FFCP PHASE1:Hg19::chr1:203152791..203152804,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C283 | |||
|description=CAGE_peak_at_chr1:203152791..203152804,- | |||
|id=chr1:203152791..203152804,- | |||
|ontology_enrichment_celltype=CL:0000153!1.99e-15!9;CL:0000447!1.99e-15!9;CL:0000667!2.31e-12!6;CL:0000058!2.31e-12!6;CL:0000138!2.31e-12!6;CL:0000499!1.44e-10!27;CL:0000135!1.51e-09!3;CL:0000386!1.51e-09!3;CL:0000388!1.51e-09!3;CL:0000327!1.86e-09!14;CL:0000775!4.07e-09!3;CL:0000235!6.81e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000153;2.05e-40;9!CL:0000447;2.05e-40;9!CL:0000138;1.83e-31;6!CL:0000499;2.92e-25;28!CL:0000327;5.75e-24;15!CL:0000135;4.50e-23;3!CL:0000388;4.50e-23;3!CL:0000235;3.32e-20;6!CL:0002540;4.53e-12;6!CL:0000214;4.32e-11;3!CL:0000775;1.23e-10;3!CL:0000151;7.88e-08;36!CL:0002092;1.99e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.72e-40,9;CL:0000447,1.72e-40,9;CL:0000058,1.57e-31,6;CL:0000138,1.57e-31,6;CL:0000499,2.50e-25,28;CL:0000327,5.19e-24,15;CL:0000135,3.59e-23,3;CL:0000388,3.59e-23,3;CL:0000235,3.40e-20,6;CL:0002540,4.88e-12,6;CL:0000214,4.21e-11,3;CL:0000775,1.14e-10,3;CL:0000151,1.54e-09,36;CL:0000134,5.99e-08,354;CL:0002320,1.04e-07,361;CL:0002092,2.08e-07,10;CL:0000219,7.18e-07,386 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.65e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;6.40e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,5.70e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000043!1.51e-09!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.50e-23;3!UBERON:0000043;4.50e-23;3!UBERON:0007845;4.50e-23;3!UBERON:0006915;4.32e-11;3!UBERON:0007616;4.32e-11;3!UBERON:0002217;4.32e-11;3!UBERON:0002018;4.32e-11;3!UBERON:0002363;1.65e-08;1!UBERON:0001282;1.65e-08;1!UBERON:0009842;1.65e-08;1!UBERON:0003704;1.65e-08;1!UBERON:0001171;1.65e-08;1!UBERON:0001172;1.65e-08;1!UBERON:0004457;5.33e-08;9!UBERON:0000042;5.33e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,3.59e-23,3;UBERON:0000043,3.59e-23,3;UBERON:0007845,3.59e-23,3;UBERON:0006915,4.21e-11,3;UBERON:0007616,4.21e-11,3;UBERON:0002217,4.21e-11,3;UBERON:0002018,4.21e-11,3;UBERON:0001282,1.22e-08,1;UBERON:0009842,1.22e-08,1;UBERON:0003704,1.22e-08,1;UBERON:0001171,1.22e-08,1;UBERON:0001172,1.22e-08,1;UBERON:0002363,2.06e-08,1;UBERON:0007645,2.06e-08,1;UBERON:0007647,2.06e-08,1;UBERON:0010115,2.06e-08,1;UBERON:0002384,2.19e-07,371 | |||
|phase1_expression=0,0.428201047781966,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,1.80719576192283,9.02408239144601,7.38717246700201,6.36228757640879,6.32625331393427,0,0,0,0,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709336764396714,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9313088667105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,12.8702345826581,5.49935300468294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,4.21667878966063,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0,0,0.749007023947182,2.99161459204025,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.614014698904518,0,0,0.290033387828457,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,4.22215270595328,7.57378253807774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921722292925374,0.894704431569664,1.16794399198336,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,1.82307289355202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,1.0741718536843,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,1.17241786942466,0,0.129282956361551,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,5.11388114242741,19.3707284349483,5.33886732957922,0,0.151230923763239,0,0,0,0,0,0,0,0,0.601030435988874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438568099157414,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,5.65910431143481,0.135939465953663,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828864656652147,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46394021800102,46.2175628631418,1.29787968637137,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr1:203152791..203152804,- | |||
}} |
Revision as of 23:28, 10 January 2014
Short description: | p@chr1:203152791..203152804, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:203152791..203152804, - |
Coexpression cluster: | C283_tenocyte_Chondrocyte_mesenchymal_Macrophage_pleomorphic_Synoviocyte_cholangiocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.72e-40 | 9 |
carbohydrate secreting cell | 1.72e-40 | 9 |
chondroblast | 1.57e-31 | 6 |
chondrocyte | 1.57e-31 | 6 |
stromal cell | 2.50e-25 | 28 |
extracellular matrix secreting cell | 5.19e-24 | 15 |
fibrocyte | 3.59e-23 | 3 |
tendon cell | 3.59e-23 | 3 |
macrophage | 3.40e-20 | 6 |
mesenchymal stem cell of the bone marrow | 4.88e-12 | 6 |
synovial cell | 4.21e-11 | 3 |
neutrophil | 1.14e-10 | 3 |
secretory cell | 1.54e-09 | 36 |
mesenchymal cell | 5.99e-08 | 354 |
connective tissue cell | 1.04e-07 | 361 |
bone marrow cell | 2.08e-07 | 10 |
motile cell | 7.18e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 3.59e-23 | 3 |
tendon | 3.59e-23 | 3 |
regular connective tissue | 3.59e-23 | 3 |
stratified squamous epithelium | 4.21e-11 | 3 |
layer of synovial tissue | 4.21e-11 | 3 |
synovial joint | 4.21e-11 | 3 |
synovial membrane of synovial joint | 4.21e-11 | 3 |
intralobular bile duct | 1.22e-08 | 1 |
acinus | 1.22e-08 | 1 |
intrahepatic bile duct | 1.22e-08 | 1 |
portal lobule | 1.22e-08 | 1 |
hepatic acinus | 1.22e-08 | 1 |
dura mater | 2.06e-08 | 1 |
future meninx | 2.06e-08 | 1 |
ectomeninx | 2.06e-08 | 1 |
future dura mater | 2.06e-08 | 1 |
connective tissue | 2.19e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 5.70e-09 | 1 |