FFCP PHASE1:Hg19::chr21:39627877..39627884,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr21:39627877..39627884,+ | |||
|id=chr21:39627877..39627884,+ | |||
|ontology_enrichment_celltype=CL:1001319!8.95e-20!1;CL:1000600!8.95e-20!1;CL:0000244!3.26e-19!4;CL:0000731!3.26e-19!4;CL:0000317!1.89e-10!2;CL:1000448!1.89e-10!2;CL:0002308!1.89e-10!2;CL:0002140!1.89e-10!2;CL:0000054!2.72e-10!2;CL:0000137!2.72e-10!2;CL:0000092!2.72e-10!2;CL:0002328!2.63e-07!3;CL:0002166!2.97e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:1001319;1.55e-98;1!CL:1000600;1.55e-98;1!CL:0000244;6.30e-26;4!CL:0000731;6.30e-26;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,9.37e-99,1;CL:1000600,9.37e-99,1;CL:0000244,7.14e-26,4;CL:0000731,7.14e-26,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060085!3.25e-19!1;DOID:3165!3.25e-19!1;DOID:0060121!3.25e-19!1;DOID:2438!3.25e-19!1;DOID:4418!3.25e-19!1;DOID:200!2.72e-10!2;DOID:4305!2.72e-10!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!1.79e-33!5;UBERON:0005910!4.92e-28!6;UBERON:0004645!8.95e-20!1;UBERON:0001256!8.95e-20!1;UBERON:0001259!8.95e-20!1;UBERON:0001255!1.43e-10!2;UBERON:0001556!1.43e-10!2;UBERON:0002419!1.89e-10!2;UBERON:0007771!1.89e-10!2;UBERON:0003297!1.89e-10!2;UBERON:0001821!1.89e-10!2;UBERON:0003487!1.89e-10!2;UBERON:0001820!1.89e-10!2;UBERON:0005089!1.89e-10!2;UBERON:0005088!1.89e-10!2;UBERON:0004815!2.63e-07!3;UBERON:0002031!2.63e-07!3;UBERON:0006554!6.33e-07!44;UBERON:0001008!8.92e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;1.55e-98;1!UBERON:0001256;1.55e-98;1!UBERON:0001259;1.55e-98;1!UBERON:0000365;3.49e-79;5!UBERON:0005910;2.83e-66;6!UBERON:0001255;3.52e-50;2!UBERON:0001556;3.52e-50;2!UBERON:0000486;5.97e-34;12!UBERON:0006554;1.90e-14;30!UBERON:0001008;1.90e-14;30!UBERON:0003350;1.00e-13;8!UBERON:0005911;1.47e-07;36!UBERON:0002075;7.39e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,9.37e-99,1;UBERON:0001256,9.37e-99,1;UBERON:0001259,9.37e-99,1;UBERON:0000365,3.49e-79,5;UBERON:0005910,2.83e-66,6;UBERON:0001255,2.74e-50,2;UBERON:0001556,2.74e-50,2;UBERON:0003350,9.39e-14,8;UBERON:0006554,1.08e-09,47;UBERON:0001008,1.62e-09,48;UBERON:0000162,1.86e-08,14;UBERON:0001353,1.86e-08,14;UBERON:0000163,1.86e-08,14;UBERON:0006866,1.86e-08,14;UBERON:0000164,1.86e-08,14;UBERON:0000931,1.86e-08,14;UBERON:0004122,5.55e-08,15;UBERON:0002075,7.18e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0.765676274967505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54666210360852,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr21:39627877..39627884,+ | |||
}} |
Revision as of 13:43, 21 January 2014
Short description: | p@chr21:39627877..39627884, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr21:39627877..39627884, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 9.37e-99 | 1 |
lower urinary tract cell | 9.37e-99 | 1 |
transitional epithelial cell | 7.14e-26 | 4 |
urothelial cell | 7.14e-26 | 4 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 9.37e-99 | 1 |
wall of urinary bladder | 9.37e-99 | 1 |
mucosa of urinary bladder | 9.37e-99 | 1 |
urothelium | 3.49e-79 | 5 |
transitional epithelium | 2.83e-66 | 6 |
urinary bladder | 2.74e-50 | 2 |
lower urinary tract | 2.74e-50 | 2 |
epithelium of mucosa | 9.39e-14 | 8 |
urinary system structure | 1.08e-09 | 47 |
renal system | 1.62e-09 | 48 |
cloaca | 1.86e-08 | 14 |
anal region | 1.86e-08 | 14 |
embryonic cloaca | 1.86e-08 | 14 |
terminal part of digestive tract | 1.86e-08 | 14 |
primitive urogenital sinus | 1.86e-08 | 14 |
proctodeum | 1.86e-08 | 14 |
genitourinary system | 5.55e-08 | 15 |
viscus | 7.18e-07 | 18 |