FFCP PHASE1:Hg19::chr2:175653511..175653516,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:175653511..175653516,+ | |||
|id=chr2:175653511..175653516,+ | |||
|ontology_enrichment_celltype=CL:0002620!5.94e-17!23;CL:0000057!1.54e-12!75;CL:0000055!9.76e-10!180;CL:0000133!3.36e-08!59;CL:0000128!1.65e-07!7;CL:0000126!1.65e-07!7;CL:0000127!1.65e-07!7;CL:0002453!1.65e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.82e-21;23!CL:0002322;6.98e-16;5!CL:0002559;6.78e-12;5!CL:0000128;1.62e-11;7!CL:0000126;1.62e-11;7!CL:0000127;1.62e-11;7!CL:0002605;2.31e-10;3!CL:0002556;9.11e-09;6!CL:0002561;2.13e-08;2!CL:0000057;3.75e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.37e-21,23;CL:0002322,8.85e-16,5;CL:0000057,4.08e-12,76;CL:0002559,6.15e-12,5;CL:0000128,1.32e-11,7;CL:0000126,1.32e-11,7;CL:0000127,1.32e-11,7;CL:0002453,1.32e-11,7;CL:0002605,1.58e-10,3;CL:0002556,1.37e-08,6;CL:0002561,2.18e-08,2;CL:0000221,1.25e-07,72;CL:0000133,2.70e-07,59;CL:0000333,7.25e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.51e-11;5!DOID:450;2.51e-11;5!DOID:66;2.51e-11;5!DOID:423;2.51e-11;5!DOID:0080000;2.51e-11;5!DOID:11722;2.51e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.22e-11,5;DOID:450,3.22e-11,5;DOID:66,3.22e-11,5;DOID:423,3.22e-11,5;DOID:0080000,3.22e-11,5;DOID:11722,3.22e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.01e-11!45;UBERON:0002416!1.01e-11!45;UBERON:0002097!5.81e-11!40;UBERON:0000956!7.14e-10!25;UBERON:0000203!7.14e-10!25;UBERON:0003102!1.17e-08!95;UBERON:0001869!3.74e-08!32;UBERON:0000153!4.42e-08!129;UBERON:0007811!4.42e-08!129;UBERON:0000033!4.52e-08!123;UBERON:0001950!9.27e-08!20;UBERON:0002619!1.58e-07!22;UBERON:0001893!2.53e-07!34;UBERON:0002067!2.69e-07!9;UBERON:0004016!2.69e-07!9;UBERON:0010083!2.69e-07!9;UBERON:0002791!7.20e-07!33;UBERON:0000955!9.17e-07!69;UBERON:0006238!9.17e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.98e-15;41!UBERON:0003102;4.91e-12;50!UBERON:0002073;6.78e-12;5!UBERON:0002199;9.50e-12;46!UBERON:0002416;9.50e-12;46!UBERON:0002067;5.53e-09;9!UBERON:0001758;9.11e-09;6!UBERON:0003672;9.11e-09;6!UBERON:0005933;2.13e-08;2!UBERON:0005942;2.13e-08;2!UBERON:0005932;2.13e-08;2!UBERON:0003129;1.62e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.00e-19,41;UBERON:0002199,1.99e-19,46;UBERON:0002416,1.99e-19,46;UBERON:0003102,4.21e-13,99;UBERON:0002073,6.15e-12,5;UBERON:0005086,6.15e-12,5;UBERON:0002067,3.43e-09,9;UBERON:0004016,3.43e-09,9;UBERON:0010083,3.43e-09,9;UBERON:0001758,1.37e-08,6;UBERON:0003672,1.37e-08,6;UBERON:0005933,2.18e-08,2;UBERON:0005942,2.18e-08,2;UBERON:0005932,2.18e-08,2;UBERON:0003129,2.29e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0,0,0,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,1.35433163884467,0.612002073732759,2.5076377718247,1.43117993565528,1.77936752594749,2.25976751270645,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0,0.232429036905685,0.411167888021826,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0.645484683583826,1.35426486594342,0.188242339542605,0,0.898893937780338,0.306083892370903,0,1.27867425159808,0,0,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,1.52032191293582,0,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.411202997999018,0,0.32592226663359,0.473447805734733,0,0,0,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0.221729397462564,0.263504357079378,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0.570471821544449,0.298897361103602,1.29177948508141,1.94247533241758,1.82586048712923,0.61246251376468,0.737005903870608,1.54988671763648,0,0.494533858557114,0,0,1.17835279767846,0.375355559615893,0.277064115484183,2.19488810440419,1.83892677479412,1.05166641234618,0,6.27863724911017,0.85422955527427,1.27159140695737,3.30100205692843,2.57631323096097,6.44101350114073,0.558350568994769,1.5189869901714,0.292311015483596,4.03894038790583,1.28869858099219,0.646584227275248,2.13005755509969,0.604512589365842,1.69560592310488,0,0,0,1.82960559194393,1.59035721985782,1.16193942869518,1.34759371519982,2.01856680700503,2.91981887260664,7.8224766164908,0.643240938192885,2.76269842704961,12.0735661288315,7.21879481669586,