophils_keratoacanthoma_uterus_Sebocyte |
Association with transcript: | 0bp_to_ENST00000375460, NM_016233, uc001bai.2_5end |
EntrezGene: | PADI3 |
HGNC: | 18337 |
UniProt: | Q9ULW8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.65e-15 | 5 |
endo-epithelial cell | 6.69e-15 | 42 |
endodermal cell | 1.39e-14 | 58 |
transitional epithelial cell | 1.61e-14 | 4 |
urothelial cell | 1.61e-14 | 4 |
epithelial cell | 3.31e-12 | 253 |
epithelial cell of tracheobronchial tree | 1.33e-11 | 9 |
epithelial cell of lower respiratory tract | 1.33e-11 | 9 |
respiratory epithelial cell | 1.59e-10 | 13 |
duct epithelial cell | 8.30e-10 | 3 |
branched duct epithelial cell | 8.30e-10 | 3 |
tracheal epithelial cell | 8.30e-10 | 3 |
tracheoblast | 8.30e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.32e-11 | 5 |
pancreas | 1.80e-11 | 10 |
male genital duct | 1.03e-09 | 3 |
internal male genitalia | 1.03e-09 | 3 |
transitional epithelium | 1.17e-09 | 6 |
viscus | 4.00e-08 | 18 |
trunk region element | 2.01e-07 | 101 |
duct of male reproductive system | 2.19e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.12e-10 | 14 |