FFCP PHASE1:Hg19::chr2:136664715..136664723,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:136664715..136664723,- | |||
|id=chr2:136664715..136664723,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002127;9.72e-14;1!CL:0000911;9.72e-14;1!CL:0000814;9.72e-14;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.61e-13,1;CL:0000914,1.61e-13,1;CL:0000911,1.61e-13,1;CL:0000814,1.61e-13,1;CL:0002042,1.61e-13,1;CL:0002039,1.61e-13,1;CL:0002040,1.61e-13,1;CL:0002041,1.61e-13,1;CL:0000893,2.12e-07,2;CL:0002489,2.12e-07,2;CL:0000809,2.12e-07,2;CL:0000808,2.12e-07,2;CL:0000894,2.12e-07,2;CL:0000806,2.12e-07,2;CL:0000807,2.12e-07,2;CL:0000805,2.12e-07,2;CL:0002425,2.12e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002425;1.64e-07;2 | |||
|ontology_enrichment_disease=DOID:14566!1.79e-17!239;DOID:162!5.51e-16!235;DOID:0050687!1.56e-11!143;DOID:305!9.29e-08!106;DOID:2531!2.12e-07!51;DOID:0060083!2.12e-07!51;DOID:0050686!5.59e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:4468;9.24e-08;2!DOID:154;1.64e-07;2!DOID:4236;1.64e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,9.25e-08,2;DOID:154,1.28e-07,2;DOID:4236,1.28e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;9.72e-14;1!UBERON:0006518;9.72e-14;1!UBERON:0008949;9.72e-14;1!UBERON:0000101;9.72e-14;1!UBERON:0002167;9.72e-14;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,5.15e-14,1;UBERON:0006518,5.15e-14,1;UBERON:0008949,5.15e-14,1;UBERON:0000101,5.15e-14,1;UBERON:0002167,5.15e-14,1 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,1.0007329835313,0.893922188854576,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0.247532705920093,0,0,0,0,0,0,0,0.313454721478088,0,0.273748850145768,0.251085279189606,0.687720651731561,0.492603536699674,0.157421562627358,0,0,0,0,0,0,0.309868802321207,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0.294605907474837,0,0,0.640456598628376,0.520237390239513,0,0.276350017785848,0,0.14828656316206,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0.289648807765598,2.43806866313962,0,0,0,0,0.434539556882471,0.795285947051099,0,0,0.221729397462564,0.351339142772504,0,0.364295288292542,0,0,0,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0.404132016209064,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0.375355559615893,0,0,0.30648779579902,0.150238058906597,0.340296549480063,0,0.213557388818567,0.423863802319124,0.600182192168805,0.206105058476878,0.257640540045629,0,0.168776332241266,0.0974370051611986,1.00973509697646,0.0920498986422993,0,0.710019185033229,0,0,0.386521706326594,0.818238361772504,0.286804595389004,0.243947412259191,0.132529768321485,0.580969714347592,0.310983165046111,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0,0,0.392442930250692,0,0,0,0,0,1.26755034821831,0,0,0.441463099414651,0.122988438543114,0,0.109750285408626,0,0.402115889646523,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0.380508304469197,0,0,0,0.234004265139238,0,0,0,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.57191197463259,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0.289562613335158,0.410952645100767,0,1.00876629594175,0,0,0.256686072559497,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.623912584592421,0.178428988797162,0.315404830067869,0.468565659970853,0,0,0,0.664225598535437,0,0.173767228936166,0,0,0.413536052245775,0,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0.308419387605311,0,0.164254312027618,0,0.116210378459959,0.241718899183244,0,0.276242966807689,0,0.182091168006717,0.262248829918848,0,0.231046011313244,0,0,0.211103257785751,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0.290012154876366,0,0.15350367472613,0.137836572484531,0.214840489736547,0.290033387828457,0.255679882248303,0.178064071293475,0.330569830721956,0.576570202095319,0,0.10115778085555,0.464845549297286,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0.353437207037059,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.476463550915578,0.411362273086194,0,0,0,0.106824071127473,0,0.490080431962063,0.557409525377156,0.144269212976445,0.355709216742071,0.797131363644112,0.59873811429845,0.191505370132367,0.635020748171649,1.29848776109822,0,0.912938716132769,0.47003968731907,0,0.677167111206413,0,0.403599414382095,0,0,0.307240764308458,0.223676107892416,0,0.781552381608161,0,0,0,0,0,0.37428108081644,0.146508179271894,0.121360521749513,0.445773537109913,0.284136146806413,0.47748896947538,0,0.921482106297696,0,0.281338832821026,0.222617410045812,0.494411622680279,0.422250816255987,0,0,0.251932747854276,0,0.123084805461069,0.311039587661807,0.179736702294654,0.358042349351218,0.511572370226872,0,0,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0,0.472775363535873,0.689486746482929,0.291604613383254,0.173624994933292,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0,0.32681539055697,0,0.153900517007594,0.113942055847001,0,0.448788222048861,0.760531603454056,0.31900115973192,0,0.533034776018635,0,0.470940769185074,0,0.225595660617181,0.392125068635479,0,0.569261198172555,0.158936578980379,4.00896322603251,0.816164040795739,0.141353071433941,0.216388639742091,0,0,0,0.296521128680622,0.247127877893006,0.417687798021821,0,0,0.234264445725339,0.547364367646998,0,0.728341138602278,0.394584402849391,0,0,0.126373159256976,0.150323419414493,0.207376382794494,0,0,0,0,0.569219092059585,0.693373365065693,0.347119476670262,0.0979923974143777,0.174118413160805,0.698906672968121,0.171986032471617,0.19351266257817,0.292357268344742,0.164230914106418,0,0,0,0.137041924646751,0.19871461170299,0.0633107959558787,0,0,0,0,0.432271251462318,0.114536596165916,0,0.576219191952599,0.124252535565433,0,0.135904206073614,0.209205692624666,0.101998217636322,0,0,0.136905378891993,0,0,0.262887354279314,0.279282401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| |||
|short_description=p@chr2:136664715..136664723,- | |||
}} |
Revision as of 05:34, 21 January 2014
Short description: | p@chr2:136664715..136664723, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr2:136664715..136664723, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.61e-13 | 1 |
immature NK T cell | 1.61e-13 | 1 |
effector T cell | 1.61e-13 | 1 |
mature NK T cell | 1.61e-13 | 1 |
immature NK T cell stage IV | 1.61e-13 | 1 |
immature NK T cell stage I | 1.61e-13 | 1 |
immature NK T cell stage II | 1.61e-13 | 1 |
immature NK T cell stage III | 1.61e-13 | 1 |
thymocyte | 2.12e-07 | 2 |
double negative thymocyte | 2.12e-07 | 2 |
double-positive, alpha-beta thymocyte | 2.12e-07 | 2 |
DN4 thymocyte | 2.12e-07 | 2 |
DN1 thymic pro-T cell | 2.12e-07 | 2 |
DN2 thymocyte | 2.12e-07 | 2 |
DN3 thymocyte | 2.12e-07 | 2 |
immature single positive thymocyte | 2.12e-07 | 2 |
early T lineage precursor | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 5.15e-14 | 1 |
right lung lobe | 5.15e-14 | 1 |
lower lobe of lung | 5.15e-14 | 1 |
lobe of lung | 5.15e-14 | 1 |
right lung | 5.15e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 9.25e-08 | 2 |
mixed cell type cancer | 1.28e-07 | 2 |
carcinosarcoma | 1.28e-07 | 2 |