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0,0.882926198829301,0,0.171567810298526,0,0,0,0,0.977424915930974,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24396869324463,0.864719720501769,0.37872730027914,0.253991577168676,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0,3.57656445851882,0,0,0,0.257207374262142,0,0.532844358032199,0,0,1.64648067356154,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0,0.184369168541703,1.21637060255316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.710246901252508,0.164254312027618,0.519254429183621,0,0,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0.827019434907183,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0,0,0,0,1.95053495635836,0,0,0.136499911407986,0,0,0,0,0,0,1.9676842561399,0,0,0,0.143411352204052,0.0982490410131212,0,0.354761064070598,0,0,0.75894634753143,1.39973888097993,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0.140669416410513,0.222617410045812,0,0,0,0,0,0.20453736500431,0,0,0.0898683511473268,0,0,0,0,0,1.93866549219044,0.371072392647405,0,0,0,0,0,0.254253650292766,0,0.689486746482929,0.291604613383254,0,0,0,0,0,0,0.219385397153973,0.10893846351899,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0.476809736941136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0.19566461893209,0,0,0,0,0,1.35291077473043,0.207376382794494,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,14.4468267276158,0.0967563312890851,0.0730893170861856,0.164230914106418,0,1.412098027064,0,0,0,0.126621591911757,0,0.160317640503067,0,0,0,0,0.171594997861965,0,0,0,0.407712618220842,0.523014231561666,0.509991088181609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0.0674035438541849,0.0984274815147488,0,0,0.136203406111576,2.25054407851027,1.51293380256957,3.73896304226267,0.899895566206002,0,0.182248669974074,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0.886068179966986,0.488105059607853,1.001527445652,0,0.110929051536852,0,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0,0.554805861502613,0,0.754703705257725,0,0,0,0,0,0.318593534327405,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0,0.489473409012935,0,0,0,0.176689145945881,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0.23658523500376,0,0.352675943690684,0,0.192687675289379,1.41696576325585,0.798169295285756,0.41023272848151,0,0.414943514785307,0.645902582527404,0,0,0.11796972334774,0,0,0,0,2.3869946653953,0,0,0,0,0,0,0.337687923091973,0.781078098613847,2.06686796501184,0.126831620387814,0,0,0,0,0.127762427639595,0.535701835878287,0,0,0,0,0,0.1714880094374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| |||
|short_description=p@chr2:175653511..175653516,+ | |||
}} |
Revision as of 06:43, 21 January 2014
Short description: | p@chr2:175653511..175653516, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:175653511..175653516, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.37e-21 | 23 |
embryonic stem cell | 8.85e-16 | 5 |
fibroblast | 4.08e-12 | 76 |
hair follicle cell | 6.15e-12 | 5 |
oligodendrocyte | 1.32e-11 | 7 |
macroglial cell | 1.32e-11 | 7 |
astrocyte | 1.32e-11 | 7 |
oligodendrocyte precursor cell | 1.32e-11 | 7 |
astrocyte of the cerebral cortex | 1.58e-10 | 3 |
fibroblast of periodontium | 1.37e-08 | 6 |
outer root sheath cell | 2.18e-08 | 2 |
ectodermal cell | 1.25e-07 | 72 |
neurectodermal cell | 2.70e-07 | 59 |
migratory neural crest cell | 7.25e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.00e-19 | 41 |
integument | 1.99e-19 | 46 |
integumental system | 1.99e-19 | 46 |
surface structure | 4.21e-13 | 99 |
hair follicle | 6.15e-12 | 5 |
hair follicle placode | 6.15e-12 | 5 |
dermis | 3.43e-09 | 9 |
dermatome | 3.43e-09 | 9 |
future dermis | 3.43e-09 | 9 |
periodontium | 1.37e-08 | 6 |
dentition | 1.37e-08 | 6 |
hair root sheath | 2.18e-08 | 2 |
hair outer root sheath | 2.18e-08 | 2 |
bulb of hair follicle | 2.18e-08 | 2 |
skull | 2.29e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.22e-11 | 5 |
myotonic disease | 3.22e-11 | 5 |
muscle tissue disease | 3.22e-11 | 5 |
myopathy | 3.22e-11 | 5 |
muscular disease | 3.22e-11 | 5 |
myotonic dystrophy | 3.22e-11 | 5 |