FFCP PHASE1:Hg19::chr2:185678747..185678752,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:185678747..185678752,+ | |||
|id=chr2:185678747..185678752,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.79e-15!42;CL:0000860!1.21e-14!45;CL:0002194!4.41e-12!63;CL:0000576!4.41e-12!63;CL:0000040!4.41e-12!63;CL:0000559!4.41e-12!63;CL:0002009!2.30e-11!65;CL:0000763!2.78e-11!112;CL:0000049!2.78e-11!112;CL:0000839!1.86e-10!70;CL:0000557!3.73e-10!71;CL:0000766!8.91e-09!76;CL:0000988!9.75e-09!182;CL:0002032!1.08e-07!165;CL:0000837!1.08e-07!165;CL:0000037!1.59e-07!172;CL:0000566!1.59e-07!172;CL:0002087!4.35e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002504;1.48e-07;3!CL:1000279;1.48e-07;3!CL:1000280;1.48e-07;3!CL:0000860;3.66e-07;33!CL:0002057;3.66e-07;33!CL:0000473;5.27e-07;39!CL:0000234;5.27e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,1.26e-07,3;CL:1000279,1.26e-07,3;CL:1000280,1.26e-07,3;CL:0000988,1.76e-07,177 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.48e-07;3 | |||
|ontology_enrichment_disease=DOID:2531!4.36e-07!51;DOID:0060083!4.36e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:12603;9.89e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,9.91e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002020!5.06e-12!34;UBERON:0003528!5.06e-12!34;UBERON:0001869!1.25e-10!32;UBERON:0001049!1.67e-10!57;UBERON:0005068!1.67e-10!57;UBERON:0006241!1.67e-10!57;UBERON:0007135!1.67e-10!57;UBERON:0002791!4.19e-10!33;UBERON:0002616!5.09e-10!59;UBERON:0000956!7.07e-10!25;UBERON:0000203!7.07e-10!25;UBERON:0001893!1.30e-09!34;UBERON:0000955!5.17e-09!69;UBERON:0006238!5.17e-09!69;UBERON:0002780!1.36e-08!41;UBERON:0001890!1.36e-08!41;UBERON:0006240!1.36e-08!41;UBERON:0002371!1.49e-08!80;UBERON:0002619!2.66e-08!22;UBERON:0003075!3.15e-08!86;UBERON:0007284!3.15e-08!86;UBERON:0003080!3.19e-08!42;UBERON:0002390!3.91e-08!102;UBERON:0003061!3.91e-08!102;UBERON:0002346!5.21e-08!90;UBERON:0004765!7.40e-08!101;UBERON:0001434!7.40e-08!101;UBERON:0001474!8.03e-08!86;UBERON:0001017!8.38e-08!82;UBERON:0000073!1.97e-07!94;UBERON:0001016!1.97e-07!94;UBERON:0005743!2.06e-07!86;UBERON:0001950!8.50e-07!20;UBERON:0002193!9.57e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;2.73e-08;49!UBERON:0002331;5.74e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.60e-08,10;UBERON:0000358,4.60e-08,10;UBERON:0000307,4.60e-08,10;UBERON:0000091,4.60e-08,10;UBERON:0000087,4.60e-08,10;UBERON:0007010,4.60e-08,10;UBERON:0007806,4.60e-08,10;UBERON:0008780,4.60e-08,10;UBERON:0005728,4.60e-08,10 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,2.24654881682875,3.41206157969812,0,0.553995408531877,0.200544447470142,0,0,0,0,0.581592955118259,1.88937971844405,0.727752183563449,0.232429036905685,1.23350366406548,0.309706370895104,0.28769239232215,0.512321413058201,0.236482229888585,0.344745680736619,0.645484683583826,0,0.564727018627814,0.818718450173537,0.898893937780338,0.612167784741805,0,1.27867425159808,0,0.398927315243264,0,1.7412554317715,0,2.4912889959823,1.00499466102697,1.0429658368404,0.217188844705117,0,1.10483290796269,0.949387162322653,0,0,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0.130059347559878,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,1.10864698731282,0.351339142772504,0,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0,0.491337269247072,0,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0.358779271377724,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,1.17002132569619,0,0,0,0,0,0,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0.229628896329213,0.364182336013434,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0.413509717453592,0.214840489736547,