FFCP PHASE1:Hg19::chr2:114300263..114300269,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-14bp_to_ENST00000416758_5end | |||
|description=CAGE_peak_1_at_ENST00000416758_5end | |||
|id=chr2:114300263..114300269,- | |||
|ontology_enrichment_celltype=CL:0002622!5.30e-10!3;CL:0002504!5.79e-10!3;CL:1000279!5.79e-10!3;CL:1000280!5.79e-10!3;CL:0002586!1.16e-09!3;CL:0000149!2.52e-07!4;CL:1000487!5.11e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002504;5.35e-40;3!CL:1000279;5.35e-40;3!CL:1000280;5.35e-40;3!CL:0002622;6.34e-19;3!CL:0002586;1.55e-18;3!CL:0002574;2.11e-14;1!CL:0000149;3.73e-14;4!CL:1000487;4.09e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,8.55e-40,3;CL:1000279,8.55e-40,3;CL:1000280,8.55e-40,3;CL:0002622,6.63e-19,3;CL:0002586,1.36e-18,3;CL:0002574,3.15e-14,1;CL:0000149,3.37e-14,4;CL:1000487,4.09e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;3.56e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,3.56e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001046!2.12e-13!19;UBERON:0007023!4.50e-13!115;UBERON:0002367!1.48e-12!11;UBERON:0010147!1.48e-12!11;UBERON:0009846!1.48e-12!11;UBERON:0003353!1.48e-12!11;UBERON:0004902!1.48e-12!11;UBERON:0003820!1.48e-12!11;UBERON:0009847!1.48e-12!11;UBERON:0000162!3.68e-12!14;UBERON:0001353!3.68e-12!14;UBERON:0000163!3.68e-12!14;UBERON:0006866!3.68e-12!14;UBERON:0000164!3.68e-12!14;UBERON:0000931!3.68e-12!14;UBERON:0003296!5.53e-12!4;UBERON:0010133!5.53e-12!4;UBERON:0003937!2.08e-11!12;UBERON:0005399!2.08e-11!12;UBERON:0004122!3.01e-11!15;UBERON:0001781!1.16e-09!3;UBERON:0001782!1.16e-09!3;UBERON:0005424!1.16e-09!3;UBERON:0000966!1.23e-09!5;UBERON:0005388!1.23e-09!5;UBERON:0001802!1.23e-09!5;UBERON:0003101!2.35e-07!22;UBERON:0000079!2.35e-07!22;UBERON:0001905!4.55e-07!2;UBERON:0002757!4.55e-07!2;UBERON:0010134!4.55e-07!2;UBERON:0002784!4.55e-07!2;UBERON:0005408!4.55e-07!2;UBERON:0001899!4.55e-07!2;UBERON:0001894!8.01e-07!7;UBERON:0006222!8.01e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;1.55e-18;3!UBERON:0001782;1.55e-18;3!UBERON:0001155;8.21e-14;9!UBERON:0000160;5.51e-12;17!UBERON:0002367;1.16e-11;11!UBERON:0010147;1.16e-11;11!UBERON:0000966;1.62e-11;5!UBERON:0005388;1.62e-11;5!UBERON:0001802;1.62e-11;5!UBERON:0000059;2.07e-11;11!UBERON:0003937;9.77e-11;12!UBERON:0005399;9.77e-11;12!UBERON:0005409;1.96e-09;22!UBERON:0001135;1.62e-08;15!UBERON:0000077;3.35e-08;27!UBERON:0001905;7.52e-08;2!UBERON:0002757;7.52e-08;2!UBERON:0010134;7.52e-08;2!UBERON:0005408;7.52e-08;2!UBERON:0001899;7.52e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.36e-18,3;UBERON:0005424,1.36e-18,3;UBERON:0001781,3.37e-14,4;UBERON:0001155,9.57e-14,9;UBERON:0005409,1.30e-12,25;UBERON:0000160,6.10e-12,17;UBERON:0002367,1.18e-11,11;UBERON:0010147,1.18e-11,11;UBERON:0009846,1.18e-11,11;UBERON:0003353,1.18e-11,11;UBERON:0004902,1.18e-11,11;UBERON:0003820,1.18e-11,11;UBERON:0009847,1.18e-11,11;UBERON:0000059,2.34e-11,11;UBERON:0003937,9.93e-11,12;UBERON:0005399,9.93e-11,12;UBERON:0000966,8.86e-10,6;UBERON:0005388,8.86e-10,6;UBERON:0001802,8.86e-10,6;UBERON:0000162,2.83e-09,14;UBERON:0001353,2.83e-09,14;UBERON:0000163,2.83e-09,14;UBERON:0006866,2.83e-09,14;UBERON:0000164,2.83e-09,14;UBERON:0000931,2.83e-09,14;UBERON:0004122,1.08e-08,15;UBERON:0001135,1.78e-08,15;UBERON:0001905,6.58e-08,2;UBERON:0002757,6.58e-08,2;UBERON:0010134,6.58e-08,2;UBERON:0005408,6.58e-08,2;UBERON:0001899,6.58e-08,2;UBERON:0000077,1.14e-07,29;UBERON:0001046,5.75e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,4.44015567939725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04260337361699,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,2.52591785962135,0.728364672026868,6.42509633301178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,1.53870075069834,0.328014645699706,2.60302715731442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.31693898199955,1.09814811894422,1.17812402345686,0,0,0,0,0,0,0.409499734223957,5.79762271010222,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0.857974989309823,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.209818352539992,0.316801009558219,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0.544017803369474,0,0,3.60659893780785,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2249819094128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0.163771917510097,0,0,0,0,0.0634158101939068,0,0,0,0,0,1.60710550763486,0.672567444437648,0.606965604236632,0.227662191351298,0.177404740325278,0,0,0.0679697329768317,0,0,0.556157009460346,0.549451649953598,0.157115589916002,0,0.913158720509496,0,0,0.285906176706625,0,0,0,15.2325159298748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0.109940516745429,0,0,0.437119121007915,0,0.245148321753905,0,0.196308467114945,0,0,0,0.657887425858975,1.99819452718089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0,0,0,0,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0.611207220914332,0,0,0,0 | |||
|short_description=p1@ENST00000416758 | |||
}} |
Revision as of 05:06, 21 January 2014
Short description: | p1@ENST00000416758 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000416758_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_ENST00000416758_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 8.55e-40 | 3 |
smooth muscle cell of large intestine | 8.55e-40 | 3 |
smooth muscle cell of colon | 8.55e-40 | 3 |
prostate stromal cell | 6.63e-19 | 3 |
retinal pigment epithelial cell | 1.36e-18 | 3 |
stromal cell of pancreas | 3.15e-14 | 1 |
visual pigment cell | 3.37e-14 | 4 |
smooth muscle cell of prostate | 4.09e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
teratoma | 3.56e-08 | 2 |