FFCP PHASE1:Hg19::chr1:59250262..59250296,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3725 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6204 | |||
|TSSclassifier=weak | |||
|UniProt=P05412 | |||
|association_with_transcript=-477bp_to_ENST00000371222,NM_002228,uc001cze.2_5end | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_5_at_JUN_5end | |||
|id=chr1:59250262..59250296,- | |||
|ontology_enrichment_celltype=CL:0002057!7.06e-21!42;CL:0000860!2.65e-20!45;CL:0000738!4.85e-19!140;CL:0002087!3.13e-18!119;CL:0002031!3.59e-18!124;CL:0000557!4.05e-11!71;CL:0000766!7.90e-11!76;CL:0002009!1.41e-10!65;CL:0000037!1.46e-10!172;CL:0000566!1.46e-10!172;CL:0000988!1.81e-10!182;CL:0002032!4.89e-10!165;CL:0000837!4.89e-10!165;CL:0000839!5.08e-10!70;CL:0002194!6.95e-10!63;CL:0000576!6.95e-10!63;CL:0000040!6.95e-10!63;CL:0000559!6.95e-10!63;CL:0000838!5.04e-08!52;CL:0000542!1.27e-07!53;CL:0000051!1.27e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.25e-21;33!CL:0002057;4.25e-21;33!CL:0000624;9.16e-17;6!CL:0000473;3.01e-14;39!CL:0000234;3.01e-14;39!CL:0000576;1.70e-12;48!CL:0002087;3.75e-12;104!CL:0000791;1.56e-11;18!CL:0000789;1.56e-11;18!CL:0002419;1.56e-11;18!CL:0000623;4.60e-10;3!CL:0000542;4.71e-10;53!CL:0000084;1.19e-09;25!CL:0000766;2.08e-09;69!CL:0000898;4.14e-09;3!CL:0000738;2.33e-07;136!CL:0000236;3.61e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.47e-31,115;CL:0000738,4.17e-31,136;CL:0002031,3.18e-28,120;CL:0000860,4.84e-23,42;CL:0002057,4.84e-23,42;CL:0000037,6.64e-23,168;CL:0000988,2.57e-22,177;CL:0002032,9.07e-22,161;CL:0000837,9.07e-22,161;CL:0000473,1.90e-19,48;CL:0000234,1.90e-19,48;CL:0000624,9.43e-17,6;CL:0002009,1.73e-15,61;CL:0000838,4.08e-15,52;CL:0000766,9.61e-15,72;CL:0000542,9.83e-15,53;CL:0000051,9.83e-15,53;CL:0002194,1.92e-14,59;CL:0000576,1.92e-14,59;CL:0000040,1.92e-14,59;CL:0000559,1.92e-14,59;CL:0000557,1.29e-13,67;CL:0000839,2.27e-12,66;CL:0000791,1.54e-11,18;CL:0000789,1.54e-11,18;CL:0002420,1.54e-11,18;CL:0002419,1.54e-11,18;CL:0000790,1.54e-11,18;CL:0000623,4.44e-10,3;CL:0000825,4.44e-10,3;CL:0000084,1.30e-09,25;CL:0000827,1.30e-09,25;CL:0000898,4.53e-09,3;CL:0000763,6.97e-09,108;CL:0000049,6.97e-09,108;CL:0000134,1.44e-07,354;CL:0002320,3.36e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;9.34e-17;42!CL:0000790;1.56e-11;18!CL:0000051;4.71e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.09e-08!80;UBERON:0002390!3.10e-08!102;UBERON:0003061!3.10e-08!102;UBERON:0002193!7.29e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.15e-11,98;UBERON:0003061,1.15e-11,98;UBERON:0002371,2.29e-11,76;UBERON:0001474,3.78e-10,82;UBERON:0002193,5.30e-10,108;UBERON:0002405,2.23e-09,93;UBERON:0004765,8.67e-09,90;UBERON:0001434,2.08e-07,100 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,2.53299878168311,0,0.261185628199839,0.245733936501509,0,0.436882744260345,0,0.123766352960047,0.331397375727916,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0.273748850145768,0.125542639594803,0.0764134057479513,0.246301768349837,0,0,1.15148819429164,1.08371286321253,0.919421224478927,0.6024118375565,0,0,0,0,1.10799081706375,1.60435557976113,3.25516306073778,0,0,0,0.872389432677388,0.377875943688809,0.727752183563449,0.232429036905685,1.6446715520873,0.929119112685311,2.8769239232215,2.30544635876191,1.18241114944293,2.06847408441971,2.5819387343353,2.70852973188684,1.12945403725563,0.272906150057846,0.898893937780338,3.06083892370903,2.24650318953266,3.19668562899521,0.659702600373432,1.19678194572979,1.27867425159808,0.580418477257168,1.70215567407342,0.622822248995575,2.76373531782418,1.5644487552606,1.73751075764093,0.605399502633369,0.736555271975129,1.26584954976354,0.211255286311942,0.212604299965044,0.209658645508376,0.336985893439485,0.450530678524519,0,0.285012743741249,0.19891667719909,0.365328307529268,1.75996244461323,1.09227722252426,0,2.13365111283254,0.400