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0,0,0.94443704049192,0,0,0,0,0,0,0,0,0.762520775695299,0,0,0,0,1.61885211824983,2.47083326762449,0.706874414074119,0,1.58510321173008,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0.245040215981032,7.43212700502875,0,0,0,0.798317485731266,0,1.2700414963433,0.324621940274555,1.40398589056729,2.9670508274315,0,5.01268954180134,0,0.1605880751037,0.80719882876419,0,0,0.307240764308458,0.223676107892416,0.333698283423817,0.390776190804081,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0.556543525114529,0,0,0,0.276283915531148,0,0,0.738508832766417,0,0,0,0,0,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0.60298219312704,1.52581736317083,2.98564001814306,0.295547618953547,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.31396051279005,0.997270091400938,0,0.19606253431774,0,0,0.476809736941136,0.210998064528027,0,0,0,0,0,0,2.6686901581256,1.72989514525104,1.77517314159274,0,0,0,3.28418620588199,0,0,0,2.41981432097328,2.75465485467441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0.90392296312213,0.137041924646751,0.19871461170299,0.189932387867636,0,0,0.213452994739353,0,0,0,1.37275998289572,0,0.372757606696298,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0.169346664131569,2.38568906942791,0.544813624446302,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0.714695326373367,0,0.25426853765475,0,0,0,0,0.410462603746695,0,0,0,0,0.387848869084652,0.92562821219883,0,0,0,0,0,0,0,0.60896299190448,0,0,0,0,0,0,0,0.610131324509816,0.250381861413,0,0,0.0620964029413835,0,0.249960815924213,0,0,0,0.468334905806882,0.28984205722165,0,0.233713309847224,0,0,0,0.889811221596536,0,0,0.15543720058278,0,0,0,0.310525913752519,0,0,0.521745061811734,0,0,0.813741466409323,0,0.537052785212442,0,0,0,0,0,0,0,2.78774068787403,0,0,0,0.489473409012935,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0.414775308455192,0,0,0.163565394255844,0,0.245772908753719,0,0.59996218756479,1.38699248602383,0,0.567515953566836,0,0,0,0.255788742607303,1.07824811396682,0,0.436838552768056,0,0,0.495743057036009,0,0,0,0.80057074828547,0.352675943690684,0,0.128458450192919,0,0.798169295285756,0.82046545696302,5.5455773168778,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.826747186004736,0,4.37579847214576,0,0,0,0,0,0,0,0,0.0887023701626388,0.460935950223117,0,0.203909198930495,0.0657727735628491,0,0.111231401892069,0.078493092850514,0.785577949580009,0,0,0,0.47775168788705,0.0714765441766563,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,1.09279780251979,0.470317296361523,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0,0,0,0.730336388246517,0.458729283404541,0,0.946629373159108,0,4.36350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.20686599172379,0,0,0,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0.106727345877715,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p@chr2:185678747..185678752,+ | |||
}} |
Revision as of 07:25, 21 January 2014
Short description: | p@chr2:185678747..185678752, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:185678747..185678752, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 1.26e-07 | 3 |
smooth muscle cell of large intestine | 1.26e-07 | 3 |
smooth muscle cell of colon | 1.26e-07 | 3 |
hematopoietic cell | 1.76e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.60e-08 | 10 |
blastocyst | 4.60e-08 | 10 |
blastula | 4.60e-08 | 10 |
bilaminar disc | 4.60e-08 | 10 |
inner cell mass | 4.60e-08 | 10 |
cleaving embryo | 4.60e-08 | 10 |
connecting stalk | 4.60e-08 | 10 |
inner cell mass derived epiblast | 4.60e-08 | 10 |
extraembryonic mesoderm | 4.60e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 9.91e-07 | 1 |