395987036012,0.574752439954483,0,0.954053754535364,2.27685187643779,4.69789751496751,2.6759125968766,0,1.12101712596307,0.263384084775077,1.37696839079683,3.93010762749165,4.5232329779892,0.501559486172034,2.93330039970231,1.4203434172042,0,0,1.17842362989935,2.21533894583621,2.43723477388514,0.512365278902701,0.780356085359269,0.164437904603676,0,0.289803085735052,2.66915813691709,2.40786745280742,1.04535523804977,0.113309342697566,3.06576394881537,7.21617635513523,3.28925599625354,0.637130828648193,0,0,0.301150238155546,0.383959833463255,0,0.710331756132051,0,3.83052812126992,4.81392352410313,4.34473211648397,0,0,0.12786256184353,0.361439152384566,0,0,0,0.486634870302636,0.283604451492204,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0.860234595106124,0,1.69592382577203,0.419499436209906,0,0.835979866147242,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,1.53316637465883,0.949265659568129,0.366403487860815,1.31780417436063,0,0.436094052142534,0.496971951695318,0.12663051166458,0.264818361626438,0,0,0,0,0.24666754841716,0,0.404132016209064,0.490385709340376,0,0.576175924479999,0.468642863667593,0.312160076830321,0.570471821544449,0,0.117434498643765,0.161872944368132,0.421352420106746,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0.30648779579902,0.150238058906597,0,0,0,0,0.300091096084402,0,0.772921620136887,0,0.168776332241266,0,0,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0.220587945464788,0.217879444092406,0,0,0,0,0.738155454624648,0,0.8231480226628,1.47008711385542,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0,2.37061319387782,1.71697232418975,0,0,0,0,0,0.141775097242386,0.268675568108545,0.290633938513962,0.383382679165211,0.492663237895943,0,0.414656231081544,0.432359860250884,0.88369703398466,0,0,0,0,0.308482478109971,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,1.08524321078289,0.823240336780769,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,3.34952292343276,7.54696512008311,6.93052395910641,0.508189248444927,0,0,0.167516265334349,0.637938751653163,0,0,0.414415513436035,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0,0,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0.620304078368662,1.72571360654893,1.60091336705167,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.120859449591622,0.802025881213139,0.0920809889358963,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,1.54227252690289,0.541892875087706,0.501689773854853,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0.170453254832202,0,0,0.384380134730212,0.255225424989168,0.10115778085555,0.464845549297286,0.62962469366128,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0,0,0,0,0,0,0,0,0.421258456238981,0,1.46228093778771,0,0.272999822815972,0,0,0.551365343546124,0,0.876901770507525,0,0.655894752046633,0.202910376962704,0.30982349809975,1.40847801266121,0,0,0.35667105148125,0,0.422215270595328,0,0,0,0.0962221127255121,1.34060455107157,1.08890984861323,0,0,1.68471475667626,0,0.229723400206959,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0.18714054040822,0,0,0.334330152832435,0,0.71623345421307,0,0.307160702099232,0,0.281338832821026,0,0.329607748453519,0,0.19924798825107,0,0,0.10226868250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| |||
|short_description=p5@JUN | |||
}} |
Revision as of 18:43, 10 January 2014
Short description: | p5@JUN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_JUN_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | -477bp_to_ENST00000371222, NM_002228, uc001cze.2_5end |
EntrezGene: | JUN |
HGNC: | 6204 |
UniProt: | P05412 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.15e-11 | 98 |
blood island | 1.15e-11 | 98 |
bone marrow | 2.29e-11 | 76 |
bone element | 3.78e-10 | 82 |
hemolymphoid system | 5.30e-10 | 108 |
immune system | 2.23e-09 | 93 |
skeletal element | 8.67e-09 | 90 |
skeletal system | 2.08e-07 | 100 |